##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062394_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1386271 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.18899551386417 32.0 32.0 32.0 32.0 32.0 2 31.375692054439572 32.0 32.0 32.0 32.0 32.0 3 31.492654755094783 32.0 32.0 32.0 32.0 32.0 4 31.604636467184267 32.0 32.0 32.0 32.0 32.0 5 31.53070287122792 32.0 32.0 32.0 32.0 32.0 6 35.13508037028835 36.0 36.0 36.0 36.0 36.0 7 35.14838007864263 36.0 36.0 36.0 36.0 36.0 8 35.09185144895911 36.0 36.0 36.0 36.0 36.0 9 35.20897284874314 36.0 36.0 36.0 36.0 36.0 10 35.10443268307568 36.0 36.0 36.0 36.0 36.0 11 35.22798861117343 36.0 36.0 36.0 36.0 36.0 12 35.14289702374211 36.0 36.0 36.0 36.0 36.0 13 35.177103178238596 36.0 36.0 36.0 36.0 36.0 14 35.13708863562752 36.0 36.0 36.0 36.0 36.0 15 35.099425725561595 36.0 36.0 36.0 36.0 36.0 16 35.10767591618089 36.0 36.0 36.0 36.0 36.0 17 35.08323192218549 36.0 36.0 36.0 36.0 36.0 18 35.088497847823405 36.0 36.0 36.0 36.0 36.0 19 35.073292307204 36.0 36.0 36.0 36.0 36.0 20 35.05938304992314 36.0 36.0 36.0 36.0 36.0 21 35.03544400770124 36.0 36.0 36.0 36.0 36.0 22 35.01584105849434 36.0 36.0 36.0 36.0 36.0 23 34.97214036793672 36.0 36.0 36.0 36.0 36.0 24 34.945351233633254 36.0 36.0 36.0 32.0 36.0 25 34.91789195619038 36.0 36.0 36.0 32.0 36.0 26 34.86129046917955 36.0 36.0 36.0 32.0 36.0 27 34.840179156889235 36.0 36.0 36.0 32.0 36.0 28 34.80687903014634 36.0 36.0 36.0 32.0 36.0 29 34.76558479546929 36.0 36.0 36.0 32.0 36.0 30 34.7517036712158 36.0 36.0 36.0 32.0 36.0 31 34.73968004812912 36.0 36.0 36.0 32.0 36.0 32 34.704512321183955 36.0 36.0 36.0 32.0 36.0 33 34.66493275845776 36.0 36.0 36.0 32.0 36.0 34 34.65010881710719 36.0 36.0 36.0 32.0 36.0 35 34.59019051830414 36.0 36.0 36.0 32.0 36.0 36 34.55212436817909 36.0 36.0 36.0 32.0 36.0 37 34.51359943329984 36.0 36.0 36.0 32.0 36.0 38 34.45563818329894 36.0 36.0 36.0 32.0 36.0 39 34.38344883504019 36.0 36.0 36.0 32.0 36.0 40 34.35336957925254 36.0 36.0 36.0 32.0 36.0 41 34.32065014704917 36.0 36.0 36.0 32.0 36.0 42 34.24005767991973 36.0 36.0 36.0 32.0 36.0 43 34.24898017775745 36.0 36.0 36.0 32.0 36.0 44 34.20902767207855 36.0 36.0 36.0 32.0 36.0 45 34.098138098539174 36.0 36.0 36.0 32.0 36.0 46 34.142357446704146 36.0 36.0 36.0 32.0 36.0 47 34.071870507281766 36.0 36.0 36.0 32.0 36.0 48 34.04175301943127 36.0 36.0 36.0 32.0 36.0 49 34.036289441242005 36.0 36.0 36.0 32.0 36.0 50 33.50744623525992 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 2.0 21 27.0 22 130.0 23 451.0 24 1096.0 25 2716.0 26 5679.0 27 10642.0 28 17773.0 29 25776.0 30 35025.0 31 49627.0 32 72323.0 33 110808.0 34 238192.0 35 816001.