##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062405_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1772406 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.178413975127594 32.0 32.0 32.0 32.0 32.0 2 30.823836073676123 32.0 32.0 32.0 32.0 32.0 3 30.809610777666066 32.0 32.0 32.0 32.0 32.0 4 30.889954107580316 32.0 32.0 32.0 32.0 32.0 5 30.66153748069009 32.0 32.0 32.0 32.0 32.0 6 34.32075720799862 36.0 36.0 36.0 32.0 36.0 7 34.19770244515083 36.0 36.0 36.0 32.0 36.0 8 34.18872820335747 36.0 36.0 36.0 32.0 36.0 9 34.370095226488736 36.0 36.0 36.0 32.0 36.0 10 34.018650354377044 36.0 36.0 36.0 32.0 36.0 11 34.35827682822107 36.0 36.0 36.0 32.0 36.0 12 34.114946011241216 36.0 36.0 36.0 32.0 36.0 13 34.24493767229404 36.0 36.0 36.0 32.0 36.0 14 34.1446102078192 36.0 36.0 36.0 32.0 36.0 15 34.081508412858 36.0 36.0 36.0 32.0 36.0 16 34.07048836440409 36.0 36.0 36.0 32.0 36.0 17 33.98717223931763 36.0 36.0 36.0 32.0 36.0 18 34.00436073901803 36.0 36.0 36.0 32.0 36.0 19 33.99952155431656 36.0 36.0 36.0 32.0 36.0 20 33.99146527375782 36.0 36.0 36.0 32.0 36.0 21 33.952581406291785 36.0 36.0 36.0 32.0 36.0 22 33.90074678149363 36.0 36.0 36.0 32.0 36.0 23 33.829422265553156 36.0 36.0 36.0 32.0 36.0 24 33.804628849146305 36.0 36.0 36.0 32.0 36.0 25 33.29813259490207 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 5.0 4 64.0 5 149.0 6 305.0 7 70.0 8 271.0 9 283.0 10 207.0 11 71.0 12 121.0 13 106.0 14 252.0 15 364.0 16 562.0 17 769.0 18 984.0 19 1458.0 20 2227.0 21 3167.0 22 4860.0 23 7324.0 24 10130.0 25 14616.0 26 20610.0 27 27059.0 28 37288.0 29 50294.0 30 65886.0 31 91667.0 32 133444.0 33 190227.0 34 410750.0 35 696816.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.37151993120691 16.961345076458397 11.158451500927342 25.508683491407353 2 16.470788035812216 19.791170622606295 36.552870867929464 27.185170473652022 3 19.859348913209683 23.30532310874561 27.967662888775163 28.867665089269543 4 12.756211022406402 14.795572890216075 35.017199233482984 37.43101685389455 5 14.43651280106287 36.39218966410544 33.702053159318794 15.469244375512895 6 35.3853074969618 34.02868914225527 16.567406727549105 14.018596633233821 7 30.44339836750271 30.453617001096383 20.355010009744397 18.747974621656503 8 28.76954290757695 32.51885611416949 19.611770439056507 19.099830539197058 9 26.757070863367044 14.782232542800156 18.515485761141367 39.94521083269144 10 15.931947774661731 26.76223801898436 31.580852968671007 25.7249612376829 11 37.76013674000927 21.223283081982437 20.999770104164842 20.01681007384345 12 23.960450630514387 24.032309272363463 28.5339820195216 23.473258077600555 13 29.877148794618925 19.175102366590167 25.181192677392588 25.76655616139832 14 23.61413238420012 19.49453120542818 24.567069061642634 32.324267348729066 15 25.64696925025106 26.47888771783567 23.100210902543143 24.773932129370127 16 26.476973892297824 25.619651264718907 23.76905663446506 24.134318208518213 17 24.102560336753818 25.906082197847386 