##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062405_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1772406 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.277181413287927 32.0 32.0 32.0 32.0 32.0 2 31.412135819896797 32.0 32.0 32.0 32.0 32.0 3 31.502816510438354 32.0 32.0 32.0 32.0 32.0 4 31.608709855416873 32.0 32.0 32.0 32.0 32.0 5 31.53739944459678 32.0 32.0 32.0 32.0 32.0 6 35.14741769098051 36.0 36.0 36.0 36.0 36.0 7 35.158545502554155 36.0 36.0 36.0 36.0 36.0 8 35.10638533157753 36.0 36.0 36.0 36.0 36.0 9 35.24062263386605 36.0 36.0 36.0 36.0 36.0 10 35.11276705224424 36.0 36.0 36.0 36.0 36.0 11 35.24123197506666 36.0 36.0 36.0 36.0 36.0 12 35.149716261398346 36.0 36.0 36.0 36.0 36.0 13 35.18761051361821 36.0 36.0 36.0 36.0 36.0 14 35.149330909509445 36.0 36.0 36.0 36.0 36.0 15 35.11362746458769 36.0 36.0 36.0 36.0 36.0 16 35.11306551659157 36.0 36.0 36.0 36.0 36.0 17 35.08687117962815 36.0 36.0 36.0 36.0 36.0 18 35.099519523179225 36.0 36.0 36.0 36.0 36.0 19 35.08283034474043 36.0 36.0 36.0 36.0 36.0 20 35.073986998464235 36.0 36.0 36.0 36.0 36.0 21 35.04868636192836 36.0 36.0 36.0 36.0 36.0 22 35.02908475823259 36.0 36.0 36.0 36.0 36.0 23 34.972761884128126 36.0 36.0 36.0 36.0 36.0 24 34.93987438543991 36.0 36.0 36.0 32.0 36.0 25 34.91163254920148 36.0 36.0 36.0 32.0 36.0 26 34.860065357485816 36.0 36.0 36.0 32.0 36.0 27 34.82979520493612 36.0 36.0 36.0 32.0 36.0 28 34.80306995124142 36.0 36.0 36.0 32.0 36.0 29 34.76411725078791 36.0 36.0 36.0 32.0 36.0 30 34.75109145421534 36.0 36.0 36.0 32.0 36.0 31 34.73753981875485 36.0 36.0 36.0 32.0 36.0 32 34.69209481349081 36.0 36.0 36.0 32.0 36.0 33 34.674100629314054 36.0 36.0 36.0 32.0 36.0 34 34.65025282017777 36.0 36.0 36.0 32.0 36.0 35 34.59113543962275 36.0 36.0 36.0 32.0 36.0 36 34.55525539859378 36.0 36.0 36.0 32.0 36.0 37 34.51834850480082 36.0 36.0 36.0 32.0 36.0 38 34.460121439444464 36.0 36.0 36.0 32.0 36.0 39 34.3764605852158 36.0 36.0 36.0 32.0 36.0 40 34.325014697535444 36.0 36.0 36.0 32.0 36.0 41 34.30495890896329 36.0 36.0 36.0 32.0 36.0 42 34.194130464464685 36.0 36.0 36.0 32.0 36.0 43 34.22147521504667 36.0 36.0 36.0 32.0 36.0 44 34.192701333667344 36.0 36.0 36.0 32.0 36.0 45 34.06858078792331 36.0 36.0 36.0 32.0 36.0 46 34.14909394348699 36.0 36.0 36.0 32.0 36.0 47 34.075737726006345 36.0 36.0 36.0 32.0 36.0 48 34.06174657499467 36.0 36.0 36.0 32.0 36.0 49 34.09680118437875 36.0 36.0 36.0 32.0 36.0 50 33.53219860460865 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 6.0 21 49.0 22 135.0 23 468.0 24 1312.0 25 3154.0 26 6747.0 27 12824.0 28 21902.0 29 32298.0 30 45568.0 31 64476.0 32 94937.0 33 141372.0 34 305163.0 35 1041995.