##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062390_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2793410 Sequences flagged as poor quality 0 Sequence length 25 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.325805019671296 32.0 32.0 32.0 32.0 32.0 2 31.055051710991226 32.0 32.0 32.0 32.0 32.0 3 31.039161812981266 32.0 32.0 32.0 32.0 32.0 4 31.10420167465571 32.0 32.0 32.0 32.0 32.0 5 30.983115260559675 32.0 32.0 32.0 32.0 32.0 6 34.66922363706008 36.0 36.0 36.0 32.0 36.0 7 34.556712763253515 36.0 36.0 36.0 32.0 36.0 8 34.576805051889984 36.0 36.0 36.0 32.0 36.0 9 34.68117462169893 36.0 36.0 36.0 32.0 36.0 10 34.42166921432944 36.0 36.0 36.0 32.0 36.0 11 34.670489473439275 36.0 36.0 36.0 32.0 36.0 12 34.497995997723216 36.0 36.0 36.0 32.0 36.0 13 34.57344249501505 36.0 36.0 36.0 32.0 36.0 14 34.511348853193766 36.0 36.0 36.0 32.0 36.0 15 34.47156665151195 36.0 36.0 36.0 32.0 36.0 16 34.49039560966704 36.0 36.0 36.0 32.0 36.0 17 34.445788838731154 36.0 36.0 36.0 32.0 36.0 18 34.46527219419992 36.0 36.0 36.0 32.0 36.0 19 34.40616701450915 36.0 36.0 36.0 32.0 36.0 20 34.39058462595895 36.0 36.0 36.0 32.0 36.0 21 34.35989238958835 36.0 36.0 36.0 32.0 36.0 22 34.314156174711194 36.0 36.0 36.0 32.0 36.0 23 34.305837667939905 36.0 36.0 36.0 32.0 36.0 24 34.27094876870921 36.0 36.0 36.0 32.0 36.0 25 33.864689035981115 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 8.0 4 104.0 5 270.0 6 497.0 7 111.0 8 429.0 9 495.0 10 325.0 11 84.0 12 222.0 13 154.0 14 380.0 15 486.0 16 761.0 17 1027.0 18 1223.0 19 1660.0 20 2480.0 21 3486.0 22 5283.0 23 8097.0 24 11594.0 25 16957.0 26 24391.0 27 32513.0 28 44912.0 29 62031.0 30 81962.0 31 113210.0 32 165529.0 33 248965.0 34 597325.0 35 1366438.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.41161971011587 20.58746556350546 12.542205403508897 24.45870932286977 2 12.234149952887334 21.700967742859355 46.15616488574104 19.90871741851227 3 18.49356974365969 27.613782941124033 29.881512015090507 24.011135300125765 4 10.377561155154105 17.579014227824207 40.72327100320876 31.320153613812927 5 10.721518348175389 40.93083985370306 36.362086704533695 11.985555093587852 6 28.589612542253175 39.96167039982121 19.760767709442863 11.687949348482753 7 26.369452398155975 32.892936733991306 23.140004707148382 17.597606160704338 8 23.099634275288555 41.28747854184515 20.971752092606785 14.64113509025951 9 27.002596155396652 15.212825616833264 21.60685714695243 36.177721080817655 10 14.272145694514485 30.8284741136113 35.297450912293186 19.601929279581025 11 33.15205684241992 22.607542788981764 27.17928738375121 17.06111298484711 12 23.823077320149352 25.626494812248712 33.89757417423274 16.6528536933692 13 29.09721473018449 23.9814422872553 26.928432590836053 19.992910391724156 14 18.982701159683973 25.165973809795194 28.750620990444816 27.100704040076018 15 20.30122669021583 37.03814541728505 23.636195514930698 19.024432377568417 