25.81429057218098 24.177066893217813 18 25.481130988292875 24.1251855718324 26.976890799026553 23.416792640848175 19 25.004109786375846 26.47374679761491 25.008742122909446 23.513401293099793 20 24.805758419112188 24.092225987334686 26.48593750264779 24.61607809090534 21 25.855113792034025 25.095144455183956 23.93341328649878 25.116328466283242 22 24.66857604232644 25.323259483926158 24.90480901629109 25.10335545745631 23 23.57273402653605 24.711179659274197 25.27845337265437 26.437632941535384 24 23.819969550517047 26.32987693098588 24.983377067980307 24.866776450516763 25 25.124011761416114 24.66044701289971 24.600001694728547 25.615539530955626 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 165.0 1 165.0 2 481.5 3 798.0 4 798.0 5 798.0 6 2481.0 7 4164.0 8 4164.0 9 4164.0 10 4438.0 11 4712.0 12 4712.0 13 4712.0 14 4854.5 15 4997.0 16 4997.0 17 4997.0 18 8111.5 19 11226.0 20 11226.0 21 11226.0 22 17946.5 23 24667.0 24 24667.0 25 24667.0 26 36843.5 27 49020.0 28 49020.0 29 49020.0 30 60361.5 31 71703.0 32 71703.0 33 71703.0 34 87733.5 35 103764.0 36 103764.0 37 103764.0 38 117871.5 39 131979.0 40 131979.0 41 131979.0 42 154663.5 43 177348.0 44 177348.0 45 177348.0 46 227102.0 47 276856.0 48 276856.0 49 276856.0 50 258393.5 51 239931.0 52 239931.0 53 239931.0 54 218526.0 55 197121.0 56 197121.0 57 197121.0 58 182045.0 59 166969.0 60 166969.0 61 166969.0 62 148155.5 63 129342.0 64 129342.0 65 129342.0 66 106961.5 67 84581.0 68 84581.0 69 84581.0 70 63643.0 71 42705.0 72 42705.0 73 42705.0 74 33427.0 75 24149.0 76 24149.0 77 24149.0 78 19800.0 79 15451.0 80 15451.0 81 15451.0 82 10693.0 83 5935.0 84 5935.0 85 5935.0 86 4366.5 87 2798.0 88 2798.0 89 2798.0 90 1940.5 91 1083.0 92 1083.0 93 1083.0 94 628.5 95 174.0 96 174.0 97 174.0 98 471.0 99 768.0 100 768.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007616765007565986 2 0.0028210240768762915 3 0.0043443770783894884 4 0.013202392679781044 5 0.033852288922515496 6 0.04485428282233303 7 0.06386798510047922 8 0.08434861989860111 9 0.09128833912771679 10 0.11289738355658918 11 0.11504136185501515 12 0.12773597020095845 13 0.11583124859654052 14 0.11786238593189145 15 0.10832732455204959 16 0.10686039203207391 17 0.11803164737650403 18 0.12423790034563187 19 0.12643829912559537 20 0.11616977148576567 21 0.1242943208271694 22 0.1434772845499282 23 0.13320875691009848 24 0.1275667087563459 25 0.12474568467946962 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1772406.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.84091062533175 #Duplication Level Percentage of deduplicated Percentage of total 1 77.81985915952482 37.22972926926732 2 13.136075043927162 12.568835842883406 3 3.9724858102689553 5.70142015828427 4 1.6702373623928186 3.1962270550929874 5 0.8819105806618874 2.109570263448989 6 0.5191193363621515 1.4901085064869928 7 0.35078911118684986 1.1747449361640754 8 0.25097708087665943 0.9605577676181537 9 0.18024408759061086 0.7760737156650193 >10 0.9938762046930344 