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.931255625245115 17.47994661836362 11.651924644992368 25.9368731113989 2 15.800134624813733 20.263291379215982 36.270610545535185 27.665963450435104 3 19.302514787891646 23.50259197154586 28.32171817133417 28.873175069228324 4 12.521799475853431 15.302766579873111 35.18857146081172 36.986862483461735 5 14.231897206396276 36.542812425595486 33.58536362436146 15.63992674364677 6 35.603213497637945 34.2217525512032 16.24295658031854 13.932077370840313 7 30.444886781019697 30.533241255107463 20.28011640673751 18.741755557135328 8 28.765305466129092 32.72749020258338 19.41806786932565 19.089136461961875 9 26.857164780529967 14.58824896778729 18.355557361010966 40.19902889067178 10 15.92727625611739 26.782294801529673 31.593269262234497 25.697159680118435 11 37.9819860686547 21.13494312251256 20.907681422879406 19.97538938595333 12 23.956474983722693 23.97475521974085 28.507068922131833 23.56170087440462 13 30.063766428233713 19.049924227293292 25.169233234371806 25.717076110101182 14 23.684246160304127 19.365766082940365 24.5473666868652 32.40262106989031 15 25.73936220030851 26.58177641014531 22.957381096656185 24.721480292890003 16 26.548544746519703 25.578958771297323 23.705403840880702 24.167092641302276 17 24.208843797640046 25.99556760697041 25.673519498354214 24.12206909703533 18 25.663533073122075 24.012500521889454 26.83578141802725 23.488184986961226 19 25.11540809498501 26.437001454520015 24.927979255317346 23.519611195177628 20 24.893167818208696 24.013685352001744 26.53240848879997 24.560738340989595 21 26.044314903018833 24.987672124784048 23.904173197337407 25.06383977485971 22 24.67707737391997 25.24720633985667 24.97604950558732 25.09966678063604 23 23.67826558926115 24.496136889629124 25.323261148969255 26.502336372140466 24 23.980397267894602 26.166634506992192 24.863547065401495 24.989421159711714 25 25.37900458472833 24.35395727615456 24.606382510553452 25.66065562856366 26 23.8946945564391 25.181081535494688 25.584770080895687 25.339453827170523 27 25.608523103622982 25.260352312054913 25.023950494412677 24.10717408990942 28 24.504994905230518 24.043362525290483 25.776994661494037 25.674647907984966 29 23.834324641193945 25.433788872301268 26.275920979730376 24.455965506774408 30 25.137637764710796 24.77265366964454 25.9958497093781 24.093858856266568 31 24.256970468391554 24.989421159711714 24.98236859951952 25.771239772377207 32 24.171154915972977 25.208840412411153 25.243200485667504 25.376804185948366 33 23.853338343472092 24.640968265735953 25.669400803201974 25.836292587589977 34 24.237279720334957 25.367043442642373 26.31417406621282 24.08150277080985 35 25.814683543161106 24.710534719471724 25.475145085268274 23.9996366520989 36 24.3261983992381 25.663984436974374 25.200772283551288 24.809044880236243 37 25.68390086695712 25.115351674503472 25.292229884123614 23.908517574415793 38 24.437177486422414 24.96741717191208 25.07709858802103 25.51830675364448 39 24.591769605835232 24.845041147457188 25.357451960780995 25.20573728592659 40 25.45223836976404 25.144577483939912 24.950491027450823 24.452693118845232 41 23.70861980832834 25.30644784547107 26.087702253321194 24.897230092879397 42 26.004256361127194 25.419514490472274 25.16009311636273 23.41613603203781 43 24.87206655811366 23.86986954456259 25.216513597900253 26.041550299423495 44 24.444624989985364 