##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062406_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2018424 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.333884258213338 32.0 32.0 32.0 32.0 32.0 2 31.429083780216644 32.0 32.0 32.0 32.0 32.0 3 31.509375631680957 32.0 32.0 32.0 32.0 32.0 4 31.60388302953195 32.0 32.0 32.0 32.0 32.0 5 31.533272493787234 32.0 32.0 32.0 32.0 32.0 6 35.136933567971845 36.0 36.0 36.0 36.0 36.0 7 35.14765034502166 36.0 36.0 36.0 36.0 36.0 8 35.088697419372735 36.0 36.0 36.0 36.0 36.0 9 35.22594212117969 36.0 36.0 36.0 36.0 36.0 10 35.099282905871114 36.0 36.0 36.0 36.0 36.0 11 35.232641407355445 36.0 36.0 36.0 36.0 36.0 12 35.14416247527774 36.0 36.0 36.0 36.0 36.0 13 35.19210235312303 36.0 36.0 36.0 36.0 36.0 14 35.157974241289246 36.0 36.0 36.0 36.0 36.0 15 35.11248677185765 36.0 36.0 36.0 36.0 36.0 16 35.1254969223513 36.0 36.0 36.0 36.0 36.0 17 35.09206787077443 36.0 36.0 36.0 36.0 36.0 18 35.11091772590893 36.0 36.0 36.0 36.0 36.0 19 35.10476044676441 36.0 36.0 36.0 36.0 36.0 20 35.10402274249613 36.0 36.0 36.0 36.0 36.0 21 35.10453105987642 36.0 36.0 36.0 36.0 36.0 22 35.08701095508179 36.0 36.0 36.0 36.0 36.0 23 35.04817124647745 36.0 36.0 36.0 36.0 36.0 24 35.02682786173767 36.0 36.0 36.0 36.0 36.0 25 34.9988030265197 36.0 36.0 36.0 36.0 36.0 26 34.958873854056435 36.0 36.0 36.0 32.0 36.0 27 34.94205776387915 36.0 36.0 36.0 32.0 36.0 28 34.93774895661169 36.0 36.0 36.0 32.0 36.0 29 34.91268237000749 36.0 36.0 36.0 32.0 36.0 30 34.90112979235285 36.0 36.0 36.0 32.0 36.0 31 34.907288557805494 36.0 36.0 36.0 32.0 36.0 32 34.8794539700281 36.0 36.0 36.0 32.0 36.0 33 34.868326476498495 36.0 36.0 36.0 32.0 36.0 34 34.85351046162749 36.0 36.0 36.0 32.0 36.0 35 34.838971890940655 36.0 36.0 36.0 32.0 36.0 36 34.811275529819305 36.0 36.0 36.0 32.0 36.0 37 34.817040919053674 36.0 36.0 36.0 32.0 36.0 38 34.78646112016108 36.0 36.0 36.0 32.0 36.0 39 34.79325404374899 36.0 36.0 36.0 32.0 36.0 40 34.782410930508156 36.0 36.0 36.0 32.0 36.0 41 34.75348985148809 36.0 36.0 36.0 32.0 36.0 42 34.73958197088422 36.0 36.0 36.0 32.0 36.0 43 34.733521797204155 36.0 36.0 36.0 32.0 36.0 44 34.70560199442733 36.0 36.0 36.0 32.0 36.0 45 34.682157465428475 36.0 36.0 36.0 32.0 36.0 46 34.6928445163157 36.0 36.0 36.0 32.0 36.0 47 34.66912204769662 36.0 36.0 36.0 32.0 36.0 48 34.63889599013884 36.0 36.0 36.0 32.0 36.0 49 34.63330895788001 36.0 36.0 36.0 32.0 36.0 50 34.11383980769155 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 1.0 19 2.0 20 5.0 21 28.0 22 122.0 23 383.0 24 1081.0 25 2398.0 26 5150.0 27 9733.0 28 16836.0 29 26962.0 30 40860.0 31 59305.0 32 90179.0 33 153450.0 34 349575.0 35 1262352.