##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062413_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 554176 Sequences flagged as poor quality 0 Sequence length 25 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.703435370712555 32.0 32.0 32.0 32.0 32.0 2 30.755754489548448 32.0 32.0 32.0 32.0 32.0 3 30.76328458828964 32.0 32.0 32.0 32.0 32.0 4 30.663572583439198 32.0 32.0 32.0 32.0 32.0 5 30.728613292528006 32.0 32.0 32.0 32.0 32.0 6 34.22172198002079 36.0 36.0 36.0 32.0 36.0 7 33.93740797147477 36.0 36.0 36.0 32.0 36.0 8 33.9232698637256 36.0 36.0 36.0 32.0 36.0 9 33.91340115775494 36.0 36.0 36.0 32.0 36.0 10 33.89928289929553 36.0 36.0 36.0 32.0 36.0 11 34.147996304423145 36.0 36.0 36.0 32.0 36.0 12 34.00276987816145 36.0 36.0 36.0 32.0 36.0 13 34.01833533029218 36.0 36.0 36.0 32.0 36.0 14 33.95369702044116 36.0 36.0 36.0 32.0 36.0 15 34.00763475863263 36.0 36.0 36.0 32.0 36.0 16 33.90798049717058 36.0 36.0 36.0 32.0 36.0 17 33.83703011317704 36.0 36.0 36.0 32.0 36.0 18 33.87703364995958 36.0 36.0 36.0 32.0 36.0 19 33.831223293682875 36.0 36.0 36.0 32.0 36.0 20 33.76443404261462 36.0 36.0 36.0 32.0 36.0 21 33.550231334449705 36.0 36.0 36.0 27.0 36.0 22 33.508749927820766 36.0 36.0 36.0 27.0 36.0 23 33.34927712495669 36.0 36.0 36.0 21.0 36.0 24 33.371520960849985 36.0 36.0 36.0 21.0 36.0 25 32.68770029737845 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 5.0 4 21.0 5 56.0 6 85.0 7 23.0 8 84.0 9 125.0 10 65.0 11 15.0 12 36.0 13 30.0 14 244.0 15 294.0 16 440.0 17 633.0 18 919.0 19 1251.0 20 1796.0 21 2440.0 22 3177.0 23 3989.0 24 4751.0 25 5805.0 26 7237.0 27 8793.0 28 11400.0 29 15018.0 30 19749.0 31 27961.0 32 40253.0 33 57092.0 34 119373.0 35 221016.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.74975186328118 16.114088751736958 13.935719055095374 21.20044032988649 2 11.100564466067071 23.792750003609118 38.232650969409114 26.874034560914694 3 20.9964053183964 31.055558763660514 26.51185956199743 21.436176355945662 4 12.069273569599327 18.282310009330562 33.17295111109507 36.47546530997504 5 11.158965620566287 40.350798023083286 33.43718524027336 15.053051116077071 6 31.04934215277076 31.42484221776115 21.321002007481116 16.204813621986975 7 25.58582146823283 33.003367672153054 23.328126833936746 18.08268402567737 8 30.618794848222684 29.646379722327076 23.44398227834841 16.290843151101825 9 28.110239491646965 17.52611396399407 18.363494818751118 36.00015172560785 10 16.385920032374386 29.415165376749698 32.24304637197303 21.955868218902886 11 33.63462268071037 23.993785116800055 18.91022745749851 23.461364744991055 12 21.885197619245517 26.68266364073302 30.212056273692806 21.22008246632866 13 33.487386379855785 21.877580222913192 24.667156890200168 19.967876507030855 14 26.567849664216116 19.560743729233703 