24.720577565185405 26.0743305991968 24.760466845632433 45 24.823601364472925 24.98056314411032 25.439995125270393 24.755840366146355 46 24.23562812746311 24.67091287929438 26.129666898555236 24.96379209468727 47 24.87093814848291 24.216404142166073 26.51790842504483 24.39474928430619 48 24.950942391303123 26.53601939961837 24.384255074740214 24.128783134338295 49 23.76819983683197 25.042117889467765 26.46701715069798 24.72266512300229 50 23.68205912305596 26.500094504359893 24.528479664636468 25.289366707947675 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 11.0 1 15.0 2 19.0 3 92.5 4 166.0 5 201.5 6 237.0 7 230.0 8 223.0 9 278.0 10 333.0 11 565.5 12 798.0 13 1402.5 14 2007.0 15 2815.5 16 3624.0 17 4448.5 18 5273.0 19 5833.5 20 6394.0 21 7538.0 22 8682.0 23 9328.5 24 9975.0 25 11424.0 26 12873.0 27 15962.0 28 19051.0 29 21175.5 30 23300.0 31 24724.5 32 26149.0 33 30140.5 34 34132.0 35 39516.5 36 44901.0 37 54572.0 38 64243.0 39 68893.0 40 73543.0 41 81099.0 42 88655.0 43 92709.0 44 96763.0 45 112032.5 46 127302.0 47 140120.0 48 152938.0 49 149551.5 50 146165.0 51 134805.0 52 123445.0 53 119940.5 54 116436.0 55 118634.5 56 120833.0 57 117009.0 58 113185.0 59 104279.0 60 95373.0 61 84404.5 62 73436.0 63 63871.0 64 54306.0 65 46048.5 66 37791.0 67 32807.5 68 27824.0 69 25628.0 70 23432.0 71 18270.5 72 13109.0 73 11812.0 74 10515.0 75 7641.5 76 4768.0 77 4218.0 78 3668.0 79 3174.5 80 2681.0 81 2117.5 82 1554.0 83 1327.0 84 1100.0 85 897.0 86 694.0 87 518.0 88 342.0 89 214.0 90 86.0 91 66.0 92 46.0 93 28.0 94 10.0 95 8.0 96 6.0 97 4.5 98 3.0 99 4.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01472574568129424 2 0.0041186951522393855 3 5.642048153752583E-4 4 5.642048153752583E-5 5 0.0 6 3.949433707626808E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.6926144461257747E-4 47 0.0 48 0.0 49 0.0 50 5.642048153752583E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1772406.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.09357976548602 #Duplication Level Percentage of deduplicated Percentage of total 1 78.61087037806239 40.95121646473875 2 12.905456740505173 13.445828802430709 3 3.750519060255788 5.861338914822317 4 1.5312956796494823 3.190826945294577 5 0.8341258437114942 2.1726300586919023 6 0.5024341314808589 1.5704155503120492 7 0.3387489833364733 1.2352653028741107 8 0.2444444893323235 1.0187190802613513 9 0.17485549734818484 0.8197963918687255 >10 0.9101906225127638 8.697189730956545 >50 0.09236053068191535 3.3817686575265746 >100 0.08911905485335933 9.941501873084526 >500 0.011657005208844471 4.172126511807561 >1k 0.003704095113090767 2.8774245215218213 >5k 2.178879478288686E-4 0.6639511938084808 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 6218 0.3508225542003356 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 5481 0.3092406593071791 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 2711 0.15295592544823253 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 2513 0.1417846701038024 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2367 