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.00752580491873 17.9741274441647 11.511785951599581 26.506560799316993 2 16.887393922097896 19.515807143338446 36.067527180914105 27.529271753649553 3 18.726373729817034 22.54323948058125 28.57273794719606 30.157648842405653 4 12.749886297090097 14.917425429222291 35.35952414217471 36.973164131512895 5 14.69106590092072 36.083597896180386 33.478397006773605 15.746939196125293 6 35.94727947693663 34.59067179874129 15.792772256674414 13.669276467647668 7 31.427291788048496 30.08089479712885 19.822247456431356 18.6695659583913 8 28.624065112186535 32.901560821710405 18.63478634816074 19.839587717942315 9 26.774850081053337 14.423381806795796 18.600948066412208 40.20082004573865 10 16.07229204567524 26.26905942458076 31.16535475202435 26.493293777719646 11 38.19692988192768 20.951296655212186 21.57693329052766 19.27484017233247 12 24.656860996500242 23.453793652869763 28.03419895918796 23.855146391442037 13 29.07402012659382 18.74829074565106 25.45768381668074 26.720005311074384 14 23.144988367161705 19.49654780165119 24.535726883945095 32.82273694724201 15 25.20530869628978 27.100797453855087 21.644758484837677 26.049135365017463 16 26.387369551689833 25.92393867690832 22.876610662576347 24.8120811088255 17 24.489750419138893 26.126324300543395 24.602214400938553 24.78171087937916 18 25.329316337895307 24.86682679159582 25.518473819177736 24.285383051331138 19 25.618205094667918 25.098591772590893 24.886644233322635 24.396558899418554 20 25.415423122198312 24.69560409507616 24.562480430276295 25.326492352449236 21 26.508355033432025 24.2643270194964 24.39854064359124 24.82877730348034 22 25.669730443157633 24.387393332619904 24.757830862098352 25.185045362124114 23 24.507041137045537 24.053271265105845 25.460210540500906 25.97947705734771 24 24.805590896659968 25.007877433086406 24.864300067775652 25.322231602477974 25 25.049097711878176 24.532308375247222 25.01565577896418 25.402938133910418 26 24.834920710415652 25.25618997792337 25.309251178146912 24.59963813351407 27 25.450648624867718 24.80469911178226 24.52477774739103 25.219874515958985 28 24.661716269723307 24.481823442448167 25.583276853624408 25.27318343420411 29 24.74029242617012 24.88897278272553 25.315493672290856 25.05524111881349 30 24.700013475860374 24.886792864135582 25.58094830422151 24.832245355782533 31 25.174096225570047 24.658347304629753 24.66434208075211 25.50321438904809 32 24.911614209898417 24.692235129982603 24.725577975687962 25.67057268443102 33 24.577690316801622 24.431090791627526 25.175483446490926 25.815735445079923 34 25.314651431017467 24.4595288205055 25.311480640341177 24.914339108135852 35 25.84565978208741 24.435648803224694 25.103942481857132 24.614748932830764 36 24.685299025378214 24.979538491417067 24.82293115817093 25.51223132503379 37 25.834462927511765 24.560994122146784 24.689510231745164 24.91503271859629 38 24.798307986825368 24.31491103950409 25.376333218392173 25.510447755278378 39 25.25118607388735 24.48112983198773 24.638926211737473 25.628757882387447 40 25.387430985759185 24.402058239497748 25.43994720633524 24.770563568407827 41 24.465721771045132 24.758177667328567 25.758760300115334 25.017340261510963 42 25.577777513545218 24.8711370851714 25.071590508238113 24.479494893045267 43 24.8754969223513 23.972317015651814 25.419436154147988 25.732749907848895 