##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062395_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2023382 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.249786248963368 32.0 32.0 32.0 32.0 32.0 2 31.43684089311855 32.0 32.0 32.0 32.0 32.0 3 31.511193635210752 32.0 32.0 32.0 32.0 32.0 4 31.609576441818696 32.0 32.0 32.0 32.0 32.0 5 31.55493821730153 32.0 32.0 32.0 32.0 32.0 6 35.14579451630982 36.0 36.0 36.0 36.0 36.0 7 35.15940094356874 36.0 36.0 36.0 36.0 36.0 8 35.104600614219166 36.0 36.0 36.0 36.0 36.0 9 35.21444591283307 36.0 36.0 36.0 36.0 36.0 10 35.10563650363599 36.0 36.0 36.0 36.0 36.0 11 35.227983149004984 36.0 36.0 36.0 36.0 36.0 12 35.14188521989421 36.0 36.0 36.0 36.0 36.0 13 35.180791862337415 36.0 36.0 36.0 36.0 36.0 14 35.14565218035942 36.0 36.0 36.0 36.0 36.0 15 35.11691366237319 36.0 36.0 36.0 36.0 36.0 16 35.12283543097645 36.0 36.0 36.0 36.0 36.0 17 35.103214321368874 36.0 36.0 36.0 36.0 36.0 18 35.109439542310845 36.0 36.0 36.0 36.0 36.0 19 35.09705680884776 36.0 36.0 36.0 36.0 36.0 20 35.07516820847472 36.0 36.0 36.0 36.0 36.0 21 35.06802917096228 36.0 36.0 36.0 36.0 36.0 22 35.05048577085296 36.0 36.0 36.0 36.0 36.0 23 35.018434976687544 36.0 36.0 36.0 36.0 36.0 24 34.99824748861065 36.0 36.0 36.0 36.0 36.0 25 34.97652346418027 36.0 36.0 36.0 36.0 36.0 26 34.93603135740063 36.0 36.0 36.0 32.0 36.0 27 34.91871628787841 36.0 36.0 36.0 32.0 36.0 28 34.90126431884834 36.0 36.0 36.0 32.0 36.0 29 34.875714521528806 36.0 36.0 36.0 32.0 36.0 30 34.8624293386024 36.0 36.0 36.0 32.0 36.0 31 34.85536542284156 36.0 36.0 36.0 32.0 36.0 32 34.81399112970264 36.0 36.0 36.0 32.0 36.0 33 34.78582195551804 36.0 36.0 36.0 32.0 36.0 34 34.771630369351904 36.0 36.0 36.0 32.0 36.0 35 34.73200166849364 36.0 36.0 36.0 32.0 36.0 36 34.70660903378601 36.0 36.0 36.0 32.0 36.0 37 34.69458807086353 36.0 36.0 36.0 32.0 36.0 38 34.65805122315015 36.0 36.0 36.0 32.0 36.0 39 34.636764091011976 36.0 36.0 36.0 32.0 36.0 40 34.618299955223485 36.0 36.0 36.0 32.0 36.0 41 34.592329574939384 36.0 36.0 36.0 32.0 36.0 42 34.55613868266101 36.0 36.0 36.0 32.0 36.0 43 34.54490205013191 36.0 36.0 36.0 32.0 36.0 44 34.509773735261064 36.0 36.0 36.0 32.0 36.0 45 34.454394177668874 36.0 36.0 36.0 32.0 36.0 46 34.45830446252858 36.0 36.0 36.0 32.0 36.0 47 34.41455049021885 36.0 36.0 36.0 32.0 36.0 48 34.37226238050946 36.0 36.0 36.0 32.0 36.0 49 34.35177144009386 36.0 36.0 36.0 32.0 36.0 50 33.840819479465566 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 7.0 20 19.0 21 62.0 22 203.0 23 581.0 24 1455.0 25 3538.0 26 6938.0 27 12927.0 28 21437.0 29 32578.0 30 45911.0 31 64600.0 32 93766.0 33 151359.0 34 329996.0 35 1258003.