##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062401_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2983971 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.34871552035861 32.0 32.0 32.0 32.0 32.0 2 31.466845689854225 32.0 32.0 32.0 32.0 32.0 3 31.54160848077947 32.0 32.0 32.0 32.0 32.0 4 31.627485320735357 32.0 32.0 32.0 32.0 32.0 5 31.569223025290796 32.0 32.0 32.0 32.0 32.0 6 35.19130916486789 36.0 36.0 36.0 36.0 36.0 7 35.203566656646466 36.0 36.0 36.0 36.0 36.0 8 35.139858262697594 36.0 36.0 36.0 36.0 36.0 9 35.27875941153584 36.0 36.0 36.0 36.0 36.0 10 35.155184819155416 36.0 36.0 36.0 36.0 36.0 11 35.273030468459645 36.0 36.0 36.0 36.0 36.0 12 35.193483113609346 36.0 36.0 36.0 36.0 36.0 13 35.23510114541998 36.0 36.0 36.0 36.0 36.0 14 35.200187267235506 36.0 36.0 36.0 36.0 36.0 15 35.16113293326242 36.0 36.0 36.0 36.0 36.0 16 35.17851513972489 36.0 36.0 36.0 36.0 36.0 17 35.15361710954966 36.0 36.0 36.0 36.0 36.0 18 35.16419328472026 36.0 36.0 36.0 36.0 36.0 19 35.153737754153774 36.0 36.0 36.0 36.0 36.0 20 35.147332866170615 36.0 36.0 36.0 36.0 36.0 21 35.14416695068417 36.0 36.0 36.0 36.0 36.0 22 35.13392556429 36.0 36.0 36.0 36.0 36.0 23 35.09385915613791 36.0 36.0 36.0 36.0 36.0 24 35.07654766081842 36.0 36.0 36.0 36.0 36.0 25 35.0521556677327 36.0 36.0 36.0 36.0 36.0 26 35.01084226354747 36.0 36.0 36.0 36.0 36.0 27 34.99314470549479 36.0 36.0 36.0 36.0 36.0 28 34.988496201873275 36.0 36.0 36.0 36.0 36.0 29 34.96784050515236 36.0 36.0 36.0 36.0 36.0 30 34.950280012774925 36.0 36.0 36.0 36.0 36.0 31 34.952323933443054 36.0 36.0 36.0 36.0 36.0 32 34.917961669198526 36.0 36.0 36.0 32.0 36.0 33 34.911656313013765 36.0 36.0 36.0 32.0 36.0 34 34.90369309889406 36.0 36.0 36.0 32.0 36.0 35 34.881314865325436 36.0 36.0 36.0 32.0 36.0 36 34.859207076744376 36.0 36.0 36.0 32.0 36.0 37 34.85220332235132 36.0 36.0 36.0 32.0 36.0 38 34.821019708301456 36.0 36.0 36.0 32.0 36.0 39 34.807077883799806 36.0 36.0 36.0 32.0 36.0 40 34.812499853383294 36.0 36.0 36.0 32.0 36.0 41 34.78671273950049 36.0 36.0 36.0 32.0 36.0 42 34.77467207288543 36.0 36.0 36.0 32.0 36.0 43 34.759942707218 36.0 36.0 36.0 32.0 36.0 44 34.726909879486094 36.0 36.0 36.0 32.0 36.0 45 34.70950957633301 36.0 36.0 36.0 32.0 36.0 46 34.69025201652429 36.0 36.0 36.0 32.0 36.0 47 34.67222369118198 36.0 36.0 36.0 32.0 36.0 48 34.631987375212425 36.0 36.0 36.0 32.0 36.0 49 34.61819937258103 36.0 36.0 36.0 32.0 36.0 50 34.126134268731164 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 4.0 20 15.0 21 48.0 22 176.0 23 494.0 24 1397.0 25 3473.0 26 7075.0 27 13761.0 28 23610.0 29 38149.0 30 57603.0 31 84903.0 32 128529.0 33 218315.0 34 499383.0 35 1907034.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.271853706753205 17.807652589067757 11.599112045737085 26.32138165844195 2 16.424769282277442 19.156851856382428 37.321861319018 27.09651754232213 3 19.56356653574445 21.99835118433223 28.290459657636163 30.147622622287162 4 12.619115840835935 14.705836026897098 35.20580837911973 37.469239753147235 5 14.61780292100694 36.28409927576374 33.39791170892747 15.700186094301854 6 36.21159003860308 34.592331865149625 15.552425485738913 13.643652610508388 7 31.500909358703556 29.88035071386418 19.341273759027818 19.27746616840445 8 28.367266303861534 34.17050634875473 18.261370502595366 19.200856844788373 9 26.80863855580366 14.164179209516448 18.403630598286647 40.62355163639325 10 16.07978093620883 26.827707105732596 31.293266590057346 25.799245368001227 11 38.46227057836688 20.746381248343233 21.49685771074853 19.294490462541358 12 24.60131147387156 23.24225000846188 28.631511499273955 23.524927018392606 13 29.85199923189602 19.085172074393483 25.21143804681748 25.85139064689302 14 22.810912036343517 19.715171494629136 24.55992367218046 32.913992796846884 15 25.07356807422056 28.097223464973354 