44 24.523638244491742 24.49782602664257 25.241277353023943 25.737258375841748 45 24.444963000836296 24.792610472328906 25.40576211935649 25.35666440747831 46 24.58738786407791 24.32193283759929 25.503351382095214 25.587327916227586 47 24.519625212542064 24.408746626080546 25.76128702393551 25.31034113744188 48 25.364888645794935 24.933116134172007 24.850576489379833 24.851418730653222 49 24.176040316603448 24.94540294804263 25.27323297780843 25.605323757545488 50 24.154389761516907 24.869601233437574 25.419832502982526 25.556176502062993 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 13.0 1 16.5 2 20.0 3 92.0 4 164.0 5 172.0 6 180.0 7 200.5 8 221.0 9 272.5 10 324.0 11 487.5 12 651.0 13 1088.0 14 1525.0 15 2063.5 16 2602.0 17 2948.0 18 3294.0 19 3725.0 20 4156.0 21 5348.0 22 6540.0 23 7163.0 24 7786.0 25 10744.5 26 13703.0 27 17765.0 28 21827.0 29 24382.5 30 26938.0 31 28481.0 32 30024.0 33 34564.0 34 39104.0 35 45208.0 36 51312.0 37 62246.5 38 73181.0 39 80305.0 40 87429.0 41 96012.0 42 104595.0 43 106602.5 44 108610.0 45 118031.0 46 127452.0 47 136429.0 48 145406.0 49 149946.0 50 154486.0 51 150157.5 52 145829.0 53 144122.0 54 142415.0 55 144127.5 56 145840.0 57 141930.5 58 138021.0 59 127168.0 60 116315.0 61 102899.5 62 89484.0 63 78766.5 64 68049.0 65 57701.5 66 47354.0 67 41208.0 68 35062.0 69 32336.0 70 29610.0 71 22989.0 72 16368.0 73 14535.5 74 12703.0 75 9515.0 76 6327.0 77 5715.0 78 5103.0 79 4288.0 80 3473.0 81 2762.0 82 2051.0 83 1737.0 84 1423.0 85 1164.5 86 906.0 87 639.0 88 372.0 89 235.0 90 98.0 91 67.0 92 36.0 93 31.0 94 26.0 95 16.0 96 6.0 97 5.0 98 4.0 99 5.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014912624899426484 2 0.004756186014435024 3 6.936104604384412E-4 4 2.97261625902189E-4 5 0.0 6 3.468052302192206E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.486308129510945E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2018424.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.14537236322741 #Duplication Level Percentage of deduplicated Percentage of total 1 82.7043945575729 46.43469028510208 2 10.269756812841674 11.531986406735745 3 2.7690573560776004 4.664092690563326 4 1.2611162885087854 2.832233744466283 5 0.7113919531611813 1.9970683053219078 6 0.4667386968955846 1.5723130760118078 7 0.31289877796661447 1.229747288065407 8 0.23185055341908714 1.0413868523467995 9 0.17598807874448832 0.8892824591338454 >10 0.9325642584664093 9.430964056309922 >50 0.07741074671866607 3.076529748425284 >100 0.07307193778731591 8.794456691729453 >500 0.01083043731905909 4.084944702363105 >1k 0.002929544520729097 2.42030369342521 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2695 0.13352001363439991 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2537 0.12569212415230893 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2031 0.100623060367891 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 4.9543604317031505E-5 0.0 5 0.0 0.0 0.0 4.9543604317031505E-5 0.0 6 0.0 0.0 0.0 4.9543604317031505E-5 0.0 7 0.0 0.0 0.0 