##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062402_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 775178 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.191523753254092 32.0 32.0 32.0 32.0 32.0 2 31.415166581094923 32.0 32.0 32.0 32.0 32.0 3 31.503256026357818 32.0 32.0 32.0 32.0 32.0 4 31.60708895247285 32.0 32.0 32.0 32.0 32.0 5 31.546034588184906 32.0 32.0 32.0 32.0 32.0 6 35.150014577297085 36.0 36.0 36.0 36.0 36.0 7 35.15890414846655 36.0 36.0 36.0 36.0 36.0 8 35.09969065169548 36.0 36.0 36.0 36.0 36.0 9 35.20248897672535 36.0 36.0 36.0 36.0 36.0 10 35.09673262141082 36.0 36.0 36.0 36.0 36.0 11 35.21467198501505 36.0 36.0 36.0 36.0 36.0 12 35.11685316146743 36.0 36.0 36.0 36.0 36.0 13 35.15673948435069 36.0 36.0 36.0 36.0 36.0 14 35.133321637094966 36.0 36.0 36.0 36.0 36.0 15 35.10682836716212 36.0 36.0 36.0 36.0 36.0 16 35.105152623010454 36.0 36.0 36.0 36.0 36.0 17 35.08380397792507 36.0 36.0 36.0 36.0 36.0 18 35.09628240223536 36.0 36.0 36.0 36.0 36.0 19 35.064151717412 36.0 36.0 36.0 36.0 36.0 20 35.03647936344943 36.0 36.0 36.0 36.0 36.0 21 35.01496430497254 36.0 36.0 36.0 36.0 36.0 22 35.00244072974207 36.0 36.0 36.0 36.0 36.0 23 34.95652095389704 36.0 36.0 36.0 32.0 36.0 24 34.94510938132919 36.0 36.0 36.0 32.0 36.0 25 34.917378976183535 36.0 36.0 36.0 32.0 36.0 26 34.87434756920346 36.0 36.0 36.0 32.0 36.0 27 34.85204559468922 36.0 36.0 36.0 32.0 36.0 28 34.82934629207743 36.0 36.0 36.0 32.0 36.0 29 34.78982375660816 36.0 36.0 36.0 32.0 36.0 30 34.771759518458985 36.0 36.0 36.0 32.0 36.0 31 34.75853545895265 36.0 36.0 36.0 32.0 36.0 32 34.72086927131575 36.0 36.0 36.0 32.0 36.0 33 34.68208334085848 36.0 36.0 36.0 32.0 36.0 34 34.658831906994266 36.0 36.0 36.0 32.0 36.0 35 34.594312532089404 36.0 36.0 36.0 32.0 36.0 36 34.57335218491753 36.0 36.0 36.0 32.0 36.0 37 34.53051428188107 36.0 36.0 36.0 32.0 36.0 38 34.46934381522696 36.0 36.0 36.0 32.0 36.0 39 34.4166320509612 36.0 36.0 36.0 32.0 36.0 40 34.36938225801042 36.0 36.0 36.0 32.0 36.0 41 34.35190756187611 36.0 36.0 36.0 32.0 36.0 42 34.25372624094079 36.0 36.0 36.0 32.0 36.0 43 34.260785264803694 36.0 36.0 36.0 32.0 36.0 44 34.22346738426529 36.0 36.0 36.0 32.0 36.0 45 34.10201011896623 36.0 36.0 36.0 32.0 36.0 46 34.13473808596219 36.0 36.0 36.0 32.0 36.0 47 34.06241534202467 36.0 36.0 36.0 32.0 36.0 48 34.03320785677612 36.0 36.0 36.0 32.0 36.0 49 34.01665810949227 36.0 36.0 36.0 32.0 36.0 50 33.47027392418258 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 3.0 21 22.0 22 62.0 23 228.0 24 558.0 25 1414.0 26 2954.0 27 5611.0 28 9647.0 29 14622.0 30 20528.0 31 28396.0 32 41128.0 33 61956.0 34 129283.0 35 458763.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.18920906564412 18.151157719809355 12.210182979854412 25.44945023469211 2 15.339045805564371 20.97450028768774 37.603754647511565 26.082699259236325 3 19.259700737770793 24.84103548498206 28.43790998912501 27.461353788122132 4 12.23425389846951 16.074930080394644 35.866564496320834 35.82425152481501 5 13.924027771685987 37.20913132209635 33.34137449721225 15.525466409005414 6 33.58338439707163 35.317057438642884 17.198310059018933 13.901248105266554 7 29.271986563086156 30.883100397586105 21.044714891289484 18.80019814803826 8 28.003374708776562 33.20243866570001 20.065197928733788 18.728988696789642 9 27.380808020867462 14.578329106347187 18.813743424090983 39.22711944869437 10 15.871709465438904 27.40776957034384 31.633637693536194 25.086883270681053 11 37.12566662108574 21.558274357631408 21.873427780458165 19.44263124082469 12 24.236497939828013 24.200764211574633 29.30875231237213 22.25398553622523 13 30.132950109523232 19.819963930864912 25.523170162207904 24.52391579740395 14 23.677400545423115 19.96792994641231 25.472343126352914 30.88232638181166 15 25.131905188227737 27.259416546909225 23.61315723614447 23.995521028718567 16 25.131389177711444 25.953135924910146 25.16983196117537 23.74564293620304 17 23.303034915851583 