##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062412_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1951611 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.25854640089649 32.0 32.0 32.0 32.0 32.0 2 31.297327182517417 32.0 32.0 32.0 32.0 32.0 3 31.413171989704917 32.0 32.0 32.0 32.0 32.0 4 31.549900056927328 32.0 32.0 32.0 32.0 32.0 5 31.442288447851546 32.0 32.0 32.0 32.0 32.0 6 35.04629149968923 36.0 36.0 36.0 36.0 36.0 7 35.06614791574756 36.0 36.0 36.0 36.0 36.0 8 34.99015018874151 36.0 36.0 36.0 36.0 36.0 9 35.15779988942469 36.0 36.0 36.0 36.0 36.0 10 35.001429588171 36.0 36.0 36.0 36.0 36.0 11 35.16309295243776 36.0 36.0 36.0 36.0 36.0 12 35.05913012377979 36.0 36.0 36.0 36.0 36.0 13 35.11841089233459 36.0 36.0 36.0 36.0 36.0 14 35.07476028778276 36.0 36.0 36.0 36.0 36.0 15 35.02001525918843 36.0 36.0 36.0 36.0 36.0 16 35.039930088526866 36.0 36.0 36.0 36.0 36.0 17 35.011456176461394 36.0 36.0 36.0 36.0 36.0 18 35.025691082905354 36.0 36.0 36.0 36.0 36.0 19 35.016725669203545 36.0 36.0 36.0 36.0 36.0 20 35.00765675126857 36.0 36.0 36.0 36.0 36.0 21 35.00689789102439 36.0 36.0 36.0 36.0 36.0 22 34.98541307668383 36.0 36.0 36.0 36.0 36.0 23 34.950405075601644 36.0 36.0 36.0 32.0 36.0 24 34.92543032397337 36.0 36.0 36.0 32.0 36.0 25 34.89835730583605 36.0 36.0 36.0 32.0 36.0 26 34.84706019795953 36.0 36.0 36.0 32.0 36.0 27 34.8322426959061 36.0 36.0 36.0 32.0 36.0 28 34.82004866748548 36.0 36.0 36.0 32.0 36.0 29 34.797198827020345 36.0 36.0 36.0 32.0 36.0 30 34.78757447052717 36.0 36.0 36.0 32.0 36.0 31 34.782209671906955 36.0 36.0 36.0 32.0 36.0 32 34.754131842872376 36.0 36.0 36.0 32.0 36.0 33 34.7310585972307 36.0 36.0 36.0 32.0 36.0 34 34.726914841123566 36.0 36.0 36.0 32.0 36.0 35 34.70882414579545 36.0 36.0 36.0 32.0 36.0 36 34.677478247458126 36.0 36.0 36.0 32.0 36.0 37 34.67634687445398 36.0 36.0 36.0 32.0 36.0 38 34.64020135160132 36.0 36.0 36.0 32.0 36.0 39 34.63622258739062 36.0 36.0 36.0 32.0 36.0 40 34.632369872889626 36.0 36.0 36.0 32.0 36.0 41 34.60079647019821 36.0 36.0 36.0 32.0 36.0 42 34.585266223648055 36.0 36.0 36.0 32.0 36.0 43 34.580086400414835 36.0 36.0 36.0 32.0 36.0 44 34.55104219027255 36.0 36.0 36.0 32.0 36.0 45 34.518520852772404 36.0 36.0 36.0 32.0 36.0 46 34.52636667860552 36.0 36.0 36.0 32.0 36.0 47 34.50490748412465 36.0 36.0 36.0 32.0 36.0 48 34.46593865273356 36.0 36.0 36.0 32.0 36.0 49 34.46429590732989 36.0 36.0 36.0 32.0 36.0 50 33.89832092563528 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 13.0 21 42.0 22 147.0 23 408.0 24 1135.0 25 2603.0 26 5562.0 27 10565.0 28 18162.0 29 29141.0 30 43253.0 31 64741.0 32 99144.0 33 170085.0 34 377548.0 35 1129059.