25.097338481357085 28.774068125193097 15 26.978996925233677 24.250367635103643 31.45059598437686 17.320039455285816 16 25.241848508442793 25.347710862091706 29.6772282128592 19.7332124166063 17 22.656768031914606 24.820543581756784 31.77385871499629 20.748829671332324 18 25.998890573306184 20.730017219603244 35.17135583144665 18.09973637564393 19 20.94730964998979 33.720306229570994 27.212837502100495 18.119546618338724 20 21.44630294095329 21.39318583399278 38.04919294518098 19.11131827987295 21 22.670865811660036 28.531238820047484 23.613143829750328 25.184751538542155 22 20.195148928018273 29.89349762615191 26.696799868430805 23.214553577399013 23 19.04381562992987 28.501211629474493 25.928328638005592 26.52664410259005 24 18.273265079703517 32.82390057568672 26.97379595465338 21.929038389956382 25 25.35212285586769 25.265752246448958 24.31188101816132 25.070243879522035 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 328.0 1 328.0 2 843.5 3 1359.0 4 1359.0 5 1359.0 6 4070.5 7 6782.0 8 6782.0 9 6782.0 10 6223.5 11 5665.0 12 5665.0 13 5665.0 14 3865.0 15 2065.0 16 2065.0 17 2065.0 18 3373.5 19 4682.0 20 4682.0 21 4682.0 22 7541.0 23 10400.0 24 10400.0 25 10400.0 26 15472.5 27 20545.0 28 20545.0 29 20545.0 30 24795.0 31 29045.0 32 29045.0 33 29045.0 34 29459.0 35 29873.0 36 29873.0 37 29873.0 38 32058.0 39 34243.0 40 34243.0 41 34243.0 42 48626.0 43 63009.0 44 63009.0 45 63009.0 46 117045.0 47 171081.0 48 171081.0 49 171081.0 50 125111.0 51 79141.0 52 79141.0 53 79141.0 54 53772.0 55 28403.0 56 28403.0 57 28403.0 58 24601.0 59 20799.0 60 20799.0 61 20799.0 62 18920.0 63 17041.0 64 17041.0 65 17041.0 66 14800.5 67 12560.0 68 12560.0 69 12560.0 70 9874.0 71 7188.0 72 7188.0 73 7188.0 74 6068.0 75 4948.0 76 4948.0 77 4948.0 78 3811.0 79 2674.0 80 2674.0 81 2674.0 82 1975.0 83 1276.0 84 1276.0 85 1276.0 86 896.5 87 517.0 88 517.0 89 517.0 90 355.0 91 193.0 92 193.0 93 193.0 94 116.5 95 40.0 96 40.0 97 40.0 98 179.5 99 319.0 100 319.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00830061207991685 2 0.004330754128652269 3 0.004330754128652269 4 0.0149771913615891 5 0.03284155214227971 6 0.04475112599607345 7 0.06875072179235478 8 0.0907653886130038 9 0.09834420833814528 10 0.11765215382838665 11 0.12017842707010049 12 0.13317068945605728 13 0.12396783693267122 14 0.12541142164222197 15 0.11512588058667282 16 0.11314095161104054 17 0.12613321399699734 18 0.13299024136736343 19 0.13262934518997574 20 0.12306559648920198 21 0.1317271047465065 22 0.1542831158332371 23 0.14237354197944335 24 0.1353360665203834 25 0.1347947222543019 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 554176.