26.013122147429364 26.49068988025976 24.19315305645929 18 24.59086816189314 24.736641132746286 28.142052535030665 22.530438170329912 19 24.9558165995423 25.894955739197968 25.940880675148158 23.20834698611158 20 24.836489167649237 24.3059013542696 27.210008539974044 23.647600938107118 21 25.988224640018164 24.946399407619925 24.88447814566461 24.180897806697303 22 24.556424459930493 25.420742074723485 25.88721558145355 24.135617883892476 23 23.515244240677625 24.839585230747 26.108584092943815 25.53658643563156 24 23.743191886250642 26.227782522207804 26.019056268366747 24.009969323174808 25 24.671107797176905 24.800755439395854 25.82671334841804 24.701423415009195 26 23.080247375441513 25.85070783742573 26.965677560508684 24.10336722662408 27 24.711098612189716 25.446542600538198 26.285575700032766 23.556783087239317 28 23.621155399147035 25.205694692057822 26.510556285137092 24.66259362365805 29 23.184481499732964 25.49698262850597 26.957808400135196 24.36072747162587 30 23.980685726375103 25.673458225078626 26.704060228747462 23.64179581979881 31 23.74809398615544 25.480083284097333 25.866188152914553 24.905634576832675 32 23.58064857361793 25.942944717213333 25.941138680406304 24.535268028762427 33 23.329738460069816 25.156028679864495 26.557255236861728 24.95697762320396 34 23.72758256813274 25.975453379739875 26.950713255536147 23.346250796591235 35 24.746058324668656 25.54393958548875 26.454569144119155 23.255432945723435 36 23.4128161531932 26.463341322896163 26.07272136206136 24.051121161849277 37 24.537977083972972 25.9397196514865 25.99454576884277 23.527757495697763 38 23.879934673068636 25.673329222449553 25.91172608097753 24.535010023504277 39 24.184380877682287 25.190343379198065 26.307635149604348 24.317640593515296 40 24.867965809143193 25.65513985175018 25.850578834796657 23.62631550430998 41 22.984140416781695 25.8029768646685 27.277347912350454 23.935534806199353 42 25.110361749172448 26.313053260025438 26.022668341980808 22.553916648821303 43 23.86200330762741 24.96316974939949 26.293831868293477 24.88099507467962 44 23.347411820252898 25.786077520259866 26.47404854110927 24.39246211837797 45 23.63134660684385 25.972486319271187 26.22481546173911 24.171351612145855 46 23.15148669271663 25.28170985465255 26.68874334506829 24.87806010756253 47 23.72890320533246 25.254103256417565 27.062980454786455 23.95401308346352 48 24.081952790197864 26.586538833661432 25.311089840010943 24.020418536129768 49 23.115365909979268 25.89344111086887 26.8720563174604 24.11913666169146 50 23.071762965103453 27.03292280343715 25.128841541996216 24.766472689463182 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 23.0 1 23.0 2 23.0 3 101.0 4 179.0 5 210.5 6 242.0 7 214.5 8 187.0 9 259.5 10 332.0 11 530.5 12 729.0 13 1210.0 14 1691.0 15 2317.5 16 2944.0 17 3437.5 18 3931.0 19 4246.0 20 4561.0 21 5050.5 22 5540.0 23 5904.5 24 6269.0 25 6377.5 26 6486.0 27 8184.0 28 9882.0 29 11504.5 30 13127.0 31 14456.5 32 15786.0 33 18110.5 34 20435.0 35 23254.0 36 26073.0 37 29045.5 38 32018.0 39 33465.0 40 34912.0 41 37163.0 42 39414.0 43 41001.5 44 42589.0 45 48431.0 46 54273.0 47 58478.0 48 62683.0 49 62188.5 50 61694.0 51 56405.0 52 51116.0 53 48991.5 54 46867.0 55 47345.0 56 47823.0 57 46455.5 58 45088.0 59 41330.0 60 37572.0 61 32911.0 62 28250.0 63 24562.0 64 20874.0 65 17963.0 66 15052.0 67 13191.0 68 11330.0 69 10551.5 70 9773.0 71 7537.5 72 5302.0 73 4664.5 74 4027.0 75 2955.5 76 1884.0 77 1698.0 78 1512.0 79 1321.5 80 1131.0 81 875.0 82 619.0 83 530.5 84 442.0 85 366.0 86 290.0 87 220.5 88 151.0 89 88.5 90 26.0 91 19.5 92 13.0 93 10.5 94 8.0 95 5.5 96 3.0 97 1.5 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015480315488829662 2 0.004128084130354577 3 6.450131453679026E-4 4 2.5800525814716104E-4 5 0.0 6 3.8700788722074157E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.2900262907358052E-4 47 1.2900262907358052E-4 48 0.0 49 1.2900262907358052E-4 50 1.2900262907358052E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 775178.