8.787636191005427 >50 0.101072677446964 3.4019316967438353 >100 0.10161338921760249 10.361893350117402 >500 0.015241739699547861 5.00974034271391 >1k 0.006025804067263108 5.070505234942297 >5k 2.363060418534552E-4 0.7035726637830036 >10k+ 2.363060418534552E-4 1.457453005782997 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 13838 0.7807466235162824 No Hit TCCATGTACTCTGCGTTGATACCAC 11946 0.6739990724472835 No Hit GAGTACATGGAAGCAGTGGTATCAA 6705 0.37829932870911065 No Hit CATGTACTCTGCGTTGATACCACTG 5742 0.3239664049884733 No Hit GCTTCCATGTACTCTGCGTTGATAC 3891 0.219532093662513 No Hit GTATCAACGCAGAGTACTTTTTTTT 3758 0.21202816961802207 No Hit GCGTTGATACCACTGCTTCCATGTA 3406 0.19216816011681295 No Hit CATGGAAGCAGTGGTATCAACGCAG 3130 0.17659610721245583 No Hit CCCATGTACTCTGCGTTGATACCAC 3072 0.17332371928327933 No Hit GTACATGGGAAGCAGTGGTATCAAC 2925 0.16502990849726307 No Hit TATCAACGCAGAGTACTTTTTTTTT 2528 0.14263097732686528 No Hit GTATCAACGCAGAGTACATGGAAGC 2519 0.14212319299302756 No Hit ACTCTGCGTTGATACCACTGCTTCC 2428 0.1369889291731127 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 2401 0.13546557617159952 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2311 0.1303877328332222 No Hit ACGCAGAGTACATGGAAGCAGTGGT 2290 0.12920290272093415 No Hit GCGCAAGACGGACCAGAGCGAAAGC 2233 0.12598693527329516 No Hit CAGTGGTATCAACGCAGAGTACATG 2145 0.1210219328979929 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 2033 0.11470283896579002 No Hit GAATAACGCCGCCGCATCGCCAGTC 1970 0.11114834862892588 No Hit GAATAGGACCGCGGTTCTATTTTGT 1878 0.10595766432747349 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 1859 0.1048856751782605 No Hit GAACTACGACGGTATCTGATCGTCT 1835 0.1035315836213599 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1284096307505166E-4 2 0.0 0.0 0.0 0.0 1.1284096307505166E-4 3 0.0 0.0 0.0 0.0 1.1284096307505166E-4 4 0.0 0.0 0.0 0.0 1.1284096307505166E-4 5 0.0 0.0 0.0 0.0 1.1284096307505166E-4 6 0.0 0.0 0.0 0.0 1.1284096307505166E-4 7 0.0 0.0 0.0 0.0 1.1284096307505166E-4 8 0.0 0.0 0.0 0.0 1.1284096307505166E-4 9 0.0 0.0 0.0 0.0 1.1284096307505166E-4 10 0.0 0.0 0.0 0.0 2.2568192615010331E-4 11 0.0 0.0 0.0 0.0 2.2568192615010331E-4 12 0.0 5.642048153752583E-5 0.0 0.0 4.5136385230020663E-4 13 0.0 5.642048153752583E-5 0.0 0.0 7.334662599878357E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAATTTC 410 0.0 13.675043 18 CGAACGA 155 0.0 13.487361 16 CGGTCCA 455 0.0 13.155763 10 AGAATTT 435 0.0 13.107579 17 CGGACAT 210 0.0 12.665649 5 CGCAATA 150 1.8189894E-12 12.659212 2 GTATTAC 100 1.4566285E-7 12.340989 1 ACGAACG 170 0.0 12.295909 15 TTAGTAC 70 1.0956332E-4 12.20882 3 CGAGCCG 385 0.0 12.092671 15 GGTTCTA 355 0.0 12.042988 13 CGGTTCT 355 0.0 12.042647 12 AATCGCT 95 1.0382028E-6 12.001749 15 ACGGTAT 325 0.0 11.986024 9 AAGACGG 390 0.0 11.934939 5 AACGGAC 120 9.993528E-9 11.876731 15 CTAAACG 80 2.8659286E-5 11.875388 12 TTACTCT 120 1.00444595E-8 11.872705 4 GTTCAAA 465 0.0 11.8408165 1 CCTATAC 65 8.05457E-4 11.687077 3 >>END_MODULE