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.791536696133946 #Duplication Level Percentage of deduplicated Percentage of total 1 75.60307154924833 20.255224657521264 2 12.890804717742247 6.907289352761758 3 4.121488367372724 3.3126302051146648 4 1.889928998822615 2.025364085001751 5 1.0486900889268185 1.4048009500177412 6 0.6844354425438802 1.1002246365029424 7 0.5019403480729147 0.9413427278266017 8 0.38821570207358697 0.8320716182495925 9 0.2950892232510247 0.7115304378027142 >10 2.069158124218049 11.066342135870556 >50 0.26672279593655557 5.057899282689564 >100 0.19667438488251066 10.452703127110956 >500 0.012797305865642816 2.4490994707147156 >1k 0.02357398448934203 13.437746115952898 >5k 0.005388339311849607 9.412034349656508 >10k+ 0.0020206272419436024 10.633696847205773 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 26103 4.710236459175424 No Hit TCCATGTACTCTGCGTTGATACCAC 21742 3.923302344381568 No Hit GAGTACATGGAAGCAGTGGTATCAA 11083 1.9999061669938791 No Hit CATGTACTCTGCGTTGATACCACTG 9495 1.713354602148054 No Hit GCTTCCATGTACTCTGCGTTGATAC 6708 1.2104457789583092 No Hit CCCATGTACTCTGCGTTGATACCAC 6452 1.1642510682526852 No Hit GTATCAACGCAGAGTACTTTTTTTT 6094 1.0996506525002887 No Hit GTACATGGGAAGCAGTGGTATCAAC 6092 1.099289756322901 No Hit GCGTTGATACCACTGCTTCCATGTA 6010 1.0844930130500057 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 5707 1.0298172421757708 No Hit CATGGAAGCAGTGGTATCAACGCAG 5600 1.0105092966855296 No Hit GTATCAACGCAGAGTACATGGAAGC 4661 0.8410685414020095 No Hit TATCAACGCAGAGTACTTTTTTTTT 4400 0.7939715902529161 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 4054 0.7315365515648458 No Hit ACTCTGCGTTGATACCACTGCTTCC 4008 0.7232359394849289 No Hit ACGCAGAGTACATGGAAGCAGTGGT 3724 0.671988682295877 No Hit CAGTGGTATCAACGCAGAGTACATG 3674 0.6629662778611849 No Hit TATCAACGCAGAGTACATGGAAGCA 3009 0.5429682988797783 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 2909 0.5249234900103937 No Hit GTATCAACGCAGAGTACATGGGAAG 2801 0.5054350964314586 No Hit GTACATGGGGTGGTATCAACGCAAA 2318 0.41827866959233173 No Hit ATACCACTGCTTCCATGTACTCTGC 2154 0.3886851830465412 No Hit GGTATCAACGCAGAGTACTTTTTTT 2125 0.3834521884744197 No Hit GGTATCAACGCAGAGTACATGGAAG 2086 0.3764147130153597 No Hit GAGTACATGGGAAGCAGTGGTATCA 2066 0.37280575124148285 No Hit AAGCAGTGGTATCAACGCAGAGTAC 1954 0.35259556530777225 No Hit GCGTTGATACCACTGCTTCCCATGT 1887 0.3405055433652847 No Hit GTACTCTGCGTTGATACCACTGCTT 1740 0.3139796743272895 No Hit GTGGTATCAACGCAGAGTACATGGA 1718 0.310009816376025 No Hit TATCAACGCAGAGTACATGGGAAGC 1712 0.3089271278438619 No Hit CCACTGCTTCCATGTACTCTGCGTT 1673 0.3018896523848019 No Hit GAAGCAGTGGTATCAACGCAGAGTA 1558 0.28113812218500983 No Hit AAAAAGTACTCTGCGTTGATACCAC 1499 0.270491684952073 No Hit GTACATGGGTGGTATCAACGCAAAA 1450 0.2616497286060746 No Hit ACATGGAAGCAGTGGTATCAACGCA 1428 0.25767987065481 No Hit GGTATCAACGCAGAGTACATGGGAA 1421 0.25641673403395315 