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.278162751853095 #Duplication Level Percentage of deduplicated Percentage of total 1 81.64628119055813 49.21487825688025 2 11.856745169299732 14.294056300445943 3 3.0640739647597703 5.540902473945156 4 1.1915864822604583 2.8730657564241606 5 0.6054596733478399 1.8247998364872453 6 0.33820930361888907 1.2231981268638175 7 0.22920099628256904 0.9671070469765299 8 0.1476497985221159 0.7120046868475536 9 0.11346239997713749 0.6155374510833971 >10 0.6395669273416097 7.403837066730978 >50 0.08280988616113169 3.562926011047851 >100 0.07937640634539544 9.219271520261795 >500 0.005148739869404723 2.0412410884911303 >1k 4.290616557837269E-4 0.5071743775142359 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2073 0.2674224500695324 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 1849 0.23852586115705038 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 893 0.1151993477627074 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 892 0.11507034513363382 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 885 0.11416732673011877 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 838 0.10810420316366047 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 821 0.1059111584694096 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.2900262907358052E-4 2 0.0 0.0 0.0 0.0 1.2900262907358052E-4 3 0.0 0.0 0.0 0.0 1.2900262907358052E-4 4 0.0 0.0 0.0 0.0 1.2900262907358052E-4 5 0.0 0.0 0.0 0.0 1.2900262907358052E-4 6 0.0 0.0 0.0 0.0 2.5800525814716104E-4 7 0.0 0.0 0.0 0.0 2.5800525814716104E-4 8 0.0 0.0 0.0 0.0 2.5800525814716104E-4 9 0.0 0.0 0.0 0.0 2.5800525814716104E-4 10 0.0 0.0 0.0 0.0 2.5800525814716104E-4 11 0.0 0.0 0.0 0.0 2.5800525814716104E-4 12 0.0 0.0 0.0 0.0 3.8700788722074157E-4 13 0.0 0.0 0.0 0.0 5.160105162943221E-4 14 0.0 0.0 0.0 0.0 5.160105162943221E-4 15 0.0 0.0 0.0 0.0 9.030184035150636E-4 16 0.0 0.0 0.0 3.8700788722074157E-4 0.0011610236616622248 17 0.0 0.0 0.0 6.450131453679026E-4 0.0011610236616622248 18 0.0 0.0 0.0 6.450131453679026E-4 0.0011610236616622248 19 0.0 0.0 0.0 7.740157744414831E-4 0.0011610236616622248 20 0.0 0.0 0.0 0.0012900262907358051 0.0012900262907358051 21 0.0 0.0 0.0 0.0014190289198093857 0.0012900262907358051 22 0.0 0.0 0.0 0.0015480315488829663 0.0012900262907358051 23 0.0 0.0 0.0 0.0038700788722074156 0.0012900262907358051 24 0.0 0.0 0.0 0.008127165631635572 0.0012900262907358051 25 0.0 0.0 0.0 0.009417191922371377 0.0012900262907358051 26 0.0 0.0 0.0 0.012513255020137311 0.0014190289198093857 27 0.0 0.0 0.0 0.017028347037712627 0.0014190289198093857 28 0.0 0.0 0.0 0.029154594170629197 0.0014190289198093857 29 0.0 0.0 0.0 0.04605393857926825 0.0014190289198093857 30 0.0 0.0 0.0 0.08359370363968018 0.0014190289198093857 31 0.0 0.0 0.0 0.15699619958254749 0.0014190289198093857 32 0.0 0.0 0.0 0.24252494265833138 0.0014190289198093857 33 0.0 0.0 0.0 0.3191525043280382 0.0014190289198093857 34 0.0 0.0 0.0 0.4095833473086182 0.0014190289198093857 35 0.0 0.0 0.0 0.5167845320687635 0.0014190289198093857 36 0.0 0.0 0.0 0.6657825686487491 0.0014190289198093857 37 0.0 0.0 0.0 0.8840550170412473 0.0014190289198093857 38 0.0 0.0 0.0 1.1556055512411343 0.0015480315488829663 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTTATA 60 9.742875E-6 25.668097 2 ATACCTA 75 2.0628358E-6 23.466461 6 GATATAC 435 0.0 22.765762 1 ACTGTTC 465 0.0 22.236362 8 GTCCAAT 60 2.8654028E-4 22.006903 1 GCCGGTT 170 0.0 21.999807 21 ATGCCGG 180 0.0 20.777596 19 AACGAAT 265 0.0 20.754534 31 ATACACT 490 0.0 20.65288 4 CCGGCAT 55 0.0044824127 19.999826 44 CGTCTTA 55 0.0044824127 19.999826 15 GGGCGGA 55 0.0044824127 19.999826 20 CACTGTT 550 0.0 19.999825 7 AACGTAT 145 2.9467628E-10 19.723965 31 CGAATGT 260 0.0 19.461367 33 TGGTATA 205 0.0 19.316902 44 TCCAACG 400 0.0 19.249832 28 CCGTCCA 80 8.98388E-5 19.24983 9 TAGGACG 265 0.0 19.094172 4 TATGCGT 70 8.1202114E-4 18.856977 39 >>END_MODULE