16 18.63757239520615 29.70160272951431 32.69690062503584 18.963924250243707 17 18.505542038776348 31.90765562655648 30.287732961331177 19.29906937333599 18 18.483623657409463 28.91435666775159 35.22670082974999 17.375318845088962 19 22.684855100127795 27.207552107137545 28.811568331191516 21.29602446154315 20 23.27675596822205 29.027969684424825 30.173674768860764 17.52159957849236 21 21.660021414404575 27.94178321697122 27.527367530185025 22.87082783843918 22 22.02959407903299 31.95025418238388 28.326375989149337 17.693775749433787 23 19.2759366355829 31.412442300494863 30.09286411811352 19.21875694580871 24 21.85067314020731 28.35007162286368 31.510152666392315 18.28910257053669 25 20.11140942965398 30.185574844697122 30.98035279652724 18.722662929121665 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 285.0 1 285.0 2 838.0 3 1391.0 4 1391.0 5 1391.0 6 2973.5 7 4556.0 8 4556.0 9 4556.0 10 6396.0 11 8236.0 12 8236.0 13 8236.0 14 12546.5 15 16857.0 16 16857.0 17 16857.0 18 28983.0 19 41109.0 20 41109.0 21 41109.0 22 68464.5 23 95820.0 24 95820.0 25 95820.0 26 144644.5 27 193469.0 28 193469.0 29 193469.0 30 258191.0 31 322913.0 32 322913.0 33 322913.0 34 350234.0 35 377555.0 36 377555.0 37 377555.0 38 382224.0 39 386893.0 40 386893.0 41 386893.0 42 383180.0 43 379467.0 44 379467.0 45 379467.0 46 366356.0 47 353245.0 48 353245.0 49 353245.0 50 309557.5 51 265870.0 52 265870.0 53 265870.0 54 205635.0 55 145400.0 56 145400.0 57 145400.0 58 116639.5 59 87879.0 60 87879.0 61 87879.0 62 69696.0 63 51513.0 64 51513.0 65 51513.0 66 40136.0 67 28759.0 68 28759.0 69 28759.0 70 21153.0 71 13547.0 72 13547.0 73 13547.0 74 10796.0 75 8045.0 76 8045.0 77 8045.0 78 6769.0 79 5493.0 80 5493.0 81 5493.0 82 3902.5 83 2312.0 84 2312.0 85 2312.0 86 1742.5 87 1173.0 88 1173.0 89 1173.0 90 810.5 91 448.0 92 448.0 93 448.0 94 297.5 95 147.0 96 147.0 97 147.0 98 587.5 99 1028.0 100 1028.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008054671530494986 2 0.0037946452543665267 3 0.0046896087577548585 4 0.015464969338550376 5 0.036049129916482 6 0.046967684657819656 7 0.06841101019900409 8 0.08996173136059511 9 0.09826699267203884 10 0.12003250507444307 11 0.121034864198238 12 0.13467410798987617 13 0.12210882040230399 14 0.12572447295599284 15 0.1152355006962816 16 0.11348137222964047 17 0.1239345459492162 18 0.13080786565523858 19 0.13334956200486142 20 0.12260999996420147 21 0.13241879996133757 22 0.1528955649188626 23 0.14169062185644068 24 0.13596285543475536 25 0.13245459850147312 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2793410.