##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062404_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1658232 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.251458179555094 32.0 32.0 32.0 32.0 32.0 2 31.02104470303311 32.0 32.0 32.0 32.0 32.0 3 31.01232517524689 32.0 32.0 32.0 32.0 32.0 4 31.033146749067683 32.0 32.0 32.0 32.0 32.0 5 30.921125029549543 32.0 32.0 32.0 32.0 32.0 6 34.498521919731374 36.0 36.0 36.0 32.0 36.0 7 34.4301376405714 36.0 36.0 36.0 32.0 36.0 8 34.44451198626007 36.0 36.0 36.0 32.0 36.0 9 34.5460592968897 36.0 36.0 36.0 32.0 36.0 10 34.312754186386464 36.0 36.0 36.0 32.0 36.0 11 34.524931372690915 36.0 36.0 36.0 32.0 36.0 12 34.36909250334091 36.0 36.0 36.0 32.0 36.0 13 34.46241418571105 36.0 36.0 36.0 32.0 36.0 14 34.391857713516565 36.0 36.0 36.0 32.0 36.0 15 34.33129320867044 36.0 36.0 36.0 32.0 36.0 16 34.32560944427559 36.0 36.0 36.0 32.0 36.0 17 34.269982728592865 36.0 36.0 36.0 32.0 36.0 18 34.28036547358874 36.0 36.0 36.0 32.0 36.0 19 34.26433092595005 36.0 36.0 36.0 32.0 36.0 20 34.25186704876037 36.0 36.0 36.0 32.0 36.0 21 34.21579127649207 36.0 36.0 36.0 32.0 36.0 22 34.173589702767764 36.0 36.0 36.0 32.0 36.0 23 34.15242016798614 36.0 36.0 36.0 32.0 36.0 24 34.11877529802826 36.0 36.0 36.0 32.0 36.0 25 33.63748196874744 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 20.0 4 38.0 5 158.0 6 281.0 7 75.0 8 225.0 9 312.0 10 206.0 11 51.0 12 115.0 13 94.0 14 233.0 15 337.0 16 643.0 17 854.0 18 1177.0 19 1521.0 20 2093.0 21 2749.0 22 3869.0 23 5296.0 24 7402.0 25 10330.0 26 14909.0 27 19535.0 28 27258.0 29 37949.0 30 51098.0 31 73628.0 32 110751.0 33 168488.0 34 401466.0 35 715070.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.124599760323605 17.62821691980249 11.087656786297796 26.159526533576106 2 17.112560367827626 20.031203110903117 36.6620270081198 26.194209513149453 3 18.91582853431322 23.80712009943606 28.50349576124249 28.773555605008227 4 12.68557063535815 15.319295485990903 36.04572754786808 35.949406330782864 5 14.783286449664553 36.255745335713414 33.47596505653489 15.485003158087146 6 33.92674528816991 35.52712948656301 16.890309790120767 13.655815435146309 7 30.027245654423723 30.51935708703825 20.96473151112305 18.48866574741498 8 28.149124151825756 32.2701554930788 19.796124322034 19.784596033061444 9 27.64442985008318 14.060466531293233 18.731936459799645 39.563167158823944 10 15.939425810685734 26.228247225866596 31.49184046446169 26.34048649898598 11 37.45417419361071 21.02184906826898 22.410509867944395 19.113466870175913 12 24.638638574566023 23.782675303391425 28.61471628818094 22.963969833861604 13 29.236742942258658 19.38183743692758 25.427853964815295 25.953565655998467 14 23.556778186819855 19.903717787936408 24.833818689231137 31.7056853360126 15 25.448509275671704 26.992301264930184 22.291255125647798 25.267934333750308 16 25.999789905566175 25.60278387199212 23.70112738605094 24.69629883639077 17 24.042567322787104 25.555246950851345 25.309684820673834 25.09250090568772 18 24.94209356809893 24.49743979904838 26.34682269400768 24.21364393884501 19 25.574295336014778 24.977099439457078 25.380523684644334 24.06808153988381 20 25.639076544280265 24.177528004409943 25.002460366959962 25.18093508434983 21 26.880577061724008 23.940139386539816 24.321634863300474 24.8576486884357 22 25.815534303082277 24.389055144027953 24.800529063780573 24.994881489109197 23 24.350442700187322 24.100680324691087 25.409396524341567 26.139480450780024 24 24.6934297225228 25.102773805843253 25.056519554799817 25.147276916834134 25 24.79155898421838 24.424371899349318 25.30149072763546 25.48257838879684 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 149.0 1 149.0 2 456.0 3 763.0 4 763.0 5 763.0 6 2191.5 7 3620.0 8 3620.0 9 3620.0 10 3760.5 11 3901.0 12 3901.0 13 3901.0 14 4454.0 15 5007.0 16 5007.0 17 5007.0 18 8163.0 19 11319.0 20 11319.0 21 11319.0 22 18473.5 23 25628.0 24 25628.0 25 25628.0 26 38514.5 27 51401.0 28 51401.0 29 51401.0 30 62163.5 31 72926.0 32 72926.0 33 72926.0 34 89673.0 35 106420.0 36 