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.498186659533225 18.06975710923243 11.547368491178766 26.88468774005558 2 16.554285506391608 20.296760050893063 36.139044848102245 27.009909594613084 3 18.492150803366055 23.67558737672301 28.801583930321822 29.030677889589114 4 12.761496306885872 15.665926250445148 35.75503239641218 35.8175450462568 5 14.837178105677824 36.13870796997967 33.37519618407562 15.648917740266889 6 34.80890363684902 35.25381903221294 16.307432797689287 13.629844533248752 7 30.379363510453672 30.292307227208703 20.79461532036866 18.53371394196897 8 28.22217132410096 32.779431966718775 19.37922055163657 19.61917615754369 9 27.54698554168838 13.982243387642313 18.398236123899693 40.072534946769615 10 15.950002331407232 26.52711016693388 31.5956919693525 25.927195532306385 11 37.801488103930545 20.86522365368918 22.114191813839952 19.21909642854032 12 24.550076833959224 23.509551852290237 28.52535674373633 23.415014570014208 13 29.512284978922544 19.12814592662165 25.19938655807945 26.160182536376357 14 23.499355148131468 19.424413984139257 24.72101253784694 32.35521832988234 15 25.36417349564027 26.95890728224016 21.876593235024806 25.800325987094762 16 26.09951470861765 25.459991770901063 23.3810938757775 25.059399644703785 17 24.41393289953787 25.586348918918784 24.89158956369891 25.10812861784444 18 25.238226265377676 24.672949681058366 25.671765531143247 24.417058522420707 19 25.8096003763045 24.856439116196825 24.89594493984713 24.438015567651544 20 25.766610251735617 24.337944395681312 24.614536400952854 25.280908951630217 21 26.855249329912567 24.13754585314389 24.093633413625973 24.913571403317565 22 25.936623640674295 24.268565815626168 24.489972643113816 25.30483790058572 23 24.875910209565326 23.994535796324165 25.050637652687957 26.07891634142255 24 25.09649720154273 24.852083740048606 24.727724941087132 25.323694117321537 25 25.191239442696318 24.322111322389553 24.918541656098476 25.568107578815656 26 24.911521814541935 24.871811032014065 25.30596517441232 24.910701979031682 27 25.547509211620557 24.688321596875607 24.46132963997436 25.302839551529484 28 24.90742263699067 24.527121439672147 25.12570384159548 25.4397520817417 29 24.961583020386747 24.681711673074194 24.96368384888177 25.393021457657287 30 24.849982911553585 24.815344861245404 25.209788221115787 25.124884006085228 31 25.277373410992254 24.599625642610132 24.426486630788617 25.696514315609004 32 25.024761594395606 24.642769486337183 24.50170653885431 25.830762380412896 33 24.822262223363158 24.336304724660806 24.965169800744103 25.87626325123193 34 25.36371233816575 24.403941154256664 25.259234550327907 24.973111957249678 35 25.829122709392394 24.336663402696544 24.98540948990347 24.848804398007594 36 24.903835856633314 24.806070472035664 24.71537616871395 25.574717502617066 37 25.674942393745475 24.514618948140793 24.586508274446086 25.223930383667646 38 24.937654071431243 24.399483298669665 25.126677396263908 25.536185233635187 39 25.392150382427648 24.292546004301062 24.555918161969778 25.759385451301515 40 25.596853061393894 24.377860137086746 25.18898489504312 24.836301906476237 41 24.658038922715644 24.601931429982717 25.534853000931022 25.205176646370614 42 25.59982496511856 24.844500261578766 24.94764581671245 24.60802895659022 43 24.82605396259808 23.96671262869496 