##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062388_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 966068 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.21528712264561 32.0 32.0 32.0 32.0 32.0 2 31.283485220502076 32.0 32.0 32.0 32.0 32.0 3 31.410332398961565 32.0 32.0 32.0 32.0 32.0 4 31.537237544355055 32.0 32.0 32.0 32.0 32.0 5 31.45218556043674 32.0 32.0 32.0 32.0 32.0 6 35.01841588790851 36.0 36.0 36.0 36.0 36.0 7 35.03598090403574 36.0 36.0 36.0 36.0 36.0 8 34.96936965099765 36.0 36.0 36.0 36.0 36.0 9 35.123033782301036 36.0 36.0 36.0 36.0 36.0 10 34.97913500912979 36.0 36.0 36.0 36.0 36.0 11 35.139605079559615 36.0 36.0 36.0 36.0 36.0 12 35.03325645813752 36.0 36.0 36.0 36.0 36.0 13 35.09300691048663 36.0 36.0 36.0 36.0 36.0 14 35.04706604504031 36.0 36.0 36.0 36.0 36.0 15 34.99810986390192 36.0 36.0 36.0 36.0 36.0 16 35.025751810431565 36.0 36.0 36.0 36.0 36.0 17 35.00137050393968 36.0 36.0 36.0 36.0 36.0 18 35.01151885788578 36.0 36.0 36.0 36.0 36.0 19 34.99342282323811 36.0 36.0 36.0 36.0 36.0 20 34.981356384850756 36.0 36.0 36.0 36.0 36.0 21 34.96492896980337 36.0 36.0 36.0 32.0 36.0 22 34.957014413064094 36.0 36.0 36.0 32.0 36.0 23 34.91736710045256 36.0 36.0 36.0 32.0 36.0 24 34.89965820211414 36.0 36.0 36.0 32.0 36.0 25 34.87526861463168 36.0 36.0 36.0 32.0 36.0 26 34.834155566688885 36.0 36.0 36.0 32.0 36.0 27 34.816918684813075 36.0 36.0 36.0 32.0 36.0 28 34.79739728466319 36.0 36.0 36.0 32.0 36.0 29 34.776086155425915 36.0 36.0 36.0 32.0 36.0 30 34.75387757383538 36.0 36.0 36.0 32.0 36.0 31 34.75964735401649 36.0 36.0 36.0 32.0 36.0 32 34.71944003941751 36.0 36.0 36.0 32.0 36.0 33 34.70144337665671 36.0 36.0 36.0 32.0 36.0 34 34.690272320374966 36.0 36.0 36.0 32.0 36.0 35 34.66084478525321 36.0 36.0 36.0 32.0 36.0 36 34.63549874335968 36.0 36.0 36.0 32.0 36.0 37 34.62626026325269 36.0 36.0 36.0 32.0 36.0 38 34.57820049934373 36.0 36.0 36.0 32.0 36.0 39 34.57058819876033 36.0 36.0 36.0 32.0 36.0 40 34.5769862991011 36.0 36.0 36.0 32.0 36.0 41 34.53499546615766 36.0 36.0 36.0 32.0 36.0 42 34.49812021514013 36.0 36.0 36.0 32.0 36.0 43 34.50475535883602 36.0 36.0 36.0 32.0 36.0 44 34.46171284008993 36.0 36.0 36.0 32.0 36.0 45 34.41390668151724 36.0 36.0 36.0 32.0 36.0 46 34.40522820339769 36.0 36.0 36.0 32.0 36.0 47 34.39189373832898 36.0 36.0 36.0 32.0 36.0 48 34.35112538661875 36.0 36.0 36.0 32.0 36.0 49 34.332170199199226 36.0 36.0 36.0 32.0 36.0 50 33.78204122277107 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 3.0 21 18.0 22 47.0 23 215.0 24 570.0 25 1319.0 26 2829.0 27 5340.0 28 9284.0 29 15212.0 30 22814.0 31 34093.0 32 52225.0 33 86844.0 34 189211.0 35 546043.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.29913949462909 19.83230911936924 11.971397927830186 25.89715345817149 2 15.51213159826134 21.51193905785632 38.025591311251915 24.950338032630423 3 17.816643428016597 25.524629346119248 29.907883854365608 26.750843371498544 4 11.62385553767086 16.87194961001589 38.454244797192736 33.04995005512051 5 13.32639110290373 37.97486305311841 34.473660239237816 14.22508560474004 6 31.796138363074196 38.29651566609769 17.37809075353987 12.529255217288243 7 28.504618722491585 32.0386349615141 21.703751702778685 17.752994613215634 8 26.65216113151455 34.301933197249056 20.30353970942004 18.74236596181635 9 27.12086519789497 14.448051275893622 19.80409246554073 38.626991060670676 10 15.44456497886277 26.994373066906263 32.802142292261 24.758919661969962 11 36.51782276195878 21.872166348538613 23.603928501927403 18.0060823875752 12 23.70640576025704 25.255365046766894 29.589014437907064 21.449214755069 13 28.25298012148213 