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.925295086189045 18.1761921215114 11.595642823000682 26.302869969298875 2 16.241261117440203 20.704547307966994 36.55629335461885 26.497898219973955 3 18.75351209495074 24.33792222362253 28.619008433970144 28.289557247456585 4 12.630314256653971 15.804313380890767 35.57610095592618 35.989271406529085 5 14.315537056275089 36.66969460042642 33.48665748731579 15.528110855982707 6 34.186283279874665 35.17300345463262 16.755017619120576 13.885695646372142 7 29.851125418297393 30.658832913820977 20.99243790467539 18.49760376320624 8 28.099071850072647 32.8665401456968 19.70064940841562 19.33373859581492 9 27.494264553109595 14.266312540093764 18.810486601146 39.42893630565064 10 15.87614202360207 27.029547559482094 31.931044162693944 25.163266254221895 11 36.91052900539789 21.33561532127893 22.371554160311792 19.382301513011384 12 24.514056169324427 23.969670581234784 28.957606620993957 22.558666628446826 13 29.67022539490813 19.738536766660967 25.36614440575235 25.225093432678552 14 23.31067489974706 19.699641491324922 25.58548015154825 31.404203457379776 15 25.058145224184063 27.300381242889383 22.8326633329742 24.808810199952358 16 25.3196875330511 25.97468001593372 24.356300490960184 24.349331960054997 17 23.706991561652718 26.070905049071307 25.818110470489508 24.403992918786468 18 24.4684394741082 24.87518422126914 27.02000907391684 23.63636723070582 19 25.124865200935858 25.384628310422848 26.031070751840236 23.45943573680106 20 25.37499098044759 24.468933696158217 25.985256367804006 24.170818955590196 21 26.05869776443598 24.49710435300897 25.13969186243626 24.30450602011879 22 25.277826925414974 24.83762334546813 25.467558770415078 24.416990958701817 23 24.14754109703457 24.60331267155683 26.02835253056516 25.22079370084344 24 24.376514172805727 25.34370672468175 25.78732043677368 24.492458665738848 25 24.618584132902242 24.756027285010937 25.951846957223108 24.673541624863716 26 23.929193795338698 25.283213945760117 26.41176999696548 24.37582226193571 27 24.79477429373198 25.276887903519945 25.617703429209115 24.310634373538957 28 24.036489402396583 25.043664518118675 26.226634417030496 24.69321166245425 29 24.140276032899376 25.31815544469606 26.12225472006769 24.419313802336877 30 24.28518193796327 25.247926491389165 26.28040577607194 24.186485794575617 31 24.39435558881121 25.014110039527882 25.704538243396453 24.88699612826446 32 24.149221452004614 25.248717246669187 25.66949790005051 24.932563401275686 33 23.865933372936993 25.000469510947514 26.15348955362853 24.980107562486964 34 24.298871888748643 25.13895052936124 26.416119151005596 24.14605843088453 35 24.9368137109058 24.99083218097225 26.01327875803976 24.05907535008219 36 23.96181245063957 25.40711541369845 25.98841938892409 24.642652746737888 37 24.72083867504999 25.16212954350686 25.666334878930424 24.45069690251272 38 24.099601558183277 25.13035106569101 26.034085506345317 24.735961869780397 39 24.382049459765877 24.958905436541396 25.74239565242747 24.916649451265258 40 24.69632526136933 24.995724979267386 26.186898964209426 24.121050795153856 41 23.830991874001054 25.10890182872043 26.56463287703459 24.49547342024393 42 24.67878037859386 25.253016978504306 26.103474282167184 23.964728360734654 43 23.936656548293897 24.679324022848874 26.247490587541055 25.136528841316174 44 23.570487431439048 24.9144254520402 26.467172288771966 25.04791482774879 45 23.679068015826967 25.121405646585764 26.323551361038106 