25.303813106197904 25.903420302509055 44 24.603519861283832 24.45733294186188 25.143176585907746 25.795970610946544 45 24.703334834657113 24.58297273380812 25.27532382221662 25.438368609318147 46 24.628524082973673 24.262108098607968 25.373704849388222 25.735662969030138 47 24.74289189802681 24.174131012788923 25.604692738460688 25.47828435072358 48 25.247141976551678 24.837121741986493 24.935297044339265 24.98043923712256 49 24.364537810045135 24.77983573570758 25.19129068241571 25.66433577183158 50 24.18668474403967 24.957535082554873 25.20753367346259 25.648246499942868 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 7.0 1 9.0 2 11.0 3 54.5 4 98.0 5 121.0 6 144.0 7 157.5 8 171.0 9 250.5 10 330.0 11 458.0 12 586.0 13 1052.5 14 1519.0 15 1984.5 16 2450.0 17 2989.0 18 3528.0 19 3933.5 20 4339.0 21 5415.0 22 6491.0 23 7367.5 24 8244.0 25 10419.0 26 12594.0 27 15989.0 28 19384.0 29 22137.0 30 24890.0 31 27019.5 32 29149.0 33 33705.0 34 38261.0 35 44965.0 36 51669.0 37 61755.5 38 71842.0 39 77606.5 40 83371.0 41 91367.5 42 99364.0 43 102059.0 44 104754.0 45 114083.5 46 123413.0 47 131634.5 48 139856.0 49 144617.5 50 149379.0 51 146049.5 52 142720.0 53 140564.0 54 138408.0 55 139380.5 56 140353.0 57 137071.5 58 133790.0 59 123072.5 60 112355.0 61 99289.0 62 86223.0 63 75535.5 64 64848.0 65 55693.0 66 46538.0 67 40337.5 68 34137.0 69 30526.5 70 26916.0 71 21380.5 72 15845.0 73 14325.0 74 12805.0 75 9609.0 76 6413.0 77 5774.5 78 5136.0 79 4463.0 80 3790.0 81 3046.5 82 2303.0 83 1950.0 84 1597.0 85 1273.0 86 949.0 87 687.0 88 425.0 89 286.5 90 148.0 91 92.0 92 36.0 93 27.0 94 18.0 95 11.5 96 5.0 97 5.0 98 5.0 99 4.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.012297532653792175 2 0.0034843009185744496 3 5.123971939080073E-4 4 3.0743831634480435E-4 5 0.0 6 2.0495887756320292E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.0495887756320292E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1951611.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.033316320537445 #Duplication Level Percentage of deduplicated Percentage of total 1 81.31901021750613 47.192118428255505 2 11.421196568919287 13.256198264862599 3 3.0946850861810713 5.387845155563873 4 1.3153015620256412 3.053252464237241 5 0.7139463748034317 2.071633790243427 6 0.44661918216624913 1.5551275364084203 7 0.3092630976273483 1.2563294219614012 8 0.22024201119844378 1.022509944236051 9 0.16778281005865636 0.8763293600354389 >10 0.8493924495595868 8.737831857426768 >50 0.06624675260359766 2.657145209087589 >100 0.0665655461064301 8.281229659227765 >500 0.007621430427419425 2.981389569355923 >1k 0.002126910816954258 1.671059339098027 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.123971939080073E-5 2 0.0 0.0 0.0 0.0 5.123971939080073E-5 3 0.0 0.0 0.0 0.0 5.123971939080073E-5 4 0.0 0.0 0.0 0.0 5.123971939080073E-5 5 5.123971939080073E-5 0.0 0.0 0.0 5.123971939080073E-5 6 5.123971939080073E-5 0.0 0.0 0.0 5.123971939080073E-5 7 5.123971939080073E-5 0.0 0.0 