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.33845283026595 #Duplication Level Percentage of deduplicated Percentage of total 1 82.94793938589382 47.56106509845833 2 11.783305169349129 13.512729752747079 3 2.5840262617927023 4.4449220377190795 4 0.8688564865975742 1.9927554669218246 5 0.4153681224218642 1.19082827473411 6 0.2379571616799814 0.8186457294366949 7 0.17279617429065203 0.6935505702170477 8 0.11745904337166845 0.538793585428366 9 0.09396228853220366 0.4848887023944839 >10 0.6244977895001512 7.050804906359201 >50 0.07749879096385921 3.108125464248101 >100 0.0633872718931553 7.2219303022127574 >500 0.007567499996582985 2.981598538848682 >1k 0.004878223138280493 5.444120297966475 >5k 2.5016528914258943E-4 1.0157767780535412 >10k+ 2.5016528914258943E-4 1.939464494254315 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCCTACAGTGGACATTTCTAAATT 15340 0.5491496056790804 No Hit GTCCTAAAGTGTGTATTTCTCATTT 13757 0.49248051664453124 No Hit CTGTAGGACGTGGAATATGGCAAGA 13548 0.4849986217562048 No Hit CTTTAGGACGTGAAATATGGCGAGG 11439 0.4094995006103651 No Hit GTCCTACAGTGTGCATTTCTCATTT 9627 0.3446325458847788 No Hit CTGTAGGACCTGGAATATGGCGAGA 7335 0.26258229189413657 No Hit CTGAAGGACCTGGAATATGGCGAGA 5745 0.20566261307863867 No Hit GTATCAACGCAGAGTACTTTTTTTT 5619 0.20115199702156147 No Hit GTCCTTCAGTGTGCATTTCTCATTT 4752 0.17011466272405412 No Hit ATTTAGAAATGTCCACTGTAGGACG 4621 0.16542505396629925 No Hit GATATACACTGTTCTACAAATCCCG 4122 0.14756158243866815 No Hit TTGTAGAACAGTGTATATCAATGAG 4000 0.14319416054213308 No Hit GAATATGGCAAGAAAACTGAAAATC 3916 0.1401870831707483 No Hit TTTCTAAATTTTCCACCTTTTTCAG 3841 0.1375021926605833 No Hit TATCAACGCAGAGTACTTTTTTTTT 3576 0.12801557952466697 No Hit GGAATATGGCGAGAAAACTGAAAAT 3293 0.11788459266631106 No Hit GTGTATATCAATGAGTTACAATGAA 3205 0.11473432113438414 No Hit CTGTAGGACATGGAATATGGCAAGA 3142 0.11247901310584554 No Hit ACCTGGAATATGGCGAGAAAACTGA 2996 0.10725242624605767 No Hit GTGTATATCAATGAGTTACAATGAG 2908 0.10410215471413076 No Hit ATTCCAGGTCCTTCAGTGTGCATTT 2884 0.10324298975087796 No Hit GACCTGGAATATGGCGAGAAAACTG 2833 0.10141726420396575 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 7.159708027106654E-5 0.0 6 0.0 0.0 0.0 1.4319416054213308E-4 0.0 7 0.0 0.0 0.0 1.4319416054213308E-4 0.0 8 0.0 0.0 0.0 1.4319416054213308E-4 0.0 9 0.0 0.0 0.0 1.7899270067766636E-4 0.0 10 0.0 0.0 0.0 2.1479124081319963E-4 0.0 11 0.0 0.0 0.0 2.5058978094873294E-4 0.0 12 0.0 0.0 0.0 2.5058978094873294E-4 0.0 13 0.0 0.0 0.0 2.8638832108426616E-4 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGA 45 6.754073E-4 14.780847 16 ACGAACG 45 6.7568285E-4 14.780051 15 AACCGCG 45 6.762342E-4 14.7784605 7 GCGGTCG 105 8.913048E-11 14.477638 9 TCGGCGT 105 8.913048E-11 14.477638 13 CGGTCGG 105 8.913048E-11 14.477638 10 GCATCGC 100 6.5847416E-10 14.251936 14 CGCATCG 95 4.9003575E-9 14.0014 13 TCGCGTA 95 4.9003575E-9 14.0014 9 TAGGACC 2615 0.0 13.947931 4 TCGCGAG 55 1.9566872E-4 13.8217945 18 CCAACGA 435 0.0 13.324844 19 TATACCG 50 0.0015009646 13.298946 5 GGTATCA 2120 0.0 13.031353 1 TCCAACG 645 0.0 12.669978 18 GTCGGCG 120 7.403287E-10 12.668161 12 CGCGTAA 105 1.9930667E-8 12.667933 10 GGTCGGC 120 7.403287E-10 12.66748 11 GTCGCGT 105 1.9947038E-8 12.667252 8 GGTCGCG 105 1.9947038E-8 12.667252 7 >>END_MODULE