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.29160017199634 17.42148338186362 11.327228809964245 25.959687636175794 2 15.734067226223928 20.32729410661405 37.224889356990076 26.71374931017194 3 19.9750841648831 23.96998557997846 27.55637983159088 28.49855042354756 4 12.588276708799032 15.380597951619674 35.30678816331065 36.724337176270645 5 14.320288024491603 36.75176065863024 33.22892854283182 15.699022774046345 6 34.91679795479072 34.42302476296001 16.64545858508913 14.014718697160136 7 30.438442727607175 30.063191153238545 20.34279036551321 19.155575753641067 8 28.439893787001242 33.10716302945095 19.401617721210354 19.051325462337452 9 27.140003650079965 14.735791198113501 18.40830544677051 39.71589970503603 10 15.929352918729457 27.06058194970536 31.67641824722583 25.333646884339355 11 37.54287581576762 21.261932190747697 21.45374172870961 19.74145026477507 12 24.606588466468676 23.79578019016484 29.0013280231643 22.596303320202182 13 30.098804634880196 19.654454287797986 25.13996181121873 25.10677926610309 14 23.412161114241012 19.710503934656355 25.196155730012386 31.68117922109025 15 25.334801059821636 27.315438323386985 22.96325898760055 24.38650162919083 16 25.554094401455412 25.992681084722975 24.574632232802966 23.878592281018644 17 23.639100868444913 26.069145210424228 26.05421306512219 24.237540856008675 18 24.781301780099273 24.739246510963586 27.399043909884863 23.080407799052278 19 25.002903472697618 25.940815323987877 25.52927962858633 23.527001574728175 20 24.946276738098106 24.454309438774956 26.657918978323863 23.94149484480307 21 25.504104175879032 24.99460783641871 24.701086584080603 24.800201403621656 22 24.58602971569051 25.485709504130146 25.52689914165412 24.401361638525223 23 23.531690412624947 25.090620809351126 25.812124757713317 25.565564020310603 24 23.935579695456372 25.993041764561188 25.806209608366622 24.265168931615825 25 24.748912730627705 24.923193228452444 25.56873800288688 24.759156038032966 26 23.447868418224143 25.71077372317534 26.22892637875278 24.612431479847736 27 24.78786615315476 25.57436460836301 25.879716159394516 23.75805307908771 28 23.98809467990025 25.033849802816334 26.042743446266996 24.935312071016416 29 23.58932705077146 25.63192911054188 26.373775401779305 24.404968436907357 30 24.338098394902584 25.440408116450534 26.438409228787158 23.783084259859724 31 24.081510757997535 25.40946178633182 25.58965743350326 24.919370022167385 32 23.83422866091839 25.723181109609882 25.790411831452868 24.652178398018858 33 23.497570099929955 25.282502483280687 26.298104771722127 24.921822645067234 34 23.871522956189665 25.824964959953718 26.691750747148284 23.611761336708334 35 24.74393534886036 25.494293684279622 26.252082024366086 23.509688942493927 36 23.74160607846518 26.062436565433455 26.00754109405737 24.188416262044 37 24.66133966590948 25.64397581713821 25.804334073207908 23.890350443744403 38 24.07869745525947 25.650684462128975 25.545005269532435 24.725612813079117 39 24.316457604609777 25.266921114269863 25.968659807497957 24.4479614736224 40 24.960487523723714 25.471570854472176 25.625869689259893 23.942071932544216 41 23.607288906714487 