##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062411_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1872168 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.201561505164065 32.0 32.0 32.0 32.0 32.0 2 31.363865315505873 32.0 32.0 32.0 32.0 32.0 3 31.468034385802984 32.0 32.0 32.0 32.0 32.0 4 31.583978040432267 32.0 32.0 32.0 32.0 32.0 5 31.502457578593376 32.0 32.0 32.0 32.0 32.0 6 35.09598070258652 36.0 36.0 36.0 36.0 36.0 7 35.10948483255776 36.0 36.0 36.0 36.0 36.0 8 35.05066158592605 36.0 36.0 36.0 36.0 36.0 9 35.17886909721777 36.0 36.0 36.0 36.0 36.0 10 35.05400102982211 36.0 36.0 36.0 36.0 36.0 11 35.19846829985343 36.0 36.0 36.0 36.0 36.0 12 35.09704310724251 36.0 36.0 36.0 36.0 36.0 13 35.14737993598865 36.0 36.0 36.0 36.0 36.0 14 35.1112245268587 36.0 36.0 36.0 36.0 36.0 15 35.061697988642045 36.0 36.0 36.0 36.0 36.0 16 35.08074702697621 36.0 36.0 36.0 36.0 36.0 17 35.06133530751514 36.0 36.0 36.0 36.0 36.0 18 35.073945286961425 36.0 36.0 36.0 36.0 36.0 19 35.05452448711868 36.0 36.0 36.0 36.0 36.0 20 35.03406638720457 36.0 36.0 36.0 36.0 36.0 21 35.01961095371783 36.0 36.0 36.0 36.0 36.0 22 35.005998393306584 36.0 36.0 36.0 36.0 36.0 23 34.968471846543686 36.0 36.0 36.0 36.0 36.0 24 34.9543262143141 36.0 36.0 36.0 36.0 36.0 25 34.92099587216532 36.0 36.0 36.0 32.0 36.0 26 34.883156853444774 36.0 36.0 36.0 32.0 36.0 27 34.859542519688404 36.0 36.0 36.0 32.0 36.0 28 34.83794456480401 36.0 36.0 36.0 32.0 36.0 29 34.81747738450823 36.0 36.0 36.0 32.0 36.0 30 34.793786134577665 36.0 36.0 36.0 32.0 36.0 31 34.792028813653474 36.0 36.0 36.0 32.0 36.0 32 34.74856316313493 36.0 36.0 36.0 32.0 36.0 33 34.724801940851464 36.0 36.0 36.0 32.0 36.0 34 34.700008225757514 36.0 36.0 36.0 32.0 36.0 35 34.6649387234479 36.0 36.0 36.0 32.0 36.0 36 34.62566874340337 36.0 36.0 36.0 32.0 36.0 37 34.6097251956021 36.0 36.0 36.0 32.0 36.0 38 34.56655065143726 36.0 36.0 36.0 32.0 36.0 39 34.532082056738496 36.0 36.0 36.0 32.0 36.0 40 34.522462727703925 36.0 36.0 36.0 32.0 36.0 41 34.48678110084138 36.0 36.0 36.0 32.0 36.0 42 34.45091679806513 36.0 36.0 36.0 32.0 36.0 43 34.433383649330615 36.0 36.0 36.0 32.0 36.0 44 34.3984204409006 36.0 36.0 36.0 32.0 36.0 45 34.33410569991582 36.0 36.0 36.0 32.0 36.0 46 34.33175975660304 36.0 36.0 36.0 32.0 36.0 47 34.30145424983228 36.0 36.0 36.0 32.0 36.0 48 34.25273266074412 36.0 36.0 36.0 32.0 36.0 49 34.21139128539746 36.0 36.0 36.0 32.0 36.0 50 33.69227441127078 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 17.0 21 53.0 22 177.0 23 505.0 24 1365.0 25 3136.0 26 6578.0 27 12212.0 28 20571.0 29 31426.0 30 44788.0 31 64450.0 32 94572.0 33 152844.0 34 332460.0 35 1107011.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.42158474309613 18.58002112306993 11.86684880016796 26.131545333665972 2 15.801632815270947 20.98147325148603 37.39583912004888 25.821054813194138 3 18.41597686518812 25.078238630627663 28.872738771374408 27.6330457328098 4 12.157447997260919 16.225474197998995 36.64348311924028 34.973594685499805 5 13.86536891988326 37.466242345772386 33.74205733673474 14.926331397609616 6 33.37147105859429 36.112847071994835 17.18553202126739 13.330149848143483 7 29.378773699796174 30.927779985556853 21.43632409057307 18.257122224073907 8 27.681009396592614 33.5722007853996 19.86814217527487 18.87864764273292 9 27.595279910777236 14.067327291140538 19.02927515052068 39.30811764756154 10 15.748746907328828 27.141634725088775 32.14433747398738 24.96528089359502 11 36.85166074839438 21.192649377619958 22.971976873870297 18.983713000115372 12 24.493581772575965 24.081332444524207 29.418246653078146 22.00683912982168 13 29.696052918327844 20.002211340007946 25.522121946321057 24.779613795343153 14 23.091677669952695 20.4081044008871 25.602990757239734 