0.13354727979932363 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2259 0.12745386779327084 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2077 0.11718534015344115 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1924 0.1085530064781997 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1787 0.10082340050755864 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.6926144461257747E-4 2 0.0 0.0 0.0 0.0 1.6926144461257747E-4 3 0.0 0.0 0.0 0.0 1.6926144461257747E-4 4 0.0 0.0 0.0 0.0 1.6926144461257747E-4 5 0.0 0.0 0.0 0.0 1.6926144461257747E-4 6 0.0 0.0 0.0 0.0 1.6926144461257747E-4 7 0.0 0.0 0.0 0.0 2.2568192615010331E-4 8 0.0 0.0 0.0 0.0 2.2568192615010331E-4 9 0.0 0.0 0.0 0.0 2.2568192615010331E-4 10 0.0 0.0 0.0 0.0 2.2568192615010331E-4 11 0.0 0.0 0.0 0.0 2.2568192615010331E-4 12 0.0 0.0 0.0 0.0 5.077843338377325E-4 13 0.0 0.0 0.0 0.0 5.642048153752583E-4 14 0.0 0.0 0.0 0.0 5.642048153752583E-4 15 0.0 0.0 0.0 0.0 5.642048153752583E-4 16 0.0 0.0 0.0 0.0 6.20625296912784E-4 17 0.0 0.0 0.0 5.642048153752583E-5 6.20625296912784E-4 18 0.0 0.0 0.0 1.6926144461257747E-4 7.898867415253616E-4 19 0.0 0.0 0.0 2.8210240768762916E-4 7.898867415253616E-4 20 0.0 0.0 0.0 4.5136385230020663E-4 8.463072230628874E-4 21 0.0 0.0 0.0 6.770457784503099E-4 8.463072230628874E-4 22 0.0 0.0 0.0 0.0011284096307505166 9.027277046004133E-4 23 0.0 0.0 0.0 0.0020875578168884556 9.027277046004133E-4 24 0.0 0.0 0.0 0.004287956596851963 9.027277046004133E-4 25 0.0 0.0 0.0 0.005642048153752583 9.027277046004133E-4 26 0.0 0.0 0.0 0.007786026452178564 9.591481861379391E-4 27 0.0 0.0 0.0 0.010324948121367226 0.001015568667675465 28 0.0 0.0 0.0 0.016982564942795274 0.001015568667675465 29 0.0 0.0 0.0 0.02973359377027611 0.001015568667675465 30 0.0 0.0 0.0 0.05247104782989902 0.001015568667675465 31 0.0 0.0 0.0 0.09518135235380606 0.001015568667675465 32 0.0 0.0 0.0 0.1509812085944191 0.001015568667675465 33 0.0 0.0 0.0 0.20068765282897935 0.001015568667675465 34 0.0 5.642048153752583E-5 0.0 0.26495058130022126 0.0010719891492129907 35 0.0 5.642048153752583E-5 0.0 0.3318088519221894 0.0010719891492129907 36 0.0 5.642048153752583E-5 0.0 0.43460696928356146 0.0010719891492129907 37 0.0 5.642048153752583E-5 0.0 0.5918508513286459 0.0010719891492129907 38 0.0 5.642048153752583E-5 0.0 0.7756123596963675 0.0011284096307505166 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTAACG 50 0.002580572 22.000494 2 TCGTATA 65 4.9336045E-4 20.307575 44 ATACTAG 100 1.1216744E-6 19.804356 1 CGATTAA 130 3.5903213E-8 18.615276 41 TCGCATG 60 0.0074136765 18.33323 11 CGCAATA 595 0.0 18.117542 36 TAGCGGC 600 0.0 17.966562 30 AATACGA 620 0.0 17.386997 39 CAATACG 625 0.0 17.2479 38 CTAGCGG 635 0.0 16.97628 29 GCGAAAG 700 0.0 16.97133 18 ACGATTA 130 7.321978E-7 16.92298 40 CGCCGGT 670 0.0 16.746172 7 GAGCGAA 710 0.0 16.732298 16 AGCGAAA 710 0.0 16.732298 17 GATATAC 240 0.0 16.50363 1 GTATAGA 200 7.2759576E-11 16.50363 1 TATATCA 400 0.0 16.499905 4 CGAATGC 655 0.0 16.45792 43 CGAAAGC 715 0.0 16.307598 19 >>END_MODULE