1.0247943878160146E-4 5.123971939080073E-5 8 5.123971939080073E-5 0.0 0.0 1.0247943878160146E-4 5.123971939080073E-5 9 5.123971939080073E-5 0.0 0.0 1.0247943878160146E-4 5.123971939080073E-5 10 5.123971939080073E-5 0.0 0.0 1.0247943878160146E-4 5.123971939080073E-5 11 5.123971939080073E-5 0.0 0.0 1.0247943878160146E-4 5.123971939080073E-5 12 5.123971939080073E-5 0.0 0.0 1.5371915817240217E-4 1.0247943878160146E-4 13 5.123971939080073E-5 0.0 0.0 1.5371915817240217E-4 1.0247943878160146E-4 14 5.123971939080073E-5 0.0 0.0 1.5371915817240217E-4 1.0247943878160146E-4 15 5.123971939080073E-5 0.0 0.0 2.5619859695400366E-4 1.0247943878160146E-4 16 5.123971939080073E-5 0.0 0.0 2.5619859695400366E-4 1.0247943878160146E-4 17 5.123971939080073E-5 0.0 0.0 3.0743831634480435E-4 1.0247943878160146E-4 18 5.123971939080073E-5 0.0 0.0 3.0743831634480435E-4 1.0247943878160146E-4 19 5.123971939080073E-5 0.0 0.0 3.0743831634480435E-4 1.5371915817240217E-4 20 5.123971939080073E-5 0.0 0.0 7.173560714712102E-4 1.5371915817240217E-4 21 5.123971939080073E-5 0.0 0.0 8.710752296436124E-4 1.5371915817240217E-4 22 5.123971939080073E-5 0.0 0.0 0.0011785135459884168 1.5371915817240217E-4 23 5.123971939080073E-5 0.0 0.0 0.0015884313011148225 1.5371915817240217E-4 24 5.123971939080073E-5 0.0 0.0 0.002203307933804431 1.5371915817240217E-4 25 5.123971939080073E-5 0.0 0.0 0.002613225688930837 1.5371915817240217E-4 26 5.123971939080073E-5 0.0 0.0 0.0034330611991836486 1.5371915817240217E-4 27 5.123971939080073E-5 0.0 0.0 0.005072732219689272 1.5371915817240217E-4 28 5.123971939080073E-5 0.0 0.0 0.012143813495619772 1.5371915817240217E-4 29 5.123971939080073E-5 0.0 0.0 0.024338866710630347 1.5371915817240217E-4 30 5.123971939080073E-5 0.0 0.0 0.049087651176387095 1.5371915817240217E-4 31 5.123971939080073E-5 0.0 0.0 0.10709101352677353 1.5371915817240217E-4 32 5.123971939080073E-5 0.0 0.0 0.17482992256141208 1.5371915817240217E-4 33 5.123971939080073E-5 0.0 0.0 0.2465142899891423 1.5371915817240217E-4 34 5.123971939080073E-5 0.0 0.0 0.324757341498895 1.5371915817240217E-4 35 5.123971939080073E-5 0.0 0.0 0.410378912600923 1.5371915817240217E-4 36 5.123971939080073E-5 0.0 0.0 0.5365311017410744 1.5371915817240217E-4 37 5.123971939080073E-5 0.0 0.0 0.7208403723897846 1.5371915817240217E-4 38 5.123971939080073E-5 0.0 0.0 0.9618207726847204 1.5371915817240217E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2700 0.0 20.453888 1 TATACCG 65 4.9337547E-4 20.307632 5 TAACGGC 280 0.0 19.642801 36 TTAACGG 285 0.0 18.526262 35 GGCGTTA 355 0.0 17.352062 42 ACTATAC 185 4.2382453E-10 16.6486 3 GTTATAT 295 0.0 16.408413 1 ATACCGT 535 0.0 16.037336 6 GTATAGG 275 0.0 16.001593 1 TACGCTA 525 0.0 15.923762 9 GGTATCA 1480 0.0 15.758326 1 ACGCTAT 535 0.0 15.626123 10 AACGCAG 3570 0.0 15.406117 6 CGTACAC 100 4.9457385E-4 15.399955 3 ATACGCT 545 0.0 15.339405 8 CAACGGA 290 0.0 15.172371 14 ACCGTCG 495 0.0 15.111066 8 GTATTAG 670 0.0 15.105981 1 GCGAAAG 760 0.0 15.0525875 18 AACGGAC 280 0.0 14.928529 15 >>END_MODULE