No Hit GCTTCCCATGTACTCTGCGTTGATA 1414 0.2551535974130962 No Hit CTGCTTCCATGTACTCTGCGTTGAT 1376 0.2482965700427301 No Hit ACGCAGAGTACATGGGAAGCAGTGG 1343 0.24234178311583324 No Hit GTTGATACCACTGCTTCCATGTACT 1333 0.24053730222889477 No Hit TGGAAGCAGTGGTATCAACGCAGAG 1276 0.23025176117334564 No Hit GTACATGGGAGTGGTATCAACGCAA 1275 0.23007131308465179 No Hit GCAGAGTACTTTTTTTTTTTTTTTT 1243 0.2242969742464488 No Hit GATACCACTGCTTCCATGTACTCTG 1114 0.20101917080494283 No Hit GCAGAGTACATGGAAGCAGTGGTAT 1039 0.1874855641529045 No Hit CCCCATGTACTCTGCGTTGATACCA 1025 0.18495929091119068 No Hit GTATCAACGCAGAGTACATGGGGTG 968 0.17467374985564152 No Hit GCAGTGGTATCAACGCAGAGTACAT 949 0.17124523617045848 No Hit CTTCCATGTACTCTGCGTTGATACC 934 0.16853851484005083 No Hit CCATGTACTCTGCGTTGATACCACT 881 0.15897476613927705 No Hit GTGGTATCAACGCAGAGTACATGGG 776 0.14002771682642337 No Hit ATCAACGCAGAGTACATGGAAGCAG 753 0.13587741078646495 No Hit TATCAACGCAGAGTACATGGGGTGG 724 0.13064441621434347 No Hit ATCAACGCAGAGTACTTTTTTTTTT 723 0.13046396812564962 No Hit GTCCTACAGTGGACATTTCTAAATT 687 0.12396783693267122 No Hit TGATACCACTGCTTCCATGTACTCT 679 0.12252425222312045 No Hit CTGCTTCCCATGTACTCTGCGTTGA 679 0.12252425222312045 No Hit CACTGCTTCCATGTACTCTGCGTTG 676 0.12198290795703891 No Hit AAAGTACTCTGCGTTGATACCACTG 670 0.12090021942487586 No Hit GTCCTAAAGTGTGTATTTCTCATTT 629 0.11350184778842823 No Hit GTATCAACGCAGAGTACATGGGAGT 623 0.11241915925626515 No Hit CTGTAGGACGTGGAATATGGCAAGA 582 0.10502078761981752 No Hit CTTTAGGACGTGAAATATGGCGAGG 555 0.10014868922508373 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 1.8044808869384455E-4 0.0 4 0.0 0.0 0.0 1.8044808869384455E-4 0.0 5 0.0 0.0 0.0 1.8044808869384455E-4 0.0 6 0.0 0.0 0.0 1.8044808869384455E-4 0.0 7 0.0 0.0 0.0 3.608961773876891E-4 0.0 8 0.0 0.0 0.0 3.608961773876891E-4 0.0 9 0.0 0.0 0.0 3.608961773876891E-4 0.0 10 0.0 0.0 0.0 5.413442660815337E-4 0.0 11 0.0 0.0 0.0 5.413442660815337E-4 0.0 12 0.0 0.0 0.0 7.217923547753782E-4 0.0 13 0.0 0.0 0.0 7.217923547753782E-4 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATCGCC 30 7.7070063E-4 19.002619 15 CGCATCG 25 0.006025628 19.000902 13 AAGTGTC 30 7.711689E-4 19.000902 7 GCGTTAT 35 0.0021736845 16.279139 1 CGTTATT 35 0.0021736845 16.279139 2 TCCAACG 55 1.1232622E-5 15.549002 18 CGCCAGT 45 6.7409396E-4 14.781149 18 CTATGGA 45 6.7594287E-4 14.775811 4 ATCCCGT 65 3.361003E-6 14.616079 10 ACGGTAT 65 3.361003E-6 14.616079 9 ATCGCCA 40 0.0052686064 14.251964 16 TTTGCTT 40 0.0052717645 14.250678 10 TAGAGGC 40 0.005278085 14.248104 5 TAGCCCT 40 0.005278085 14.248104 4 TTTAGGC 40 0.005281247 14.246819 3 CCAACGA 55 1.9527852E-4 13.821335 19 GGTATCT 70 7.2388157E-6 13.572074 11 AGAACAG 130 1.4551915E-11 13.152097 5 ATACCAA 145 0.0 13.106437 19 AAAAAGT 175 0.0 13.023311 1 >>END_MODULE