##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062400_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1312239 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.20569880943944 32.0 32.0 32.0 32.0 32.0 2 30.96059787889249 32.0 32.0 32.0 32.0 32.0 3 30.96327422062597 32.0 32.0 32.0 32.0 32.0 4 30.91759351764427 32.0 32.0 32.0 32.0 32.0 5 30.879406114282535 32.0 32.0 32.0 32.0 32.0 6 34.3682027435551 36.0 36.0 36.0 32.0 36.0 7 34.337100939691624 36.0 36.0 36.0 32.0 36.0 8 34.329869787439634 36.0 36.0 36.0 32.0 36.0 9 34.431517429370714 36.0 36.0 36.0 32.0 36.0 10 34.18804196491645 36.0 36.0 36.0 32.0 36.0 11 34.429889677109124 36.0 36.0 36.0 32.0 36.0 12 34.25537116333229 36.0 36.0 36.0 32.0 36.0 13 34.359828506849745 36.0 36.0 36.0 32.0 36.0 14 34.26900739880464 36.0 36.0 36.0 32.0 36.0 15 34.214311569767396 36.0 36.0 36.0 32.0 36.0 16 34.2200536640048 36.0 36.0 36.0 32.0 36.0 17 34.15260253658061 36.0 36.0 36.0 32.0 36.0 18 34.16557654512631 36.0 36.0 36.0 32.0 36.0 19 34.148129266086436 36.0 36.0 36.0 32.0 36.0 20 34.11949728669853 36.0 36.0 36.0 32.0 36.0 21 34.10286312173316 36.0 36.0 36.0 32.0 36.0 22 34.05664364494577 36.0 36.0 36.0 32.0 36.0 23 34.038124152688646 36.0 36.0 36.0 32.0 36.0 24 34.00893739631272 36.0 36.0 36.0 32.0 36.0 25 33.43143817551528 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 11.0 4 55.0 5 123.0 6 200.0 7 45.0 8 200.0 9 220.0 10 146.0 11 55.0 12 96.0 13 73.0 14 211.0 15 408.0 16 633.0 17 895.0 18 1072.0 19 1415.0 20 1720.0 21 2364.0 22 3004.0 23 4330.0 24 5991.0 25 8482.0 26 11844.0 27 16285.0 28 22572.0 29 31634.0 30 43118.0 31 62261.0 32 97076.0 33 149656.0 34 343801.0 35 502242.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.93884761594108 17.619797398432475 11.14506772184506 26.296287263781387 2 17.285690225811443 20.030467893257207 36.41934429252836 26.264497588402996 3 19.19013172133971 23.501254416368685 28.38037013665975 28.92824372563186 4 13.08838671962233 15.279019481860704 35.43250553907995 36.20008825943701 5 15.161679349044132 35.84000231743703 33.23319057717904 15.765127756339792 6 34.26875876270425 35.0059123237834 16.75364250225095 13.971686411261395 7 30.134224400748522 30.223748004020173 20.85450050557197 18.787527089659335 8 28.071984532249267 32.27062462102867 19.74395838656411 19.913432460157956 9 27.4790201842532 14.135918390385516 18.73584119869842 39.64922022666286 10 16.296812261156095 26.230353670175877 31.21623570179006 26.25659836687797 11 37.39823255962994 21.054864199452357 22.17608942946146 19.37081381145624 12 24.67507792559584 23.64367495965419 28.427257362395036 23.253989752354936 13 29.285008564028033 19.354245583517393 25.233021671377838 26.12772418107674 14 23.52970349153934 19.679869744417672 24.891008610968264 31.899418153074727 15 25.344427855724415 26.95428811631397 22.05574165946367 25.645542368497942 16 25.93264224987641 25.45728078901916 23.638380460057736 24.971696501046694 17 24.23816078202777 25.576357882079343 25.046236811826855 25.13924452406603 18 25.083761072446936 24.507753478821858 26.120712085477116 24.28777336325409 19 25.709059943320987 24.776008021133304 25.22498393789421 24.289948097651497 20 25.730009430305767 24.202391452297604 24.768514986251287 25.29908413114534 21 26.901756535791865 24.01664592538786 24.18824789732266 24.893349641497615 22 25.97641061255328 24.237160726073867 24.708414260475376 25.07801440089748 23 24.64588283953048 23.95161327246837 25.294442638438024 26.108061249563125 24 24.774190791516883 24.816159217525406 25.03363197047865 25.376018020479062 25 24.859336443420972 24.41685856731478 25.19079426266659 25.53301072659766 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 104.0 1 104.0 2 351.5 3 599.0 4 599.0 5 599.0 6 1368.5 7 2138.0 8 2138.0 9 2138.0 10 2423.0 11 2708.0 12 2708.0 13 2708.0 14 3306.0 15 3904.0 16 3904.0 17 3904.0 18 6329.0 19 8754.0 20 8754.0 21 8754.0 22 14027.0 23 19300.0 24 19300.0 25 19300.0 26 28694.5 27 