##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062409_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 912888 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.086375327531965 32.0 32.0 32.0 32.0 32.0 2 30.876964096362315 32.0 32.0 32.0 32.0 32.0 3 30.877947787680416 32.0 32.0 32.0 32.0 32.0 4 30.893351648833153 32.0 32.0 32.0 32.0 32.0 5 30.77408948304721 32.0 32.0 32.0 32.0 32.0 6 34.37620934879197 36.0 36.0 36.0 32.0 36.0 7 34.22264176985567 36.0 36.0 36.0 32.0 36.0 8 34.22178514779469 36.0 36.0 36.0 32.0 36.0 9 34.33165185652566 36.0 36.0 36.0 32.0 36.0 10 34.107542217665255 36.0 36.0 36.0 32.0 36.0 11 34.37890409338276 36.0 36.0 36.0 32.0 36.0 12 34.19140245024581 36.0 36.0 36.0 32.0 36.0 13 34.27422422027675 36.0 36.0 36.0 32.0 36.0 14 34.19729035763423 36.0 36.0 36.0 32.0 36.0 15 34.168353620597486 36.0 36.0 36.0 32.0 36.0 16 34.1392459973184 36.0 36.0 36.0 32.0 36.0 17 34.056414368465795 36.0 36.0 36.0 32.0 36.0 18 34.077510055998104 36.0 36.0 36.0 32.0 36.0 19 34.05800163875525 36.0 36.0 36.0 32.0 36.0 20 34.04319259317682 36.0 36.0 36.0 32.0 36.0 21 33.96020431860206 36.0 36.0 36.0 32.0 36.0 22 33.92137480172814 36.0 36.0 36.0 32.0 36.0 23 33.84777322081131 36.0 36.0 36.0 32.0 36.0 24 33.82705764562575 36.0 36.0 36.0 32.0 36.0 25 33.271227138487966 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 6.0 4 27.0 5 95.0 6 136.0 7 33.0 8 134.0 9 178.0 10 106.0 11 34.0 12 60.0 13 53.0 14 200.0 15 276.0 16 409.0 17 608.0 18 834.0 19 1154.0 20 1669.0 21 2186.0 22 2972.0 23 4025.0 24 5324.0 25 7215.0 26 9729.0 27 12642.0 28 17511.0 29 23858.0 30 31625.0 31 44177.0 32 65176.0 33 95432.0 34 210508.0 35 374496.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.96272048746339 16.565057016433922 11.433961396001564 25.038261100101117 2 15.594210709661304 20.61218721860355 36.412344526750054 27.38125754498509 3 20.152159981596203 24.699322455373526 27.6895016185484 27.459015944481873 4 12.63813857077592 15.451142193849213 34.84504706051201 37.06567217486286 5 13.803313251031692 37.00363147040582 33.6678070258104 15.525248252752094 6 34.43096514010806 33.868450756704036 17.288468071582777 14.412116031605132 7 29.42513112534871 30.868523887558304 20.863974920393076 18.842370066699914 8 29.390656640131212 31.636650283462686 20.393635437714405 18.579057638691697 9 27.483325712995033 14.91426297074777 18.24780462987633 39.35460668638087 10 16.32699613100199 26.994705350797926 31.506562382109614 25.171736136090473 11 37.379475526622855 21.596033549451224 20.289456137426413 20.735034786499504 12 23.43331154330439 24.461025827765177 28.88721685758534 23.21844577134509 13 30.83836439706745 19.411516337933946 24.825873102041488 24.924246162957115 14 24.380279944682247 19.466936017187546 24.338166508192927 31.814617529937276 15 26.333029568291757 25.463625507051844 24.724939109913596 23.478405814742803 16 26.675900307385923 25.383848585838315 24.58550055215417 23.35475055462159 17 23.86955615753282 25.459251379125035 26.697009245347164 23.974183217994977 18 25.789041327263096 23.24684597338586 28.338036634198723 22.626076065152326 19 24.75291614339693 27.67295321557251 24.91228262598233 22.661848015048232 20 24.02400854534009 23.32103588121626 28.644107202782937 24.010848370660707 21 25.922509730976472 