25.547385756464646 26.61463739773825 24.230687939082618 42 25.112405871579224 25.967649903950957 25.883827909550156 23.036116314919667 43 24.238406487620388 24.800850627330444 25.9810671939325 24.97967569111667 44 23.535369346974726 25.586844130765197 26.49301615629267 24.384770365967405 45 24.03101558064765 25.825397775759573 25.762567347942788 24.381019295649985 46 23.713197899970133 25.16825775139836 26.26191510143075 24.856629247200754 47 24.29510535818754 25.031757859754695 26.661814320576564 24.011322461481196 48 24.18221256882673 26.53774045623114 25.117238981411283 24.162807993530848 49 23.46200706788211 25.59744811800867 26.51725384142062 24.4232909726886 50 23.344947232501607 26.93227149112366 24.883319988169692 24.83946128820504 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 31.0 1 30.0 2 29.0 3 152.0 4 275.0 5 294.0 6 313.0 7 298.0 8 283.0 9 378.0 10 473.0 11 731.0 12 989.0 13 1712.5 14 2436.0 15 3248.0 16 4060.0 17 4789.5 18 5519.0 19 5892.0 20 6265.0 21 7081.0 22 7897.0 23 8402.5 24 8908.0 25 9388.0 26 9868.0 27 12265.5 28 14663.0 29 17061.5 30 19460.0 31 22282.5 32 25105.0 33 29072.5 34 33040.0 35 38398.5 36 43757.0 37 49359.0 38 54961.0 39 58490.5 40 62020.0 41 66424.0 42 70828.0 43 74436.0 44 78044.0 45 86848.0 46 95652.0 47 103681.0 48 111710.0 49 112037.5 50 112365.0 51 104995.5 52 97626.0 53 94819.5 54 92013.0 55 92002.0 56 91991.0 57 88412.5 58 84834.0 59 77272.5 60 69711.0 61 61635.5 62 53560.0 63 46308.0 64 39056.0 65 33180.5 66 27305.0 67 23618.0 68 19931.0 69 17947.0 70 15963.0 71 12429.5 72 8896.0 73 7850.5 74 6805.0 75 4953.5 76 3102.0 77 2747.0 78 2392.0 79 2103.5 80 1815.0 81 1389.5 82 964.0 83 814.5 84 665.0 85 543.0 86 421.0 87 307.0 88 193.0 89 122.0 90 51.0 91 32.0 92 13.0 93 8.5 94 4.0 95 4.5 96 5.0 97 4.0 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01406651369032462 2 0.00403961418799066 3 2.885438705707614E-4 4 3.6067983821345175E-4 5 0.0 6 5.049517734988325E-4 7 7.213596764269035E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 3.6067983821345175E-4 47 0.0 48 0.0 49 0.0 50 7.213596764269035E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1386271.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.067900124868444 #Duplication Level Percentage of deduplicated Percentage of total 1 76.8588088638505 43.861708279585734 2 14.10253964548223 16.09604647990755 3 4.364923073503681 7.472909820343254 4 1.7430619148820339 3.978915330797994 5 0.8853904309084566 2.5263686341299016 6 0.47410635837525916 1.6233752584994623 7 0.2931906195090516 1.1712241094183602 8 0.21494791860569487 0.9813301080830515 9 0.14355164098051673 0.737297163921339 >10 0.7741320591339709 8.13263251567249 >50 0.07257385516666497 2.893071070685376 >100 0.06616942479537015 7.496612493283515 >500 0.005461161090066073 2.067662970234649 >1k 0.0011430337165254571 0.9608457654374909 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2565 0.18502875700350077 