30.897227171920466 15 24.675082578059236 28.268029364886054 22.919631144213554 24.137256912841153 16 24.97900829412745 25.898423645741193 25.1826224996902 23.939945560441156 17 23.407942022297142 26.35671585028694 26.138038893945414 24.0973032334705 18 24.088116023775644 24.901664807859124 27.926019459792066 23.08419970857316 19 25.1826224996902 25.440238269215154 25.91920169557433 23.45793753552032 20 25.179524487118677 24.67027531717239 26.29342024861017 23.856779947098765 21 26.00834967802035 24.679248870827834 24.867426427542828 24.444975023608993 22 25.19565551809453 25.475491515718673 25.376408527439846 23.95244443874695 23 23.57202986056807 25.14801022130493 26.262066224825976 25.01789369330103 24 24.25081509779037 25.64780511150709 26.035964721114773 24.06541506958777 25 24.310478546797082 25.165903914605952 26.212391195661926 24.311226342935036 26 23.369911247281227 26.03788762546951 26.787019113669285 23.80518201357998 27 24.52012853547331 25.77087099021028 25.779470645796742 23.929529828519662 28 23.565780421415173 25.47949756645771 26.36649061409019 24.58823139803693 29 23.836055311275484 25.57703154845078 26.138145721965124 24.448767418308613 30 23.9181526444208 25.51031745014336 26.600978117348443 23.970551788087395 31 24.32009306857077 25.264292520756683 25.736899679943253 24.678714730729293 32 23.811004140654042 25.86199529102089 25.809916631413422 24.517083936911643 33 23.41280269719384 25.382444310553325 26.56802167326864 24.636731318984193 34 23.99581661474825 25.69245922374488 26.789956884211247 23.521767277295627 35 24.822558659265624 25.50246559069485 26.164318586793495 23.510657163246034 36 23.52155362125621 25.894791493071136 26.309604693595873 24.27405019207678 37 24.775287260544992 25.606088769811258 25.3911507941595 24.227473175484253 38 23.85811529734511 25.89169348049961 25.852113699197936 24.398077522957344 39 24.492673734408452 25.33084637703454 25.553582798124953 24.622897090432055 40 24.985845287388738 25.35840800611911 26.170728267975953 23.4850184385162 41 23.808920994269744 25.55951175321873 26.702945462159377 23.928621790352146 42 24.81652287615214 26.259075040274166 25.982390469231394 22.942011614342302 43 23.699689344118692 25.34008700073925 26.312809534187103 24.64741412095496 44 23.345554458787888 25.847626922370214 26.173986522577035 24.632832096264863 45 23.594036432627842 26.029020899833778 26.082862221766423 24.29408044577196 46 23.483815003584084 25.254331079615806 26.32864820747733 24.933205709322785 47 24.19889668021246 25.14608731695019 26.387001593874054 24.2680144089633 48 24.100134175992753 26.247484200135883 25.495361527384297 24.157020096487066 49 23.553334957119233 25.831175407335238 26.08473171211131 24.530757923434223 50 23.166362829811657 26.81790673588414 25.422571811168552 24.59315862313565 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 73.0 1 78.5 2 84.0 3 273.5 4 463.0 5 501.5 6 540.0 7 491.5 8 443.0 9 591.5 10 740.0 11 1051.0 12 1362.0 13 2407.5 14 3453.0 15 4570.0 16 5687.0 17 6672.0 18 7657.0 19 8335.5 20 9014.0 21 10511.0 22 12008.0 23 12781.0 24 13554.0 25 15437.0 26 17320.0 27 21280.0 28 25240.0 29 29315.0 30 33390.0 31 36763.0 32 40136.0 33 47230.0 34 54324.0 35 62621.5 36 70919.0 37 78793.0 38 86667.0 39 88946.0 40 91225.0 41 96100.0 42 100975.0 43 101076.5 44 101178.0 45 110543.5 46 119909.0 47 126625.0 48 133341.0 49 134380.5 50 135420.0 51 127717.5 52 120015.0 53 116590.0 54 113165.0 55 114308.0 56 115451.0 57 112751.5 58 110052.0 59 100136.5 60 90221.0 61 79881.0 62 69541.0 63 60933.0 64 52325.0 65 45414.0 66 38503.0 67 34541.5 68 30580.0 69 27921.0 70 25262.0 71 19824.5 72 14387.0 73 12722.0 74 11057.0 75 8191.5 76 5326.0 77 4681.0 78 4036.0 79 3456.0 80 2876.0 81 2303.5 82 1731.0 83 1477.0 84 1223.0 85 1004.5 86 786.0 87 561.0 88 336.0 89 214.5 90 93.0 91 65.0 92 37.0 93 27.0 94 17.0 95 16.0 96 15.0 97 10.5 98 6.0 99 5.