##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062397_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2178580 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.179723030597913 32.0 32.0 32.0 32.0 32.0 2 30.882187479918112 32.0 32.0 32.0 32.0 32.0 3 30.86802917496718 32.0 32.0 32.0 32.0 32.0 4 30.925299048003744 32.0 32.0 32.0 32.0 32.0 5 30.754021885815533 32.0 32.0 32.0 32.0 32.0 6 34.39235603007464 36.0 36.0 36.0 32.0 36.0 7 34.26693488419062 36.0 36.0 36.0 32.0 36.0 8 34.26977756153091 36.0 36.0 36.0 32.0 36.0 9 34.40961773265154 36.0 36.0 36.0 32.0 36.0 10 34.11155615125449 36.0 36.0 36.0 32.0 36.0 11 34.412735818744316 36.0 36.0 36.0 32.0 36.0 12 34.19611398250236 36.0 36.0 36.0 32.0 36.0 13 34.32261151759403 36.0 36.0 36.0 32.0 36.0 14 34.22668756713088 36.0 36.0 36.0 32.0 36.0 15 34.17972027651039 36.0 36.0 36.0 32.0 36.0 16 34.17913778699887 36.0 36.0 36.0 32.0 36.0 17 34.09448218564386 36.0 36.0 36.0 32.0 36.0 18 34.11015018957303 36.0 36.0 36.0 32.0 36.0 19 34.11350466817836 36.0 36.0 36.0 32.0 36.0 20 34.09789817220391 36.0 36.0 36.0 32.0 36.0 21 34.06343030781518 36.0 36.0 36.0 32.0 36.0 22 34.022958073607576 36.0 36.0 36.0 32.0 36.0 23 33.983276262519624 36.0 36.0 36.0 32.0 36.0 24 33.960717990617745 36.0 36.0 36.0 32.0 36.0 25 33.51220657492495 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 12.0 4 79.0 5 202.0 6 394.0 7 98.0 8 299.0 9 397.0 10 251.0 11 73.0 12 157.0 13 132.0 14 360.0 15 417.0 16 732.0 17 917.0 18 1239.0 19 1772.0 20 2738.0 21 3997.0 22 5992.0 23 8778.0 24 12284.0 25 17083.0 26 24021.0 27 31589.0 28 43172.0 29 57690.0 30 75294.0 31 104226.0 32 151018.0 33 219671.0 34 493611.0 35 919884.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.63732171145982 17.51034350109552 11.209908461220305 25.64242632622436 2 16.90958432253883 20.20283532459711 36.23103984547279 26.65654050739127 3 19.12257967378127 23.873375757467258 28.468145406171374 28.535899162580098 4 12.836213375128025 15.042554471054284 35.3542517974151 36.76698035640259 5 14.743614762992143 36.17637456567348 33.33400679677674 15.746003874557637 6 34.5076408670778 34.7134209877354 16.774409237465484 14.004528907721323 7 30.09795563656006 30.577444940719523 20.87393000255385 18.45066942016657 8 28.523997140594194 31.8776427911182 19.948398383590394 19.649961684697217 9 27.16282570171372 14.434689199551757 18.998177343092763 39.40430775564176 10 16.079480594918817 26.341251123606867 31.361728801283807 26.21753948019051 11 37.13497766770818 21.39037875511777 21.90205225466763 19.57259132250642 12 24.335715375663458 24.031081148160336 28.48633374453745 23.146869731638755 13 29.139144369642317 19.316045355550624 25.665555894102976 25.87925438070408 14 23.67380591174163 19.810589331253585 24.97128783537164 31.544316921633143 15 25.39277276965403 26.73143298817948 23.00656532166492 24.86922892050157 16 25.91450931844845 25.795584621952266 23.926104935880378 24.363801123718908 17 24.01391226339915 