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2495 0.17997923926851245 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.442719352853807E-4 2 0.0 0.0 0.0 0.0 1.442719352853807E-4 3 0.0 0.0 0.0 0.0 1.442719352853807E-4 4 0.0 0.0 0.0 0.0 1.442719352853807E-4 5 0.0 0.0 0.0 0.0 1.442719352853807E-4 6 0.0 0.0 0.0 0.0 1.442719352853807E-4 7 0.0 0.0 0.0 0.0 1.442719352853807E-4 8 0.0 0.0 0.0 0.0 1.442719352853807E-4 9 0.0 0.0 0.0 0.0 1.442719352853807E-4 10 0.0 0.0 0.0 0.0 1.442719352853807E-4 11 0.0 0.0 0.0 0.0 1.442719352853807E-4 12 0.0 0.0 0.0 7.213596764269035E-5 2.885438705707614E-4 13 0.0 0.0 0.0 7.213596764269035E-5 3.6067983821345175E-4 14 0.0 0.0 0.0 7.213596764269035E-5 3.6067983821345175E-4 15 0.0 0.0 0.0 2.1640790292807107E-4 3.6067983821345175E-4 16 0.0 0.0 0.0 3.6067983821345175E-4 3.6067983821345175E-4 17 0.0 0.0 0.0 3.6067983821345175E-4 4.3281580585614215E-4 18 0.0 0.0 0.0 7.213596764269035E-4 4.3281580585614215E-4 19 0.0 0.0 0.0 0.0011541754822830457 5.049517734988325E-4 20 0.0 0.0 0.0 0.0015869912881391877 5.770877411415228E-4 21 0.0 0.0 0.0 0.0023804869322087818 5.770877411415228E-4 22 0.0 0.0 0.0 0.004256022090918731 5.770877411415228E-4 23 0.0 0.0 0.0 0.006997188861340964 5.770877411415228E-4 24 0.0 0.0 0.0 0.011469618855187767 5.770877411415228E-4 25 0.0 0.0 0.0 0.015004281269679594 5.770877411415228E-4 26 0.0 0.0 0.0 0.020198070939953298 5.770877411415228E-4 27 7.213596764269035E-5 0.0 0.0 0.025680404480797767 5.770877411415228E-4 28 7.213596764269035E-5 0.0 0.0 0.036284391724273245 5.770877411415228E-4 29 7.213596764269035E-5 0.0 0.0 0.05208216863802244 5.770877411415228E-4 30 7.213596764269035E-5 0.0 0.0 0.08093655569509858 5.770877411415228E-4 31 7.213596764269035E-5 0.0 0.0 0.1301332856274134 6.492237087842132E-4 32 7.213596764269035E-5 0.0 0.0 0.18827487554742184 6.492237087842132E-4 33 7.213596764269035E-5 0.0 0.0 0.24158335563537 7.213596764269035E-4 34 7.213596764269035E-5 0.0 0.0 0.31011252489592583 7.213596764269035E-4 35 7.213596764269035E-5 0.0 0.0 0.3919147122027367 7.213596764269035E-4 36 7.213596764269035E-5 0.0 0.0 0.49910876011977456 7.213596764269035E-4 37 7.213596764269035E-5 0.0 0.0 0.6490073008812851 7.213596764269035E-4 38 1.442719352853807E-4 0.0 0.0 0.8294193559556537 7.213596764269035E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 625 0.0 21.120537 4 GTAGGAC 795 0.0 21.03198 3 CGTCTTA 105 7.749077E-8 20.952158 15 AACGAAT 285 0.0 20.841883 31 GTATCGT 65 4.9330207E-4 20.307476 10 CGCGTAA 225 0.0 19.55535 10 TCGCGTA 220 0.0 18.999796 9 TGTAGGA 875 0.0 18.60753 2 GGACGTG 650 0.0 18.277388 6 AGGACGT 690 0.0 18.174374 5 GCGTAAC 230 0.0 18.17372 11 GATATAC 505 0.0 17.865063 1 GTCCTAC 745 0.0 17.721767 1 GTATTAG 300 0.0 17.603622 1 GTCGCGT 250 0.0 17.599812 8 GACGTGA 355 0.0 17.351929 7 ACTGTTC 615 0.0 17.17055 8 CCAACGA 360 0.0 17.11093 29 CGCAATA 245 0.0 17.06104 36 CAACGAA 375 0.0 17.013151 30 >>END_MODULE