24.875974976549166 46 23.56239383487341 24.790981036196346 26.567512495175155 25.079112633755084 47 23.839393648851278 24.805054112372257 26.69644189777313 24.65911034100333 48 23.963789338839625 25.698508734386287 25.86639596477581 24.471305961998276 49 23.301383525206806 25.352256766146976 26.31939989581799 25.026959812828224 50 23.039940060749775 25.968996462358568 25.97962223643385 25.01144124045781 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 197.0 1 171.5 2 146.0 3 469.5 4 793.0 5 864.5 6 936.0 7 779.0 8 622.0 9 843.5 10 1065.0 11 1571.5 12 2078.0 13 3355.5 14 4633.0 15 5998.0 16 7363.0 17 7845.0 18 8327.0 19 8833.5 20 9340.0 21 10634.0 22 11928.0 23 12566.5 24 13205.0 25 14931.0 26 16657.0 27 19851.0 28 23045.0 29 26567.0 30 30089.0 31 33465.5 32 36842.0 33 42536.5 34 48231.0 35 54805.0 36 61379.0 37 70372.5 38 79366.0 39 84693.0 40 90020.0 41 97350.5 42 104681.0 43 108438.0 44 112195.0 45 122378.0 46 132561.0 47 140224.0 48 147887.0 49 149412.5 50 150938.0 51 146057.5 52 141177.0 53 138397.0 54 135617.0 55 135211.5 56 134806.0 57 130771.0 58 126736.0 59 116483.5 60 106231.0 61 94213.5 62 82196.0 63 71539.0 64 60882.0 65 52037.5 66 43193.0 67 37548.0 68 31903.0 69 28272.5 70 24642.0 71 19593.5 72 14545.0 73 12738.0 74 10931.0 75 8148.5 76 5366.0 77 4643.0 78 3920.0 79 3397.0 80 2874.0 81 2250.5 82 1627.0 83 1374.0 84 1121.0 85 893.5 86 666.0 87 484.0 88 302.0 89 187.5 90 73.0 91 49.5 92 26.0 93 18.0 94 10.0 95 8.5 96 7.0 97 5.5 98 4.0 99 3.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01625990544543739 2 0.004793953885128957 3 8.401774850226008E-4 4 1.9768882000531783E-4 5 0.0 6 5.930664600159534E-4 7 4.942220500132946E-5 8 9.884441000265892E-5 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 4.942220500132946E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2023382.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.27940896883591 #Duplication Level Percentage of deduplicated Percentage of total 1 80.02935714548573 47.4409299174028 2 12.428334132899744 14.734886037310133 3 3.393338011595818 6.034652152766549 4 1.387403286595227 3.2897778732314213 5 0.7215309950007939 2.138596546817158 6 0.4414248334692378 1.570044193933394 7 0.3006252265008729 1.2474620023665923 8 0.2035113021768475 0.9651223769217352 9 0.16164497172129294 0.8623996547780196 >10 0.8000903189957415 8.637589620192504 >50 0.06357416665485063 2.6125422381723316 >100 0.06320747609248276 7.679789515461803 >500 0.004699372358209527 1.8316373046683796 >1k 0.001258760453091833 0.9545705659772254 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 4.942220500132946E-5 4 0.0 0.0 0.0 0.0 4.942220500132946E-5 5 0.0 0.0 0.0 0.0 9.884441000265892E-5 6 0.0 0.0 0.0 0.0 9.884441000265892E-5 7 0.0 0.0 0.0 0.0 9.884441000265892E-5 8 0.0 0.0 0.0 0.0 9.884441000265892E-5 9 0.0 0.0 0.0 4.942220500132946E-5 9.884441000265892E-5 10 4.942220500132946E-5 0.0 0.0 4.942220500132946E-5 9.884441000265892E-5 11 4.942220500132946E-5 0.0 0.0 4.942220500132946E-5 9.884441000265892E-5 12 4.942220500132946E-5 4.942220500132946E-5 0.0 4.942220500132946E-5 