106420.0 37 106420.0 38 118886.5 39 131353.0 40 131353.0 41 131353.0 42 148999.5 43 166646.0 44 166646.0 45 166646.0 46 191248.5 47 215851.0 48 215851.0 49 215851.0 50 216050.0 51 216249.0 52 216249.0 53 216249.0 54 200091.5 55 183934.0 56 183934.0 57 183934.0 58 169459.0 59 154984.0 60 154984.0 61 154984.0 62 139558.0 63 124132.0 64 124132.0 65 124132.0 66 104035.5 67 83939.0 68 83939.0 69 83939.0 70 64330.0 71 44721.0 72 44721.0 73 44721.0 74 35512.0 75 26303.0 76 26303.0 77 26303.0 78 21478.0 79 16653.0 80 16653.0 81 16653.0 82 11855.5 83 7058.0 84 7058.0 85 7058.0 86 5197.5 87 3337.0 88 3337.0 89 3337.0 90 2211.5 91 1086.0 92 1086.0 93 1086.0 94 626.5 95 167.0 96 167.0 97 167.0 98 426.0 99 685.0 100 685.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009829746380482346 2 0.0038595323211709823 3 0.0048847205939820245 4 0.014352635819354588 5 0.035157927238166915 6 0.04553042035131393 7 0.0655517442673884 8 0.0867188668413105 9 0.09528220417890862 10 0.11753482021816006 11 0.11819817733586131 12 0.1328523391178074 13 0.12067069022911149 14 0.12416839139517269 15 0.11192643731395847 16 0.11059972307855595 17 0.12254015119717869 18 0.1273645665986424 19 0.13019891064700234 20 0.11910275522363577 21 0.1277263977537522 22 0.14937596186782065 23 0.1361691247063137 24 0.130741657379667 25 0.12832944967893514 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1658232.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.90890269984913 #Duplication Level Percentage of deduplicated Percentage of total 1 78.2485368154279 37.48801536695897 2 12.82957277464767 12.29301507482457 3 3.7455874254762973 5.383409505627669 4 1.5426854508815657 2.956334686510313 5 0.8042130224760163 1.9264481721877522 6 0.5323174809952982 1.5301647841459516 7 0.3551210913364178 1.1909423268050472 8 0.2687738310087645 1.0301327454451674 9 0.21214928220538992 0.9147455387118774 >10 1.2024511001710227 10.708660385643917 >50 0.11993937613213647 4.016446774402657 >100 0.11834038313155588 12.03578859392186 >500 0.01501319234218595 4.801913660879265 >1k 0.0052987737678303354 3.7239823839349144 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3443 0.2076307778404952 No Hit TATCAACGCAGAGTACTTTTTTTTT 2288 0.13797828048186261 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1914 0.11542413848001967 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1903 0.11476078136231842 No Hit GAATAGGACCGCGGTTCTATTTTGT 1886 0.11373559308950737 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1858 0.11204704769899507 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1851 0.111624911351367 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1832 0.11047911269351936 No Hit GTACATGGAAGCAGTGGTATCAACG 1798 0.10842873614789728 No Hit GAATAACGCCGCCGCATCGCCAGTC 1792 0.1080669049927875 No Hit GTATCTGATCGTCTTCGAACCTCCG 1784 0.10758446345264112 No Hit GTCCTATTCCATTATTCCTAGCTGC 1698 0.10239821689606762 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.2061038503659318E-4 0.0 5 0.0 0.0 0.0 1.2061038503659318E-4 0.0 6 0.0 0.0 0.0 1.2061038503659318E-4 0.0 7 0.0 0.0 0.0 1.2061038503659318E-4 0.0 8 0.0 0.0 0.0 1.2061038503659318E-4 0.0 9 0.0 0.0 0.0 1.2061038503659318E-4 0.0 10 0.0 0.0 0.0 3.01525962591483E-4 0.0 11 0.0 0.0 0.0 3.01525962591483E-4 0.0 12 0.0 0.0 0.0 3.01525962591483E-4 0.0 13 0.0 0.0 0.0 3.01525962591483E-4 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGCGC 40 0.0052826367 14.248641 4 GTATTAC 90 3.6670826E-8 13.714287 1 AATTTCG 70 7.2477415E-6 13.574234 18 CGAACGA 180 0.0 13.197172 16 ATTTCGG 60 4.0851478E-4 12.669285 19 AAAGCGT 75 1.4769577E-5 12.668138 10 GTACTAA 70 1.0968902E-4 12.207224 1 ATCGCCA 355 0.0 12.044742 16 TAAGACC 95 1.0410968E-6 11.998856 4 CGCCAGT 360 0.0 11.877455 18 GATAACG 200 0.0 11.875661 11 CGGAATT 120 1.0009899E-8 11.875302 15 CGCATCG 355 0.0 11.775303 13 GCATCGC 355 0.0 11.774947 14 CTTACAC 130 2.6284397E-9 11.688369 3 CGATAAC 205 0.0 11.586711 10 ATAACGA 205 0.0 11.585661 12 CGGTCCA 430 0.0 11.268749 10 CAACGGA 110 4.966696E-7 11.227558 14 GTTTTCG 220 0.0 11.227558 15 >>END_MODULE