21.5360001823074 25.293208278498685 16 25.67253502128539 26.090166425880145 23.928248632443143 24.309049920391317 17 23.952042429366774 26.552335796829123 24.9619383030197 24.5336834707844 18 24.673363112443116 25.190392265876575 26.519996340447012 23.616248281233297 19 25.6240090805172 24.839785641348392 25.02319895200054 24.513006326133866 20 25.620959453024174 24.8137130019025 25.01639593682378 24.548931608249543 21 26.264698953173472 24.264277367306857 24.536967685007664 24.93405599451201 22 25.617876313141114 24.83569712976433 25.095150053401994 24.45127650369256 23 24.30888235844115 24.687639390597294 25.748340047540673 25.25513820342088 24 24.869745718038143 24.929062648397053 25.50658166584059 24.69460996772422 25 24.801346929980216 24.874906626103268 25.446929611581346 24.876816832335166 26 24.173190691196396 25.80581379644775 25.853770026585376 24.167225485770473 27 24.930537193558518 25.06170468814878 25.35332950621839 24.654428612074312 28 24.292796411225176 25.26720266383286 25.501722369285762 24.938278555656204 29 24.314445415186675 24.956274709104076 25.382183674037044 25.347096201672205 30 24.023323282967564 25.441902753076352 25.88962828392099 24.645145680035093 31 25.126216038962845 24.902922984171095 24.977823175895473 24.993037800970587 32 24.635259524975275 25.160968387427356 24.92872752449672 25.275044563100646 33 24.21585196370876 24.9630442118908 25.63051048418366 25.190593340216775 34 24.97091962354862 25.031308950388592 25.68064501967345 24.317126406389338 35 24.999941353317443 25.010799367688225 25.798809706930797 24.190449572063535 36 23.957638998502333 25.485938033580087 25.595322474648714 24.96110049326887 37 25.025477794522804 24.90922331349735 25.08858162495547 24.97671726702438 38 24.401242505372874 25.03271647076999 25.50376662507779 25.062274398779344 39 25.357853678872882 24.491223272612235 25.12645062569308 25.024472422821802 40 25.36375185951874 24.71290773268239 25.620791891074006 24.302548516724862 41 24.500137568361087 24.863378363931822 26.32207216491045 24.314411902796643 42 25.2820486526176 25.346928639722034 25.530777611444616 23.84024509621575 43 24.41441287465595 24.59896560656923 25.88614299535753 25.100478523417287 44 23.83669278287222 25.15751661125393 25.613653751996917 25.392136853876927 45 24.002646138317026 25.26167311947737 25.65648258645945 25.079198155746152 46 24.129974714850878 24.648445943568372 25.769739256325057 25.45184008525569 47 24.446015058457338 24.638074565738073 26.018986109449454 24.896924266355136 48 24.664348279524166 25.178193755904466 25.193542430539708 24.963915534031663 49 24.204524775877516 25.135968144462527 25.421996393396583 25.23751068626337 50 23.805258161021 25.62112701497434 25.423973624408546 25.149641199596108 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 10.0 1 23.0 2 36.0 3 90.0 4 144.0 5 181.5 6 219.0 7 225.5 8 232.0 9 346.0 10 460.0 11 710.5 12 961.0 13 1674.5 14 2388.0 15 3372.0 16 4356.0 17 5083.0 18 5810.0 19 6393.5 20 6977.0 21 8405.5 22 9834.0 23 11313.5 24 12793.0 25 15380.0 26 17967.0 27 23270.5 28 28574.0 29 34537.0 30 40500.0 31 46764.5 32 53029.0 33 62197.5 34 71366.0 35 83678.5 36 95991.0 37 107515.5 38 119040.0 39 126167.0 40 133294.0 41 140867.0 42 148440.0 43 154647.5 44 160855.0 45 174365.0 46 187875.0 47 199803.5 48 211732.0 49 220429.5 50 229127.0 51 225937.5 52 222748.0 53 219557.0 54 216366.0 55 215156.5 56 213947.0 57 203508.5 58 193070.0 59 179424.0 60 165778.0 61 145962.5 62 126147.0 63 109690.5 64 93234.0 65 79590.0 66 65946.0 67 56829.0 68 47712.0 69 42651.5 70 37591.0 71 29087.0 72 20583.0 73 18264.5 74 15946.0 75 11747.5 76 7549.0 77 6709.0 78 5869.0 79 4888.0 80 3907.0 81 3149.0 82 2391.0 83 1973.5 84 1556.0 85 1277.5 86 999.0 87 722.5 88 446.0 89 269.5 90 93.0 91 70.0 92 47.0 93 31.0 94 15.0 95 11.0 96 7.0 97 9.5 98 12.0 99 7.