##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062390_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2793410 Sequences flagged as poor quality 0 Sequence length 50 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.33630723739086 32.0 32.0 32.0 32.0 32.0 2 31.528840377889388 32.0 32.0 32.0 32.0 32.0 3 31.59526743299408 32.0 32.0 32.0 32.0 32.0 4 31.673953340182788 32.0 32.0 32.0 32.0 32.0 5 31.652407988802217 32.0 32.0 32.0 32.0 32.0 6 35.27031513454882 36.0 36.0 36.0 36.0 36.0 7 35.28140946012222 36.0 36.0 36.0 36.0 36.0 8 35.23494796682191 36.0 36.0 36.0 36.0 36.0 9 35.34393017852732 36.0 36.0 36.0 36.0 36.0 10 35.2668516257907 36.0 36.0 36.0 36.0 36.0 11 35.352912390232724 36.0 36.0 36.0 36.0 36.0 12 35.2949545537533 36.0 36.0 36.0 36.0 36.0 13 35.31863528805295 36.0 36.0 36.0 36.0 36.0 14 35.29812881030711 36.0 36.0 36.0 36.0 36.0 15 35.2629417092371 36.0 36.0 36.0 36.0 36.0 16 35.291342481053626 36.0 36.0 36.0 36.0 36.0 17 35.28275512724591 36.0 36.0 36.0 36.0 36.0 18 35.288679785638344 36.0 36.0 36.0 36.0 36.0 19 35.257321338435816 36.0 36.0 36.0 36.0 36.0 20 35.250885118904854 36.0 36.0 36.0 36.0 36.0 21 35.22540550796339 36.0 36.0 36.0 36.0 36.0 22 35.20905631468349 36.0 36.0 36.0 36.0 36.0 23 35.19201406166656 36.0 36.0 36.0 36.0 36.0 24 35.17919030861921 36.0 36.0 36.0 36.0 36.0 25 35.14634192617625 36.0 36.0 36.0 36.0 36.0 26 35.119171550184184 36.0 36.0 36.0 36.0 36.0 27 35.08560182715749 36.0 36.0 36.0 36.0 36.0 28 35.05083106310925 36.0 36.0 36.0 36.0 36.0 29 35.02354290992013 36.0 36.0 36.0 36.0 36.0 30 34.990421026630536 36.0 36.0 36.0 36.0 36.0 31 34.97901847562657 36.0 36.0 36.0 36.0 36.0 32 34.957830035691146 36.0 36.0 36.0 36.0 36.0 33 34.9715541220229 36.0 36.0 36.0 36.0 36.0 34 34.94942095861331 36.0 36.0 36.0 36.0 36.0 35 34.93904152988641 36.0 36.0 36.0 36.0 36.0 36 34.88582664198954 36.0 36.0 36.0 36.0 36.0 37 34.84692508439506 36.0 36.0 36.0 36.0 36.0 38 34.813530058244226 36.0 36.0 36.0 36.0 36.0 39 34.70932551970531 36.0 36.0 36.0 36.0 36.0 40 34.758770463340504 36.0 36.0 36.0 36.0 36.0 41 34.72688398767098 36.0 36.0 36.0 36.0 36.0 42 34.72981266623947 36.0 36.0 36.0 36.0 36.0 43 34.70959579868333 36.0 36.0 36.0 36.0 36.0 44 34.655072116159104 36.0 36.0 36.0 32.0 36.0 45 34.63163839178638 36.0 36.0 36.0 32.0 36.0 46 34.54609455826392 36.0 36.0 36.0 32.0 36.0 47 34.54397134684847 36.0 36.0 36.0 32.0 36.0 48 34.49724458636577 36.0 36.0 36.0 32.0 36.0 49 34.446115321417196 36.0 36.0 36.0 32.0 36.0 50 34.018046760053124 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 6.0 20 23.0 21 56.0 22 201.0 23 635.0 24 1609.0 25 3660.0 26 7413.0 27 14133.0 28 24124.0 29 37200.0 30 53769.0 31 77382.0 32 113582.0 33 186640.0 34 412267.0 35 1860710.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.88176101574699 21.27323549514694 12.915886585613427 24.929116903492652 2 11.916433636907476 22.238252776219472 45.6255502050101 20.21976338186295 3 18.079716759922533 27.942750564726015 30.242107260353908 23.73542541499755 4 10.272571060356555 18.12121429082838 40.84134030214076 30.764874346674304 5 10.576682469341224 41.14163017302515 36.18732523593931 12.094362121694317 6 28.788051272247962 40.09344161706765 19.45788683476277 11.660620275921618 7 26.298189774572933 33.04396169698028 23.178668071879198 17.479180456567583 8 23.09890889590461 41.501298234522764 20.760976999787715 14.63881586978491 9 26.79463451480449 15.153092456889608 21.58397800537694 36.46829502292896 10 14.207975198771393 31.076211512094538 35.16182730068268 19.55398598845139 11 33.13545093631082 22.6058115350056 27.24966975846725 17.00906777021633 12 23.884070007625088 25.72218184942418 33.733823534676254 16.659924608274473 13 29.079082555013407 23.879129809086386 27.01615588116317 20.02563175473704 