SRR4062399_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062399_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1199621
Sequences flagged as poor quality	0
Sequence length	25
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	4286	0.35727950744443454	No Hit
GTACATGGAAGCAGTGGTATCAACG	4088	0.3407742945480281	No Hit
TCCATGTACTCTGCGTTGATACCAC	3465	0.28884122568711285	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	3324	0.2770875134730052	No Hit
TATCAACGCAGAGTACTTTTTTTTT	3044	0.25374680836697594	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	2362	0.19689551950157594	No Hit
ACGCAGAGTACTTTTTTTTTTTTTT	1821	0.15179794285028356	No Hit
GAGTACATGGAAGCAGTGGTATCAA	1721	0.14346197674098735	No Hit
GGTATCAACGCAGAGTACTTTTTTT	1497	0.1247894126561639	No Hit
CATGTACTCTGCGTTGATACCACTG	1489	0.1241225353674202	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCGTAA	40	2.7585597E-4	16.626497	10
TCGCGTA	40	2.759438E-4	16.625803	9
GCGTAAC	45	6.758254E-4	14.778492	11
CGAACGA	80	1.2848432E-7	14.252473	16
TCGCCAG	130	1.8189894E-12	13.887605	17
ATCGCCA	145	0.0	13.761008	16
TCTATAC	120	5.2750693E-11	13.452807	3
GATTGCG	85	2.6943053E-7	13.412973	10
CGACCAT	110	2.739398E-9	12.955712	10
CGCCAGT	145	7.2759576E-12	12.451476	18
AACCGCG	85	3.93538E-6	12.295738	7
GCATCGC	155	1.8189894E-12	12.259169	14
TAGTACT	70	1.0917061E-4	12.212837	4
GGTCGCG	55	0.0030647132	12.092503	7
CGGAATT	55	0.0030656715	12.091998	15
CGACTTT	110	3.805326E-8	12.091998	13
ACGAACG	95	1.0379717E-6	12.0010805	15
CGTCGTA	120	9.988071E-9	11.87607	10
CTATACC	90	7.466313E-6	11.609734	4
CGTCTTA	140	6.7848305E-10	11.536754	15