1.9768882000531783E-4 13 9.884441000265892E-5 4.942220500132946E-5 0.0 4.942220500132946E-5 2.965332300079767E-4 14 9.884441000265892E-5 4.942220500132946E-5 0.0 9.884441000265892E-5 2.965332300079767E-4 15 9.884441000265892E-5 4.942220500132946E-5 0.0 1.9768882000531783E-4 6.42488665017283E-4 16 9.884441000265892E-5 4.942220500132946E-5 0.0 3.459554350093062E-4 7.907552800212713E-4 17 9.884441000265892E-5 4.942220500132946E-5 0.0 3.9537764001063567E-4 7.907552800212713E-4 18 9.884441000265892E-5 4.942220500132946E-5 0.0 3.9537764001063567E-4 7.907552800212713E-4 19 9.884441000265892E-5 4.942220500132946E-5 0.0 5.43644255014624E-4 7.907552800212713E-4 20 9.884441000265892E-5 4.942220500132946E-5 0.0 7.907552800212713E-4 8.895996900239303E-4 21 9.884441000265892E-5 4.942220500132946E-5 0.0 0.001284977330034566 9.884441000265892E-4 22 9.884441000265892E-5 4.942220500132946E-5 0.0 0.0020757326100558373 9.884441000265892E-4 23 9.884441000265892E-5 4.942220500132946E-5 0.0 0.004398576245118322 0.0010378663050279186 24 9.884441000265892E-5 4.942220500132946E-5 0.0 0.008253508235222019 0.0010378663050279186 25 9.884441000265892E-5 4.942220500132946E-5 0.0 0.010329240845277856 0.0010378663050279186 26 9.884441000265892E-5 4.942220500132946E-5 0.0 0.013096884325352305 0.0010378663050279186 27 9.884441000265892E-5 4.942220500132946E-5 0.0 0.018039104825485253 0.0010378663050279186 28 9.884441000265892E-5 4.942220500132946E-5 0.0 0.03118541135583889 0.0010378663050279186 29 9.884441000265892E-5 4.942220500132946E-5 0.0 0.05530344739648766 0.0010378663050279186 30 9.884441000265892E-5 4.942220500132946E-5 0.0 0.1041820081428025 0.0010378663050279186 31 9.884441000265892E-5 4.942220500132946E-5 0.0 0.19778766441532047 0.0010378663050279186 32 9.884441000265892E-5 4.942220500132946E-5 0.0 0.31150815812337956 0.001087288510029248 33 9.884441000265892E-5 4.942220500132946E-5 0.0 0.4263159403414679 0.001087288510029248 34 9.884441000265892E-5 4.942220500132946E-5 0.0 0.5552584731899365 0.0011367107150305775 35 9.884441000265892E-5 4.942220500132946E-5 0.0 0.7030308661439115 0.0011367107150305775 36 9.884441000265892E-5 4.942220500132946E-5 0.0 0.9141131037045896 0.001186132920031907 37 9.884441000265892E-5 4.942220500132946E-5 0.0 1.2172194869777433 0.001186132920031907 38 9.884441000265892E-5 4.942220500132946E-5 0.0 1.6037505522931408 0.001186132920031907 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAACGG 205 0.0 18.243738 35 TCGCCGA 90 2.2164526E-4 17.110956 35 GTACTAA 170 2.4629117E-9 16.827538 1 CGCGAAC 95 3.3479364E-4 16.21038 12 TAGGACG 590 0.0 15.288377 4 ACCGTCG 350 0.0 15.08558 8 TAACGGC 235 5.0931703E-11 14.978589 36 ATAACGC 560 0.0 14.928806 3 GTCCTAA 505 0.0 14.815409 1 TGTAGGA 805 0.0 14.758361 2 GTATAGA 195 1.5126716E-8 14.67016 1 GTATAGT 210 2.5374902E-9 14.670159 1 CATCGTT 555 0.0 14.666533 28 GTATTAG 565 0.0 14.410511 1 CGAGCCG 535 0.0 14.392393 15 GTATTAT 245 1.0004442E-10 14.370768 1 TATATTG 185 1.2666169E-7 14.270495 5 TAACGCC 540 0.0 14.259483 4 TAATACT 525 0.0 14.247844 4 TACGCTA 405 0.0 14.123329 9 >>END_MODULE