20.40394672010666 26.53260433012997 24.81046882828124 14 22.38362102874746 21.572808539357478 25.785037906234344 30.25853252566072 15 24.592989313381665 28.63338812588762 22.994344083439263 23.779278477291456 16 24.80881263016682 26.82150738871384 24.942240090759658 23.427439890359686 17 22.485787749930648 26.96104207985359 26.41584236306347 24.137327807152293 18 23.488305171064564 25.94982961861898 27.89203244492106 22.669832765395398 19 24.712960164294852 26.10157877085257 26.107893026163794 23.077568038688785 20 24.30574245291222 26.135841369344604 25.953349039612117 23.605067138131062 21 26.018458327985194 25.229279926464805 24.93633988497704 23.81592186057296 22 24.35905132972006 26.276514696688018 25.647262925591157 23.71717104800076 23 23.647403702430886 25.736697623769757 26.26771614420517 24.34818252959419 24 23.71427270130053 26.9792602591122 25.828306081973523 23.47816095761375 25 23.849252847625632 26.12828496544757 26.306429775129704 23.7160324117971 26 22.86671331624689 26.814986108638315 27.26505794623153 23.053242628883268 27 23.985164605390096 26.521839042386254 26.007900065005774 23.48509628721788 28 22.971467846983856 26.265231847033544 26.777721651063903 23.9855786549187 29 23.22507318325418 26.05820708273124 26.448552275823232 24.268167458191346 30 23.35570580952894 26.397417159040565 26.819437141070818 23.427439890359686 31 23.936099736250448 26.030051714786122 25.82954823055934 24.204300318404087 32 23.01038850267269 26.59657498229938 26.051064728362803 24.34197178666512 33 23.14888806999093 26.22755333993052 26.52328821573637 24.100270374342177 34 23.53219442109665 26.153541986692446 27.300666205691527 23.013597386519375 35 24.50707403619621 26.207471937793198 26.199087434838958 23.086366591171636 36 23.217620291739298 26.371849600649227 26.240906437228023 24.16962367038345 37 24.431095947697262 26.221446109383606 25.523048067009775 23.824409875909357 38 23.362020064840156 26.37837088072475 26.294939900710922 23.96466915372417 39 23.69729667062774 26.235937842884766 25.607928220373722 24.458837266113772 40 24.42840462576133 26.252292799264648 26.556101640878282 22.763200934095735 41 23.34462998463876 26.13190789882286 27.162166638373282 23.361295478165097 42 24.334208358003785 27.184628825300084 25.98202196946799 22.499140847228148 43 23.002832098775656 26.19401532811355 26.605684071928682 24.19746850118211 44 23.01753085704112 26.378888442635507 26.412736991598933 24.190843708724437 45 23.150958317633954 26.775651403420873 26.572146060111713 23.501244218833456 46 23.534782230650432 26.03895377965112 26.046510183548154 24.37975380615029 47 23.70619873549274 25.848490996493002 26.523081190972064 23.922229077042196 48 23.87854685177441 26.837551807947268 25.578116654314186 23.705784685964133 49 22.90956744245747 26.584049984059092 26.593883660363453 23.912498913119986 50 22.602342692232842 26.887755313290572 26.062865139928036 24.44703685454854 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 11.0 1 13.0 2 15.0 3 32.0 4 49.0 5 66.0 6 83.0 7 83.0 8 83.0 9 121.0 10 159.0 11 222.0 12 285.0 13 580.5 14 876.0 15 1204.5 16 1533.0 17 2274.0 18 3015.0 19 3430.5 20 3846.0 21 4983.0 22 6120.0 23 6590.5 24 7061.0 25 9362.0 26 11663.0 27 15479.5 28 19296.0 29 21589.0 30 23882.0 31 24574.0 32 25266.0 33 28776.5 34 32287.0 35 37551.0 36 42815.0 37 48817.5 38 54820.0 39 55501.0 40 56182.0 41 58964.0 42 61746.0 43 58427.0 44 55108.0 45 57845.0 46 60582.0 47 62029.5 48 63477.0 49 62967.0 50 62457.0 51 59038.0 52 55619.0 53 53434.0 54 51249.0 55 51628.0 56 52007.0 57 51313.5 58 50620.0 59 45976.5 60 41333.0 61 36276.0 62 31219.0 63 27577.5 64 23936.0 65 21289.0 66 18642.0 67 16451.5 68 14261.0 69 13277.5 70 12294.0 71 9743.0 72 7192.0 73 6476.0 74 5760.0 75 4299.5 76 2839.0 77 2524.0 78 2209.0 79 1949.0 80 1689.0 81 1350.5 82 1012.0 83 859.5 84 707.0 85 576.5 86 446.0 87 331.5 88 217.0 89 138.0 90 59.0 91 40.5 92 22.0 93 16.5 94 11.0 95 6.0 96 1.0 97 3.0 98 5.0 99 3.