25.09040019566145 23.5588887219381 25.428201351423972 22 23.800251649047212 25.801706255135276 25.1000727303044 25.29796936551311 23 22.692726608628124 25.2114472744663 25.372795447590363 26.723030669315218 24 22.929753267194243 27.678715388032444 24.86061982088701 24.530911523886303 25 25.199561283246503 24.73890869207568 24.125253633123116 25.936276391554703 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 157.0 1 157.0 2 435.5 3 714.0 4 714.0 5 714.0 6 2184.5 7 3655.0 8 3655.0 9 3655.0 10 3654.0 11 3653.0 12 3653.0 13 3653.0 14 2990.5 15 2328.0 16 2328.0 17 2328.0 18 3651.0 19 4974.0 20 4974.0 21 4974.0 22 8260.0 23 11546.0 24 11546.0 25 11546.0 26 17228.5 27 22911.0 28 22911.0 29 22911.0 30 28576.5 31 34242.0 32 34242.0 33 34242.0 34 40641.5 35 47041.0 36 47041.0 37 47041.0 38 54756.0 39 62471.0 40 62471.0 41 62471.0 42 81543.0 43 100615.0 44 100615.0 45 100615.0 46 137809.5 47 175004.0 48 175004.0 49 175004.0 50 152727.0 51 130450.0 52 130450.0 53 130450.0 54 112356.5 55 94263.0 56 94263.0 57 94263.0 58 86207.0 59 78151.0 60 78151.0 61 78151.0 62 69290.0 63 60429.0 64 60429.0 65 60429.0 66 49450.5 67 38472.0 68 38472.0 69 38472.0 70 28808.0 71 19144.0 72 19144.0 73 19144.0 74 14912.0 75 10680.0 76 10680.0 77 10680.0 78 8872.0 79 7064.0 80 7064.0 81 7064.0 82 4825.0 83 2586.0 84 2586.0 85 2586.0 86 1965.5 87 1345.0 88 1345.0 89 1345.0 90 904.5 91 464.0 92 464.0 93 464.0 94 276.0 95 88.0 96 88.0 97 88.0 98 264.5 99 441.0 100 441.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00887293950627021 2 0.0032862738912111888 3 0.003614901280332308 4 0.013911892806127367 5 0.03395816354251562 6 0.04140705102926098 7 0.06495868058294117 8 0.08489540885628905 9 0.09365880589951889 10 0.11217148215334193 11 0.1139241615619879 12 0.12663108727467115 13 0.11534821358151273 14 0.11666272313799722 15 0.10943292057733259 16 0.11009017535557485 17 0.11808677515752206 18 0.12235893121609662 19 0.12630245988555003 20 0.11458141634023013 21 0.12148259151177362 22 0.14251474441552525 23 0.1309032433332457 24 0.1284933091463575 25 0.12465932293994443 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 912888.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.757846852976165 #Duplication Level Percentage of deduplicated Percentage of total 1 77.0173465748913 31.390612167220084 2 13.317631916429502 10.855960041882822 3 4.074941139003789 4.98257480635226 4 1.697225893262425 2.767010921299823 5 0.8762731202590199 1.7857502818448348 6 0.5451677515854788 1.3331918236981377 7 0.3679425533665531 1.0497582368564888 8 0.2670325486721245 0.8706937378830681 9 0.1880944390091352 0.6899691905127718 >10 1.2637908098420514 10.380743832331264 >50 0.1863522539019271 5.416161687373345 >100 0.17477234898798905 13.832569402322717 >500 0.015888395362468027 4.634783880837946 >1k 0.006463076079648012 5.719859151303855 >5k 5.38589673304001E-4 1.4133637727887427 >10k+ 5.38589673304001E-4 2.8769970654918477 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 14145 1.5494781397060757 No Hit TCCATGTACTCTGCGTTGATACCAC 12067 1.3218489015081805 No Hit GAGTACATGGAAGCAGTGGTATCAA 6817 0.7467509705462225 No Hit CATGTACTCTGCGTTGATACCACTG 6060 0.6638273260246602 No Hit GCTTCCATGTACTCTGCGTTGATAC 3767 0.41264645827308494 No Hit