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015009336768922446 2 0.0034184966306442586 3 5.875541083919819E-4 4 3.738980689767158E-4 5 0.0 6 3.2048405912289923E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.0682801970763308E-4 47 0.0 48 0.0 49 0.0 50 5.341400985381654E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1872168.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.745392208923164 #Duplication Level Percentage of deduplicated Percentage of total 1 78.00157068583032 42.70226580107824 2 13.50035345624822 14.781642898428004 3 4.037701495323472 6.631366559521171 4 1.631696234613866 3.5731140131903683 5 0.8224968949083964 2.251395755119081 6 0.4604980298167886 1.512608715225389 7 0.2809399614739696 1.076611786463656 8 0.19588434642640212 0.8579012298161569 9 0.1381737391780108 0.6807937989846287 >10 0.749827816721436 7.549730699828965 >50 0.08460185421190086 3.257931886374327 >100 0.08459197488173849 9.838467555665401 >500 0.008919154985383473 3.2604938998650965 >1k 0.0027443553801179917 2.025675400439515 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 5.341400985381654E-5 0.0 11 0.0 0.0 0.0 1.6024202956144962E-4 0.0 12 0.0 0.0 0.0 1.6024202956144962E-4 2.1365603941526616E-4 13 0.0 0.0 0.0 1.6024202956144962E-4 2.1365603941526616E-4 14 0.0 0.0 0.0 2.1365603941526616E-4 2.1365603941526616E-4 15 0.0 0.0 0.0 2.1365603941526616E-4 2.1365603941526616E-4 16 0.0 0.0 0.0 3.2048405912289923E-4 2.1365603941526616E-4 17 0.0 0.0 0.0 3.2048405912289923E-4 2.1365603941526616E-4 18 0.0 0.0 0.0 5.341400985381654E-4 2.1365603941526616E-4 19 0.0 0.0 0.0 6.409681182457985E-4 2.1365603941526616E-4 20 0.0 0.0 0.0 8.546241576610647E-4 2.1365603941526616E-4 21 0.0 0.0 0.0 0.0010148661872225143 2.670700492690827E-4 22 0.0 0.0 0.0 0.0015490062857606796 2.670700492690827E-4 23 5.341400985381654E-5 0.0 0.0 0.003578738660205708 2.670700492690827E-4 24 5.341400985381654E-5 0.0 0.0 0.006463095192311801 2.670700492690827E-4 25 5.341400985381654E-5 0.0 0.0 0.00801210147807248 2.670700492690827E-4 26 5.341400985381654E-5 0.0 0.0 0.01094987202003239 3.2048405912289923E-4 27 5.341400985381654E-5 0.0 0.0 0.014101298601407566 3.738980689767158E-4 28 5.341400985381654E-5 0.0 0.0 0.022273642109041498 3.738980689767158E-4 29 5.341400985381654E-5 0.0 0.0 0.036642010759718145 3.738980689767158E-4 30 5.341400985381654E-5 0.0 0.0 0.06372291375560313 3.738980689767158E-4 31 1.0682801970763308E-4 0.0 0.0 0.12151687241743263 3.738980689767158E-4 32 1.0682801970763308E-4 0.0 0.0 0.18710927651791934 3.738980689767158E-4 33 1.0682801970763308E-4 0.0 0.0 0.2511526743326454 3.738980689767158E-4 34 1.0682801970763308E-4 0.0 0.0 0.32368889971412823 4.2731207883053233E-4 35 1.0682801970763308E-4 0.0 0.0 0.41422564641634724 4.2731207883053233E-4 36 1.0682801970763308E-4 0.0 0.0 0.5373449391293944 4.2731207883053233E-4 37 1.0682801970763308E-4 0.0 0.0 0.7095517068980989 4.2731207883053233E-4 38 1.0682801970763308E-4 0.0 0.0 0.9400331594173172 4.2731207883053233E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGAAC 90 4.084468E-7 21.999895 12 TAGGACG 1340 0.0 19.701397 4 TGTAGGA 1595 0.0 19.173346 2 GTAGGAC 1695 0.0 18.690174 3 AGGACGT 1425 0.0 18.680613 5 GTCCTAC 1395 0.0 18.454481 1 CTGTAGG 1650 0.0 18.269505 1 GGACGTG 1425 0.0 18.06307 6 ACGCGAA 110 2.7982187E-6 17.999912 11 AACCGGT 210 0.0 17.809437 7 GTCCTAA 805 0.0 17.766735 1 CGTCTTA 285 0.0 17.7543 15 GTAAGAC 150 9.606083E-9 17.599915 3 TAGGACA 565 0.0 17.52204 4 CGTGGAA 865 0.0 17.294714 9 ATACGAA 560 0.0 17.285631 40 ACGTGGA 880 0.0 16.999916 8 GTATACC 130 7.322451E-7 16.922995 3 GACGTGG 905 0.0 16.773401 7 TTAGGAC 840 0.0 16.761824 3 >>END_MODULE