##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062399_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1199621 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.080114469486613 32.0 32.0 32.0 32.0 32.0 2 30.773619334773233 32.0 32.0 32.0 32.0 32.0 3 30.78547307858065 32.0 32.0 32.0 32.0 32.0 4 30.822821541136744 32.0 32.0 32.0 32.0 32.0 5 30.661375551111558 32.0 32.0 32.0 32.0 32.0 6 34.27238269420092 36.0 36.0 36.0 32.0 36.0 7 34.126008964497956 36.0 36.0 36.0 32.0 36.0 8 34.121188275296944 36.0 36.0 36.0 32.0 36.0 9 34.25338419384122 36.0 36.0 36.0 32.0 36.0 10 33.969397834816164 36.0 36.0 36.0 32.0 36.0 11 34.29228981486653 36.0 36.0 36.0 32.0 36.0 12 34.07397753123695 36.0 36.0 36.0 32.0 36.0 13 34.18904387302323 36.0 36.0 36.0 32.0 36.0 14 34.10924783744199 36.0 36.0 36.0 32.0 36.0 15 34.06633094952489 36.0 36.0 36.0 32.0 36.0 16 34.054261304195244 36.0 36.0 36.0 32.0 36.0 17 33.98756107137171 36.0 36.0 36.0 32.0 36.0 18 34.00268251389397 36.0 36.0 36.0 32.0 36.0 19 33.96983964101995 36.0 36.0 36.0 32.0 36.0 20 33.95057605693798 36.0 36.0 36.0 32.0 36.0 21 33.91260739850336 36.0 36.0 36.0 32.0 36.0 22 33.87454120926526 36.0 36.0 36.0 32.0 36.0 23 33.850129332514186 36.0 36.0 36.0 32.0 36.0 24 33.830697361916805 36.0 36.0 36.0 32.0 36.0 25 33.35380257598025 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 8.0 4 52.0 5 116.0 6 198.0 7 66.0 8 158.0 9 205.0 10 165.0 11 50.0 12 101.0 13 64.0 14 324.0 15 406.0 16 598.0 17 758.0 18 1051.0 19 1486.0 20 2130.0 21 2913.0 22 4147.0 23 5895.0 24 7833.0 25 10686.0 26 14594.0 27 18748.0 28 25250.0 29 33424.0 30 43180.0 31 58846.0 32 84472.0 33 121146.0 34 268047.0 35 492504.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.382713990954755 17.784122881974117 11.417519434776265 25.415643692294864 2 16.12278004895063 20.691727743802808 37.951742949175376 25.233749258071185 3 18.90733569811887 25.19663705821791 28.505141532831196 27.390885710832023 4 12.19186430899318 15.814331962405506 36.552248524508705 35.44155520409261 5 13.847862724708069 37.32724466233644 34.01711354632007 14.807779066635424 6 32.872669227548776 35.98500833148467 17.650070971906466 13.492251469060085 7 29.021755722962165 31.16629727288121 21.632684384777917 18.1792626193787 8 27.611740431634992 33.17250131199215 20.336587518845548 18.879170737527314 9 27.450483008143173 14.486322487727662 19.200668876785986 38.862525627343175 10 15.525708286108694 27.326415028201247 32.56371779057132 24.584158895118737 11 36.34324154018854 21.699265126255565 22.93866036814629 19.018832965409604 12 24.27067282570771 24.334611551373847 29.817565954548414 21.57714966837003 13 29.403659234802294 20.423744798334802 25.760949578274943 24.411646388587968 14 22.937511893673065 20.5218860277302 26.186279124892746 30.35432295370398 15 24.596258985120564 28.20875106719823 23.596034487507 23.598955460174206 16 24.68654758367911 26.431733134824597 25.23266915247674 23.649050129019553 17 22.82280101692482 26.519336094320945 26.783499510066587 23.874363378687647 18 23.71322041085131 25.25839928083075 28.27789180576087 22.750488502557072 19 24.570181259677547 26.05840543236464 26.439038234398023 22.932375073559793 20 24.686996358549727 24.979030154012563 26.966679436363926 23.36729405107378 21 25.52773608938585 24.94595348076278 25.359962338549064 24.166348091302307 22 24.54095390754794 25.763434935423813 25.93374575266528 23.76186540436296 23 23.184397648594818 25.531211547997284 26.52434799594631 24.760042807461588 24 23.586507399894824 26.313324819071948 26.46858487967345 23.631582901359778 25 24.05449261039336 25.55227981843587 26.396329319535173 23.996898251635596 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 446.0 1 446.0 2 832.5 3 1219.0 4 1219.0 5 1219.0 6 3140.0 7 5061.0 8 5061.0 9 5061.0 10 5059.0 11 5057.0 12 5057.0 13 5057.0 14 5072.0 15 5087.0 16 5087.0 17 5087.0 18 8255.5 19 11424.0 20 11424.0 21 11424.0 22 17569.0 23 23714.0 24 23714.0 25 23714.0 26 34222.0 27 44730.0 28 44730.0 29 44730.0 30 54595.0 31 64460.0 32 64460.0 33 64460.0 34 75227.0 35 85994.0 36 85994.0 37 85994.0 38 94583.5 39 103173.0 40 103173.0 