14 19.005086972553258 25.193473210162487 28.665716812068403 27.135723005215844 15 20.351541664130938 37.060546070931224 23.56027221209919 19.027640052838645 16 18.76086933174865 29.86657884091487 32.380101739451064 18.992450087885416 17 18.60099305150336 32.12732824755407 30.03629971969743 19.235378981245145 18 18.62590883543769 29.007915057223965 35.028585134298226 17.337590973040122 19 22.91729463272488 27.22242706942411 28.81553370253561 21.044744595315404 20 23.46411733329515 29.11727959733802 29.985251001464157 17.43335206790267 21 21.730680422852355 27.946703133446217 27.537991200718835 22.784625242982592 22 22.19205200811911 31.781371155684273 28.32638245012368 17.700194386072937 23 19.307334046917568 31.441177628776302 29.932161766443166 19.319326557862972 24 22.03088698042894 28.34714560340229 31.23963184781325 18.382335568355522 25 20.21994623059272 30.217690922564177 30.71894208154192 18.843420765301193 26 17.511070698536912 31.702399576145286 31.779402235976818 19.007127489340984 27 18.96599496672526 30.952670750086813 30.46459345387895 19.61674082930898 28 18.044254155315546 31.77553599364218 28.897977740467745 21.28223211057453 29 20.036013331376346 29.296057506774876 28.48271467489556 22.18521448695322 30 18.54657927049735 29.851794043838893 30.52190691663594 21.079719769027818 31 21.793148875388862 28.31890055523536 29.61409173733895 20.27385883203683 32 19.376353632298876 30.875703888795414 29.9403596321342 19.80758284677151 33 18.446737142059348 31.040806755900498 31.757278738173056 18.7551773638671 34 19.602135024933684 30.90402053404262 31.584335990778296 17.909508450245397 35 18.83765720033937 31.444506893008906 30.939532685857067 18.778303220794655 36 17.92440064294178 30.50858985970552 32.30914903290244 19.25786046445026 37 18.681396572647767 29.930729824837744 29.169652861556305 22.218220740958184 38 19.399909071708056 31.851214107488694 29.010671544814404 19.738205275988847 39 21.41053407842028 28.386273407770428 30.0878496174926 20.115342896316687 40 22.696274445928093 28.21683891730895 30.666855205644715 18.42003143111824 41 21.720263047672915 27.306124056260984 32.091350714717855 18.882262181348246 42 20.062468452536507 30.95327932526912 30.939174700455712 18.045077521738666 43 18.077761588882403 30.98642877343462 31.74482084620589 19.190988791477086 44 17.724000415263067 30.889378931127187 30.796302726774805 20.590317926834945 45 18.048693174292353 31.207592154391943 30.288607830572666 20.455106840743035 46 18.6968391298371 28.280258379728274 30.982835303686397 22.04006718674823 47 21.24690655754313 28.39365807155343 30.323056881394738 20.036378489508696 48 18.32663303990463 29.47250851110292 30.187405357609514 22.013453091382935 49 20.630949269888774 28.604107524495152 29.891458826309066 20.873484379307012 50 18.376090558948267 31.78237184914336 29.04335100470501 20.798186587203368 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 22.0 1 29.5 2 37.0 3 124.5 4 212.0 5 264.0 6 316.0 7 334.5 8 353.0 9 545.5 10 738.0 11 1180.0 12 1622.0 13 2712.0 14 3802.0 15 5403.0 16 7004.0 17 8210.5 18 9417.0 19 11058.5 20 12700.0 21 15734.0 22 18768.0 23 23618.0 24 28468.0 25 36768.0 26 45068.0 27 61630.0 28 78192.0 29 98276.0 30 118360.0 31 143255.0 32 168150.0 33 203876.5 34 239603.0 35 275246.0 36 310889.0 37 311300.0 38 311711.0 39 288615.0 40 265519.0 41 241160.0 42 216801.0 43 198028.5 44 179256.0 45 166815.5 46 154375.0 47 144414.0 48 134453.0 49 124731.5 50 115010.0 51 101668.0 52 88326.0 53 78670.0 54 69014.0 55 63673.5 56 58333.0 57 51903.0 58 45473.0 59 39283.5 60 33094.0 61 27966.0 62 22838.0 63 19388.0 64 15938.0 65 13500.5 66 11063.0 67 9784.5 68 8506.0 69 8102.5 70 7699.0 71 5816.5 72 3934.0 73 3527.5 74 3121.0 75 2225.5 76 1330.0 77 1314.5 78 1299.0 79 1113.0 80 927.0 81 759.5 82 592.0 83 543.5 84 495.0 85 418.0 86 341.0 87 252.0 88 163.0 89 107.5 90 52.0 91 33.5 92 15.0 93 10.0 94 5.0 95 2.5 96 0.0 97 1.5 98 3.