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01621999677610808 2 0.0043566107043265506 3 3.686362903660927E-4 4 2.0107434019968692E-4 5 0.0 6 4.0214868039937385E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.0107434019968692E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2983971.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.369372745760835 #Duplication Level Percentage of deduplicated Percentage of total 1 76.08959794476996 40.60854114789505 2 13.997539724036887 14.940798301114377 3 4.389808737730597 7.028440164196262 4 1.8608398792382388 3.9724742854096857 5 0.9407349638193143 2.510321746952141 6 0.5752208232206778 1.8419504715352653 7 0.39919690530727614 1.4913421906808748 8 0.2888545648468351 1.2332789552500227 9 0.20392829029004925 0.9795172444105824 >10 1.1131274246043426 10.618938075387508 >50 0.07430854911205102 2.764909797235969 >100 0.05523528773274549 6.083238929091108 >500 0.008263611919201146 3.0452524006468082 >1k 0.0033432933717534715 2.880996290194474 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 3527 0.11819819964738264 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 3125 0.1047262188540036 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 3065 0.10271547545200675 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.70247800665623E-5 2 0.0 0.0 0.0 0.0 6.70247800665623E-5 3 0.0 0.0 0.0 0.0 6.70247800665623E-5 4 0.0 0.0 0.0 0.0 6.70247800665623E-5 5 0.0 0.0 0.0 0.0 6.70247800665623E-5 6 0.0 0.0 0.0 0.0 6.70247800665623E-5 7 0.0 0.0 0.0 0.0 6.70247800665623E-5 8 0.0 0.0 0.0 0.0 6.70247800665623E-5 9 0.0 0.0 0.0 0.0 6.70247800665623E-5 10 0.0 0.0 0.0 0.0 6.70247800665623E-5 11 0.0 0.0 0.0 0.0 6.70247800665623E-5 12 0.0 0.0 0.0 3.351239003328115E-5 2.345867302329681E-4 13 0.0 0.0 0.0 3.351239003328115E-5 2.680991202662492E-4 14 0.0 0.0 0.0 6.70247800665623E-5 2.680991202662492E-4 15 0.0 0.0 0.0 6.70247800665623E-5 3.686362903660927E-4 16 0.0 0.0 0.0 1.6756195016640578E-4 3.686362903660927E-4 17 0.0 0.0 0.0 2.0107434019968692E-4 4.35661070432655E-4 18 0.0 0.0 0.0 3.016115102995304E-4 4.35661070432655E-4 19 0.0 0.0 0.0 3.3512390033281156E-4 4.35661070432655E-4 20 0.0 0.0 0.0 4.0214868039937385E-4 4.691734604659362E-4 21 0.0 0.0 0.0 4.691734604659362E-4 4.691734604659362E-4 22 0.0 0.0 0.0 8.7132214086531E-4 4.691734604659362E-4 23 0.0 0.0 0.0 0.0013404956013312462 4.691734604659362E-4 24 0.0 0.0 0.0 0.0018096690617971822 4.691734604659362E-4 25 0.0 0.0 0.0 0.0021447929621299937 4.691734604659362E-4 26 0.0 0.0 0.0 0.0029155779328954605 4.691734604659362E-4 27 0.0 0.0 0.0 0.004289585924259987 4.691734604659362E-4 28 0.0 0.0 0.0 0.0110255763209495 4.691734604659362E-4 29 0.0 0.0 0.0 0.0261396642259593 4.691734604659362E-4 30 0.0 0.0 0.0 0.053619824053249845 4.691734604659362E-4 31 0.0 0.0 0.0 0.10596617728523501 4.691734604659362E-4 32 0.0 0.0 0.0 0.16836624752720453 5.026858504992173E-4 33 0.0 0.0 0.0 0.23180520186020576 5.361982405324984E-4 34 0.0 0.0 0.0 0.3042254767221263 6.36735410632342E-4 35 0.0 0.0 0.0 0.3868000057641311 6.36735410632342E-4 36 0.0 0.0 0.0 0.5054673788719797 6.36735410632342E-4 37 0.0 0.0 0.0 0.6783577990536771 6.36735410632342E-4 38 0.0 0.0 0.0 0.9057393654294897 6.36735410632342E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3945 0.0 21.19583 1 TAGGACG 1435 0.0 20.850357 4 GTCCTAC 1750 0.0 20.747211 1 GCGAAAT 150 2.1827873E-11 20.533169 12 TGTAGGA 2170 0.0 20.379084 2 GTAGGAC 2070 0.0 20.299696 3 CGCAATA 680 0.0 19.41161 36 CTGTAGG 2215 0.0 19.173323 1 TTAGGAC 1080 0.0 19.148315 3 TCCTACA 1925 0.0 19.08684 2 GGTATCA 2160 0.0 18.031563 1 GGCGTTA 650 0.0 17.938318 42 CTAGCGG 760 0.0 17.657753 29 TATGGCG 1920 0.0 17.645693 16 AGAGCGA 1110 0.0 17.441301 15 TGGCGAG 1930 0.0 17.440275 18 AAGACGG 1175 0.0 17.412918 5 ACCGTTA 190 3.274181E-11 17.368282 8 CGGACCA 1115 0.0 17.363089 9 CCTACAG 2030 0.0 17.340054 3 >>END_MODULE