38089.0 28 38089.0 29 38089.0 30 47162.0 31 56235.0 32 56235.0 33 56235.0 34 69445.0 35 82655.0 36 82655.0 37 82655.0 38 93201.0 39 103747.0 40 103747.0 41 103747.0 42 118116.5 43 132486.0 44 132486.0 45 132486.0 46 149017.0 47 165548.0 48 165548.0 49 165548.0 50 168578.5 51 171609.0 52 171609.0 53 171609.0 54 160148.0 55 148687.0 56 148687.0 57 148687.0 58 137749.0 59 126811.0 60 126811.0 61 126811.0 62 113431.5 63 100052.0 64 100052.0 65 100052.0 66 83734.5 67 67417.0 68 67417.0 69 67417.0 70 52004.0 71 36591.0 72 36591.0 73 36591.0 74 29128.0 75 21665.0 76 21665.0 77 21665.0 78 17617.0 79 13569.0 80 13569.0 81 13569.0 82 9579.0 83 5589.0 84 5589.0 85 5589.0 86 4090.0 87 2591.0 88 2591.0 89 2591.0 90 1693.0 91 795.0 92 795.0 93 795.0 94 455.0 95 115.0 96 115.0 97 115.0 98 298.0 99 481.0 100 481.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008154002434007828 2 0.0028958139485261453 3 0.005715422266827918 4 0.015088714784425705 5 0.03391150544984564 6 0.04358962048834092 7 0.06500340258138951 8 0.0856551283721944 9 0.092742251983061 10 0.1141560340761096 11 0.11659461424328953 12 0.12909233760008657 13 0.1161373804619433 14 0.12078592390562999 15 0.10988851878354478 16 0.11026954693466662 17 0.12154798020787372 18 0.12695857995380413 19 0.12962577701165717 20 0.11971904508248879 21 0.12558687860976545 22 0.14509551994720474 23 0.13694151751319691 24 0.13183574028816397 25 0.12688237432357977 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1312239.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.81354844165855 #Duplication Level Percentage of deduplicated Percentage of total 1 82.50679410544282 46.875037436755235 2 10.988378557335226 12.48577554924894 3 2.7645836549422973 4.711974222032449 4 1.1694849561383156 2.6577036082942045 5 0.6170353615934299 1.7527984203052314 6 0.3820370295635724 1.3022927571370417 7 0.2608046246345854 1.0372065322839916 8 0.18227547833792548 0.828457337462257 9 0.13714430325619953 0.7012489064889241 >10 0.8030711434908009 8.61297118666772 >50 0.0884059318037904 3.5063615866660585 >100 0.08978506897366056 10.724691419539605 >500 0.007649838365472118 2.9469910486780804 >1k 0.002549946121824039 1.8564899884402044 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2366 0.1803025211108647 No Hit TATCAACGCAGAGTACTTTTTTTTT 1594 0.12147177457764935 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1591 0.12124315768697624 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1431 0.10905025685107668 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1376 0.1048589471887362 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1347 0.1026489839122294 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.620563022437223E-5 2 0.0 0.0 0.0 0.0 7.620563022437223E-5 3 0.0 0.0 0.0 0.0 7.620563022437223E-5 4 0.0 0.0 0.0 0.0 7.620563022437223E-5 5 0.0 0.0 0.0 0.0 7.620563022437223E-5 6 0.0 0.0 0.0 0.0 7.620563022437223E-5 7 0.0 0.0 0.0 0.0 7.620563022437223E-5 8 0.0 0.0 0.0 0.0 7.620563022437223E-5 9 0.0 0.0 0.0 0.0 1.5241126044874447E-4 10 0.0 0.0 0.0 0.0 1.5241126044874447E-4 11 0.0 0.0 0.0 0.0 1.5241126044874447E-4 12 0.0 0.0 0.0 0.0 2.286168906731167E-4 13 0.0 0.0 0.0 0.0 2.286168906731167E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATACG 35 0.0021760156 16.278917 2 CGTTATT 115 1.8189894E-12 14.8633585 2 GCGTTAT 110 1.2732926E-11 14.67569 1 CGAACGA 100 6.566552E-10 14.253291 16 ATACGCG 55 1.9635586E-4 13.815047 4 TAACGAA 105 1.36788E-9 13.573009 13 GCACCGT 65 5.4491655E-5 13.154374 6 ATAACGA 110 2.743036E-9 12.955066 12 CGCGTAT 60 4.0898804E-4 12.667175 7 ACGCGTA 60 4.0898804E-4 12.667175 6 ATTGGAC 60 4.1030603E-4 12.662346 3 GTTATAC 60 4.1057006E-4 12.66138 1 AACGAAC 115 5.311449E-9 12.392748 14 ACTCTAA 180 0.0 12.138913 10 GAGCGTT 55 0.0030670832 12.091394 7 ATATACG 215 0.0 11.930712 6 ACGAACG 120 9.982614E-9 11.876837 15 GCATCGC 200 0.0 11.876384 14 CGCATCG 185 0.0 11.812186 13 CGGTTCT 315 0.0 11.762377 12 >>END_MODULE