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015429170798414842 2 0.004761205838025926 3 7.159708027106655E-4 4 3.5798540135533277E-4 5 3.579854013553328E-5 6 2.863883210842662E-4 7 3.579854013553328E-5 8 3.579854013553328E-5 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 7.159708027106655E-5 47 3.579854013553328E-5 48 0.0 49 0.0 50 1.0739562040659982E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2793410.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 68.63501403473121 #Duplication Level Percentage of deduplicated Percentage of total 1 84.2693850955277 57.83830428729713 2 11.1651931120989 15.326463718987846 3 2.377235699254089 4.894848167465054 4 0.8383600218943854 2.3016340747551483 5 0.3380211672023314 1.160004377748412 6 0.19601884905404895 0.8072253873537905 7 0.12772222006058853 0.6136351456483865 8 0.09459256863675101 0.5193889820771745 9 0.06883531003509748 0.425206122330959 >10 0.440340231465581 5.764140687444529 >50 0.04666315882043008 2.2235922539600383 >100 0.03369638572545754 4.59424421377429 >500 0.0023617081348393815 1.1567881779147 >1k 0.0013645424778494322 1.509436750507818 >5k 2.0992961197683572E-4 0.8650876527347213 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 7718 0.2762931327660458 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 6021 0.21554301015604582 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 5150 0.18436248169799635 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 5127 0.1835391152748791 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 3055 0.10936454011405414 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 3.579854013553327E-5 0.0 6 0.0 0.0 0.0 3.579854013553327E-5 0.0 7 0.0 0.0 0.0 3.579854013553327E-5 0.0 8 0.0 0.0 0.0 3.579854013553327E-5 0.0 9 0.0 0.0 0.0 7.159708027106654E-5 0.0 10 0.0 0.0 0.0 7.159708027106654E-5 0.0 11 0.0 0.0 0.0 1.4319416054213308E-4 0.0 12 0.0 0.0 0.0 1.4319416054213308E-4 0.0 13 0.0 0.0 0.0 1.7899270067766636E-4 0.0 14 0.0 0.0 0.0 2.1479124081319963E-4 0.0 15 0.0 0.0 0.0 2.1479124081319963E-4 0.0 16 0.0 0.0 0.0 3.2218686121979944E-4 0.0 17 0.0 0.0 0.0 3.2218686121979944E-4 0.0 18 0.0 0.0 0.0 4.6538102176193254E-4 0.0 19 0.0 0.0 0.0 5.36978102032999E-4 0.0 20 0.0 0.0 0.0 0.001181351824472598 0.0 21 0.0 0.0 0.0 0.0015035386856923974 0.0 22 0.0 0.0 0.0 0.002398502189080729 0.0 23 0.0 0.0 0.0 0.003293465692469061 0.0 24 0.0 0.0 0.0 0.004295824816263992 0.0 25 0.0 0.0 0.0 0.004797004378161458 0.0 26 0.0 0.0 0.0 0.005835162042091923 0.0 27 0.0 0.0 0.0 0.007732484669275187 0.0 28 0.0 0.0 0.0 0.013388654010689444 0.0 29 0.0 0.0 0.0 0.02283946860647023 0.0 30 0.0 0.0 0.0 0.04460498100887446 0.0 31 0.0 0.0 0.0 0.10227642916721856 0.0 32 0.0 0.0 0.0 0.17841992403549783 0.0 33 0.0 0.0 0.0 0.2576778918955685 0.0 34 0.0 0.0 0.0 0.353975964860153 0.0 35 0.0 0.0 0.0 0.46215915314973455 0.0 36 0.0 0.0 0.0 0.6063556728156626 0.0 37 0.0 0.0 0.0 0.8293805778600348 0.0 38 0.0 0.0 0.0 1.1128692171933228 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 5940 0.0 25.930387 1 GGTATCA 2440 0.0 25.340425 1 TAGGACC 3490 0.0 23.82834 4 TGTAGGA 9325 0.0 22.484697 2 CTGTAGG 9080 0.0 22.294586 1 GTAGGAC 9135 0.0 22.132702 3 CTCGGAA 170 0.0 21.999847 37 AGGACCT 6035 0.0 21.508106 5 GTCCTAC 8120 0.0 21.16374 1 GGACCTG 6010 0.0 20.938665 6 GACGTTA 75 5.476219E-5 20.533192 7 TCCTACA 8715 0.0 20.322237 2 TAGGACG 9370 0.0 20.121887 4 AGGACGT 9250 0.0 20.026167 5 CCTACAG 8750 0.0 19.963648 3 GGACGTG 9085 0.0 19.784477 6 GACGTGG 4665 0.0 19.66546 7 GATATAC 2370 0.0 19.58987 1 TCGGAAA 180 0.0 19.55542 38 TAGGACA 2415 0.0 19.495037 4 >>END_MODULE