25.821743610294856 25.67858590519329 24.485758221112704 18 25.113431628488435 24.299325293230872 26.840873993455162 23.746369084825535 19 24.98127068842055 25.7940079072166 25.766476968232332 23.45824443613052 20 25.039259273897603 24.10250565393289 26.043846301263972 24.814388770905534 21 26.364396384007748 24.57253241252903 24.555067403444927 24.50800380001829 22 25.12507142505805 24.706151679931157 25.224687258229338 24.94408963678146 23 23.731910371417698 24.36696642145732 25.81836551208059 26.082757695044396 24 24.018175558874074 25.819598477525762 25.41916991968907 24.74305604391109 25 24.694246174917385 24.598463992057983 25.23947843751867 25.467811395505958 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 299.0 1 299.0 2 876.0 3 1453.0 4 1453.0 5 1453.0 6 4205.0 7 6957.0 8 6957.0 9 6957.0 10 7112.0 11 7267.0 12 7267.0 13 7267.0 14 7169.5 15 7072.0 16 7072.0 17 7072.0 18 11362.0 19 15652.0 20 15652.0 21 15652.0 22 24780.5 23 33909.0 24 33909.0 25 33909.0 26 49521.5 27 65134.0 28 65134.0 29 65134.0 30 78195.5 31 91257.0 32 91257.0 33 91257.0 34 112309.5 35 133362.0 36 133362.0 37 133362.0 38 150087.0 39 166812.0 40 166812.0 41 166812.0 42 193705.0 43 220598.0 44 220598.0 45 220598.0 46 266910.5 47 313223.0 48 313223.0 49 313223.0 50 303018.5 51 292814.0 52 292814.0 53 292814.0 54 265610.0 55 238406.0 56 238406.0 57 238406.0 58 219774.5 59 201143.0 60 201143.0 61 201143.0 62 178908.0 63 156673.0 64 156673.0 65 156673.0 66 130288.5 67 103904.0 68 103904.0 69 103904.0 70 79446.5 71 54989.0 72 54989.0 73 54989.0 74 43391.0 75 31793.0 76 31793.0 77 31793.0 78 26351.0 79 20909.0 80 20909.0 81 20909.0 82 14668.0 83 8427.0 84 8427.0 85 8427.0 86 6210.0 87 3993.0 88 3993.0 89 3993.0 90 2690.5 91 1388.0 92 1388.0 93 1388.0 94 812.0 95 236.0 96 236.0 97 236.0 98 573.0 99 910.0 100 910.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007298331940989084 2 0.0029376933598949774 3 0.004727850251080979 4 0.014367156588236375 5 0.035940842199965115 6 0.046498177712087696 7 0.06756694727758447 8 0.08739637745687558 9 0.09579634440782528 10 0.11714052272581221 11 0.11856346794701135 12 0.13109456618531337 13 0.12012411754445557 14 0.12269459923436367 15 0.11241267247473126 16 0.11076021995979031 17 0.12200607735313829 18 0.12944211367037245 19 0.13063555159782977 20 0.12214378172938337 21 0.12856998595415361 22 0.14794040154596114 23 0.13880601125503766 24 0.13361914641647313 25 0.12898309908288885 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2178580.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.844618075468134 #Duplication Level Percentage of deduplicated Percentage of total 1 78.94403704328636 37.77047301671644 2 12.66594060669767 12.119941817880262 3 3.660778384051596 5.25445630931634 4 1.5206795777017128 2.910253344412104 5 0.804532449800447 1.9246273895011563 6 0.4890085985309671 1.4037857779400427 7 0.31623667286727697 1.0591155984354135 8 0.23488872772630146 0.8990529174638011 