41 103173.0 42 115078.5 43 126984.0 44 126984.0 45 126984.0 46 146890.0 47 166796.0 48 166796.0 49 166796.0 50 160549.0 51 154302.0 52 154302.0 53 154302.0 54 138511.0 55 122720.0 56 122720.0 57 122720.0 58 111039.0 59 99358.0 60 99358.0 61 99358.0 62 87279.5 63 75201.0 64 75201.0 65 75201.0 66 62236.5 67 49272.0 68 49272.0 69 49272.0 70 37484.5 71 25697.0 72 25697.0 73 25697.0 74 19853.0 75 14009.0 76 14009.0 77 14009.0 78 11242.5 79 8476.0 80 8476.0 81 8476.0 82 6031.5 83 3587.0 84 3587.0 85 3587.0 86 2597.5 87 1608.0 88 1608.0 89 1608.0 90 1081.0 91 554.0 92 554.0 93 554.0 94 345.5 95 137.0 96 137.0 97 137.0 98 346.0 99 555.0 100 555.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00800252746492434 2 0.0037511847491832834 3 0.006335334243065102 4 0.015838335607662752 5 0.037845286136204685 6 0.04626461190659383 7 0.0675213254852991 8 0.0885279600807255 9 0.09953143534499646 10 0.12062142960151581 11 0.12137166655135245 12 0.13329209808764603 13 0.12062142960151581 14 0.1254562899449076 15 0.11586992891921698 16 0.1127856214587774 17 0.12495613197834983 18 0.13104138723813605 19 0.13470921232622637 20 0.12270542112883986 21 0.13162490486578676 22 0.15096434623935392 23 0.1416280641969422 24 0.1359596072426208 25 0.13229178215453047 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1199621.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.0561013108172 #Duplication Level Percentage of deduplicated Percentage of total 1 79.47112764479314 43.753704548966176 2 12.856921810789215 14.157039795201326 3 3.589668997984548 5.928995400760108 4 1.4047373059237944 3.093574377200994 5 0.7067707470445922 1.9456020926404514 6 0.4225923805925155 1.3959773351448574 7 0.26002066333996326 1.0021006788625635 8 0.1841759904259052 0.8112009590326988 9 0.139645057166763 0.6919481173435348 >10 0.768761378328398 8.042308696884401 >50 0.09143836429475595 3.53054854517178 >100 0.0942722029016231 10.176501352710583 >500 0.00819757917537129 3.1183335235055654 >1k 0.001669877239427485 2.352164576575104 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4286 0.35727950744443454 No Hit GTACATGGAAGCAGTGGTATCAACG 4088 0.3407742945480281 No Hit TCCATGTACTCTGCGTTGATACCAC 3465 0.28884122568711285 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 3324 0.2770875134730052 No Hit TATCAACGCAGAGTACTTTTTTTTT 3044 0.25374680836697594 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 2362 0.19689551950157594 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 1821 0.15179794285028356 No Hit GAGTACATGGAAGCAGTGGTATCAA 1721 0.14346197674098735 No Hit GGTATCAACGCAGAGTACTTTTTTT 1497 0.1247894126561639 No Hit CATGTACTCTGCGTTGATACCACTG 1489 0.1241225353674202 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 8.335966109296187E-5 0.0 5 0.0 0.0 0.0 8.335966109296187E-5 0.0 6 0.0 0.0 0.0 8.335966109296187E-5 8.335966109296187E-5 7 0.0 0.0 0.0 8.335966109296187E-5 8.335966109296187E-5 8 0.0 0.0 0.0 1.6671932218592373E-4 8.335966109296187E-5 9 0.0 0.0 0.0 2.500789832788856E-4 8.335966109296187E-5 10 8.335966109296187E-5 0.0 0.0 5.83517627650733E-4 8.335966109296187E-5 11 8.335966109296187E-5 0.0 0.0 5.83517627650733E-4 8.335966109296187E-5 12 8.335966109296187E-5 0.0 0.0 6.668772887436949E-4 1.6671932218592373E-4 13 8.335966109296187E-5 0.0 0.0 6.668772887436949E-4 1.6671932218592373E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGTAA 40 2.7585597E-4 16.626497 10 TCGCGTA 40 2.759438E-4 16.625803 9 GCGTAAC 45 6.758254E-4 14.778492 11 CGAACGA 80 1.2848432E-7 14.252473 16 TCGCCAG 130 1.8189894E-12 13.887605 17 ATCGCCA 145 0.0 13.761008 16 TCTATAC 120 5.2750693E-11 13.452807 3 GATTGCG 85 2.6943053E-7 13.412973 10 CGACCAT 110 2.739398E-9 12.955712 10 CGCCAGT 145 7.2759576E-12 12.451476 18 AACCGCG 85 3.93538E-6 12.295738 7 GCATCGC 155 1.8189894E-12 12.259169 14 TAGTACT 70 1.0917061E-4 12.212837 4 GGTCGCG 55 0.0030647132 12.092503 7 CGGAATT 55 0.0030656715 12.091998 15 CGACTTT 110 3.805326E-8 12.091998 13 ACGAACG 95 1.0379717E-6 12.0010805 15 CGTCGTA 120 9.988071E-9 11.87607 10 CTATACC 90 7.466313E-6 11.609734 4 CGTCTTA 140 6.7848305E-10 11.536754 15 >>END_MODULE