GTATCAACGCAGAGTACTTTTTTTT 3664 0.40136358457992655 No Hit CCCATGTACTCTGCGTTGATACCAC 3473 0.38044097413921535 No Hit GCGTTGATACCACTGCTTCCATGTA 3344 0.3663099964070072 No Hit GTACATGGGAAGCAGTGGTATCAAC 3215 0.3521790186747991 No Hit CATGGAAGCAGTGGTATCAACGCAG 3172 0.34746869276406306 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2686 0.29423105572644176 No Hit GTATCAACGCAGAGTACATGGAAGC 2605 0.2853581162201716 No Hit TATCAACGCAGAGTACTTTTTTTTT 2566 0.28108596016159704 No Hit ACTCTGCGTTGATACCACTGCTTCC 2299 0.25183812252981747 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 2269 0.2485518486386063 No Hit ACGCAGAGTACATGGAAGCAGTGGT 2256 0.2471277966190814 No Hit CAGTGGTATCAACGCAGAGTACATG 2189 0.23978845159537643 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1682 0.18425042283390733 No Hit TATCAACGCAGAGTACATGGAAGCA 1675 0.18348362559262474 No Hit GTATCAACGCAGAGTACATGGGAAG 1536 0.16825722323001288 No Hit GGTATCAACGCAGAGTACTTTTTTT 1330 0.14569147584369604 No Hit GTACATGGGGTGGTATCAACGCAAA 1297 0.14207657456336373 No Hit GGTATCAACGCAGAGTACATGGAAG 1257 0.13769487604174882 No Hit ATACCACTGCTTCCATGTACTCTGC 1217 0.1333131775201339 No Hit GAGTACATGGGAAGCAGTGGTATCA 1197 0.13112232825932643 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1162 0.1272883420529134 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1154 0.1264120023485904 No Hit AAGCAGTGGTATCAACGCAGAGTAC 1101 0.12060625180745065 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 999 0.10943292057733259 No Hit GCGTTGATACCACTGCTTCCCATGT 994 0.10888520826213073 No Hit GAATAACGCCGCCGCATCGCCAGTC 946 0.10362717003619282 No Hit GAATAGGACCGCGGTTCTATTTTGT 934 0.10231266047970836 No Hit GTGGTATCAACGCAGAGTACATGGA 932 0.10209357555362761 No Hit GAACTACGACGGTATCTGATCGTCT 927 0.10154586323842575 No Hit GGGTAGGCACACGCTGAGCCAGTCA 924 0.10121723584930462 No Hit GTACTCTGCGTTGATACCACTGCTT 914 0.10012181121890089 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.1908492608074595E-4 2 0.0 0.0 0.0 0.0 2.1908492608074595E-4 3 0.0 0.0 0.0 0.0 2.1908492608074595E-4 4 0.0 0.0 0.0 0.0 2.1908492608074595E-4 5 0.0 0.0 0.0 0.0 2.1908492608074595E-4 6 0.0 0.0 0.0 0.0 3.286273891211189E-4 7 0.0 0.0 0.0 0.0 3.286273891211189E-4 8 0.0 0.0 0.0 0.0 3.286273891211189E-4 9 0.0 0.0 0.0 0.0 3.286273891211189E-4 10 0.0 0.0 0.0 1.0954246304037297E-4 3.286273891211189E-4 11 0.0 0.0 0.0 1.0954246304037297E-4 3.286273891211189E-4 12 0.0 0.0 0.0 1.0954246304037297E-4 7.667972412826108E-4 13 0.0 0.0 0.0 1.0954246304037297E-4 9.858821673633567E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTATAC 25 0.0060409764 18.994131 3 CGAAATT 45 3.5340185E-5 16.890158 13 CGCGCGC 45 3.5340185E-5 16.890158 14 CGCGCTA 40 2.756811E-4 16.627161 16 CGGTCCA 205 0.0 15.294671 10 GGGCGTA 50 8.697992E-5 15.201976 16 GCGAAAT 50 8.702064E-5 15.20114 12 ATCGACG 45 6.751875E-4 14.779698 16 AGGATTA 45 6.7546853E-4 14.778888 5 TATCCTC 45 6.7546853E-4 14.778888 5 GGTCCAA 220 0.0 14.6821165 11 CTTACAC 65 3.3792458E-6 14.610869 3 AGAATTT 225 0.0 14.357421 17 TTTCGTT 80 1.2843702E-7 14.251852 17 TAGAGTG 180 0.0 14.25107 5 TAACGAA 60 2.5641466E-5 14.25107 13 CGACTAA 40 0.005274259 14.25107 13 ACCGACC 55 1.9565935E-4 13.819978 8 GCGTTAC 55 1.9575044E-4 13.819221 13 GGCCTAT 110 1.8735591E-10 13.807098 1 >>END_MODULE