9 0.17630157444405462 0.7591573345841556 >10 0.9701844875067376 8.466636341831794 >50 0.08877138087063681 2.9593066982850065 >100 0.10330003577974181 10.89790302060703 >500 0.016765171742058466 5.607256331719743 >1k 0.008286234309293265 6.916192380413379 >5k 2.890546852079046E-4 1.051841720893241 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 8838 0.4056770924179971 No Hit TCCATGTACTCTGCGTTGATACCAC 7801 0.3580772796959487 No Hit GTATCAACGCAGAGTACTTTTTTTT 6178 0.28357921214736204 No Hit TATCAACGCAGAGTACTTTTTTTTT 4483 0.20577623956889352 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 4480 0.2056385351926484 No Hit GAGTACATGGAAGCAGTGGTATCAA 4130 0.18957302463072276 No Hit CATGTACTCTGCGTTGATACCACTG 3767 0.17291079510506843 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 3359 0.15418299993573797 No Hit GCGCAAGACGGACCAGAGCGAAAGC 3044 0.13972404043000486 No Hit CCCATGTACTCTGCGTTGATACCAC 2847 0.13068145305657813 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 2783 0.12774375969668317 No Hit ACGCAGAGTACTTTTTTTTTTTTTT 2780 0.1276060553204381 No Hit GTACATGGGAAGCAGTGGTATCAAC 2637 0.12104214671942275 No Hit GAATAACGCCGCCGCATCGCCAGTC 2593 0.11902248253449495 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 2591 0.11893067961699824 No Hit GAACTACGACGGTATCTGATCGTCT 2510 0.11521266145838115 No Hit GAATAGGACCGCGGTTCTATTTTGT 2483 0.11397332207217545 No Hit GCTTCCATGTACTCTGCGTTGATAC 2470 0.1133766031084468 No Hit GTATCTGATCGTCTTCGAACCTCCG 2440 0.11199955934599601 No Hit GATTAAGAGGGACGGCCGGGGGCAT 2243 0.10295697197256928 No Hit GTCCTATTCCATTATTCCTAGCTGC 2196 0.10079960341139642 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.180291749671804E-5 2 0.0 0.0 0.0 0.0 9.180291749671804E-5 3 0.0 0.0 0.0 0.0 9.180291749671804E-5 4 0.0 0.0 0.0 0.0 9.180291749671804E-5 5 0.0 0.0 0.0 4.590145874835902E-5 1.3770437624507708E-4 6 0.0 0.0 0.0 4.590145874835902E-5 1.3770437624507708E-4 7 0.0 0.0 0.0 4.590145874835902E-5 1.3770437624507708E-4 8 0.0 0.0 0.0 4.590145874835902E-5 1.3770437624507708E-4 9 0.0 0.0 0.0 4.590145874835902E-5 1.3770437624507708E-4 10 0.0 0.0 0.0 4.590145874835902E-5 1.3770437624507708E-4 11 0.0 0.0 0.0 4.590145874835902E-5 1.3770437624507708E-4 12 0.0 0.0 0.0 4.590145874835902E-5 2.2950729374179513E-4 13 0.0 0.0 0.0 4.590145874835902E-5 2.7540875249015416E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGACGG 600 0.0 13.140078 5 GCGTTAT 270 0.0 13.0103655 1 CGTTATT 280 0.0 12.886263 2 CGGTCCA 545 0.0 12.725572 10 CAAGACG 635 0.0 12.414393 4 CGAACGA 185 0.0 12.327084 16 ACGGTAT 525 0.0 12.305254 9 CGCATCG 460 0.0 12.18611 13 GCGCGCT 180 0.0 12.14049 15 ATCGCCA 470 0.0 12.130375 16 AGGCCCG 535 0.0 11.897944 10 ATATACG 460 0.0 11.771938 6 TACGCTA 455 0.0 11.692775 9 GCGCAAG 660 0.0 11.651789 1 ACTCTAA 475 0.0 11.60073 10 ACGCTAT 470 0.0 11.522001 10 AACCGCG 215 0.0 11.4888315 7 CGCAAGA 620 0.0 11.486056 2 ATACGCT 485 0.0 11.361279 8 GTTATTC 335 0.0 11.338523 3 >>END_MODULE