4.9543604317031505E-5 0.0 8 0.0 0.0 0.0 9.908720863406301E-5 0.0 9 0.0 0.0 0.0 9.908720863406301E-5 0.0 10 0.0 0.0 0.0 9.908720863406301E-5 0.0 11 0.0 0.0 0.0 9.908720863406301E-5 0.0 12 0.0 0.0 0.0 9.908720863406301E-5 0.0 13 0.0 0.0 0.0 9.908720863406301E-5 0.0 14 0.0 0.0 0.0 9.908720863406301E-5 4.9543604317031505E-5 15 0.0 0.0 0.0 9.908720863406301E-5 4.9543604317031505E-5 16 4.9543604317031505E-5 0.0 0.0 1.486308129510945E-4 4.9543604317031505E-5 17 4.9543604317031505E-5 0.0 0.0 1.486308129510945E-4 4.9543604317031505E-5 18 4.9543604317031505E-5 0.0 0.0 1.486308129510945E-4 1.486308129510945E-4 19 4.9543604317031505E-5 0.0 0.0 1.486308129510945E-4 1.486308129510945E-4 20 4.9543604317031505E-5 0.0 0.0 2.477180215851575E-4 1.9817441726812602E-4 21 4.9543604317031505E-5 4.9543604317031505E-5 0.0 3.9634883453625204E-4 1.9817441726812602E-4 22 4.9543604317031505E-5 4.9543604317031505E-5 0.0 4.95436043170315E-4 1.9817441726812602E-4 23 4.9543604317031505E-5 4.9543604317031505E-5 0.0 8.422412733895356E-4 2.97261625902189E-4 24 4.9543604317031505E-5 4.9543604317031505E-5 0.0 0.001189046503608756 2.97261625902189E-4 25 4.9543604317031505E-5 4.9543604317031505E-5 0.0 0.0014863081295109451 2.97261625902189E-4 26 4.9543604317031505E-5 4.9543604317031505E-5 0.0 0.0017835697554131342 4.4589243885328355E-4 27 4.9543604317031505E-5 4.9543604317031505E-5 0.0 0.0035175959065092367 4.4589243885328355E-4 28 4.9543604317031505E-5 4.9543604317031505E-5 0.0 0.01020598248930849 4.4589243885328355E-4 29 4.9543604317031505E-5 9.908720863406301E-5 0.0 0.02209644752539605 4.4589243885328355E-4 30 4.9543604317031505E-5 9.908720863406301E-5 0.0 0.04671961887096071 4.4589243885328355E-4 31 4.9543604317031505E-5 9.908720863406301E-5 0.0 0.10478472313052163 4.95436043170315E-4 32 4.9543604317031505E-5 9.908720863406301E-5 0.0 0.16403887389369132 4.95436043170315E-4 33 4.9543604317031505E-5 9.908720863406301E-5 0.0 0.22809875427561305 4.95436043170315E-4 34 4.9543604317031505E-5 9.908720863406301E-5 0.0 0.30350412004613503 5.94523251804378E-4 35 4.9543604317031505E-5 9.908720863406301E-5 0.0 0.3864896572771628 5.94523251804378E-4 36 4.9543604317031505E-5 9.908720863406301E-5 0.0 0.512726761076959 5.94523251804378E-4 37 4.9543604317031505E-5 9.908720863406301E-5 0.0 0.690390126157834 5.94523251804378E-4 38 4.9543604317031505E-5 9.908720863406301E-5 0.0 0.929239842570243 5.94523251804378E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2180 0.0 24.121004 1 CGCAATA 710 0.0 21.690092 36 ATACGAA 750 0.0 20.239954 40 TCTAGCG 765 0.0 20.130672 28 CAATACG 775 0.0 19.870924 38 GCCGGTC 815 0.0 19.705477 8 AATACGA 780 0.0 19.461494 39 CGGTCCA 805 0.0 19.403683 10 CGCCGGT 790 0.0 19.215147 7 CGAATGC 770 0.0 19.142813 43 GTATAGG 230 0.0 19.131813 1 TAGCGGC 805 0.0 19.13039 30 GCAATAC 820 0.0 18.780445 37 CTAGCGG 820 0.0 18.780445 29 TACGAAT 840 0.0 18.333292 41 CCGGTCC 965 0.0 18.010323 9 GGTATCA 1065 0.0 17.559952 1 AACGCAG 2915 0.0 17.509396 6 TCAACGC 2925 0.0 17.449533 4 CAACGCA 2950 0.0 17.301655 5 >>END_MODULE