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.012835535386742963 2 0.0038299581395926582 3 5.175619107557646E-4 4 3.105371464534588E-4 5 0.0 6 1.0351238215115293E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 966068.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.16017649966357 #Duplication Level Percentage of deduplicated Percentage of total 1 80.3875029444177 42.7341384489247 2 12.388126231550748 13.171099539386995 3 3.314099395081886 5.28534326339944 4 1.285298271330954 2.7330673183466394 5 0.6261083399925061 1.66420149309565 6 0.37714172124153433 1.2029352279952128 7 0.24181633828338256 0.8998499456552878 8 0.17730815607502282 0.7540586297422487 9 0.12946733697464596 0.6194255836062239 >10 0.8134923649482553 8.477027288710996 >50 0.12179433281437135 4.563202585435055 >100 0.12609645080112294 13.606885713619423 >500 0.010769106780574078 3.7241880828662746 >1k 9.790097073249162E-4 0.5645768792159276 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTTTAACGGCCGCGGTAT 1230 0.12732023004591808 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1067 0.11044771175528016 No Hit CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 1065 0.11024068699097786 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1059 0.10961961269807094 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1003 0.10382291929760638 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 1.0351238215115292E-4 0.0 6 0.0 0.0 0.0 1.0351238215115292E-4 0.0 7 0.0 0.0 0.0 1.0351238215115292E-4 0.0 8 0.0 0.0 0.0 1.0351238215115292E-4 0.0 9 0.0 0.0 0.0 1.0351238215115292E-4 0.0 10 0.0 0.0 0.0 1.0351238215115292E-4 0.0 11 0.0 0.0 0.0 1.0351238215115292E-4 0.0 12 0.0 0.0 0.0 1.0351238215115292E-4 0.0 13 0.0 0.0 0.0 1.0351238215115292E-4 0.0 14 0.0 0.0 0.0 1.0351238215115292E-4 0.0 15 0.0 0.0 0.0 1.0351238215115292E-4 0.0 16 0.0 0.0 0.0 1.0351238215115292E-4 0.0 17 0.0 0.0 0.0 1.0351238215115292E-4 0.0 18 0.0 0.0 0.0 2.0702476430230584E-4 0.0 19 0.0 0.0 0.0 2.0702476430230584E-4 0.0 20 0.0 0.0 0.0 2.0702476430230584E-4 0.0 21 0.0 0.0 0.0 4.140495286046117E-4 0.0 22 0.0 0.0 0.0 5.175619107557646E-4 0.0 23 0.0 0.0 0.0 0.001345660967964988 0.0 24 0.0 0.0 0.0 0.0021737600251742115 0.0 25 0.0 0.0 0.0 0.0024842971716276703 0.0 26 0.0 0.0 0.0 0.0038299581395926582 0.0 27 0.0 0.0 0.0 0.005072106725406493 0.0 28 0.0 0.0 0.0 0.009109089629301457 0.0 29 0.0 0.0 0.0 0.01635495637988216 0.0 30 0.0 0.0 0.0 0.03126073940964818 0.0 31 0.0 0.0 0.0 0.07359730370946972 0.0 32 0.0 0.0 0.0 0.12338675952417429 0.0 33 0.0 0.0 0.0 0.16934625719928617 0.0 34 0.0 0.0 0.0 0.2284518274075945 0.0 35 0.0 0.0 0.0 0.2885925214374143 0.0 36 0.0 0.0 0.0 0.38661874733455615 0.0 37 0.0 0.0 0.0 0.5328817433141353 0.0 38 0.0 0.0 0.0 0.7165127092502805 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 100 4.622052E-8 21.999794 14 ACTGCGT 50 0.0025802073 21.999794 8 ACGGTAA 50 0.0025802073 21.999794 42 ATAACGC 320 0.0 19.938345 3 GTACTAA 80 8.9797E-5 19.25181 1 TCTAGAC 115 2.019442E-7 19.131245 3 TAACGCC 325 0.0 18.954647 4 ACCGACT 70 8.1222237E-4 18.856964 41 CGAATGC 350 0.0 18.856964 43 TTAACGG 410 0.0 18.780312 35 AATAACG 345 0.0 18.494493 2 CTAGACA 155 7.203198E-10 18.452394 4 AACGCCG 335 0.0 18.38884 5 CGCAATA 335 0.0 18.387888 36 ATACGAA 335 0.0 18.387888 40 AACAACG 60 0.007411454 18.33316 7 CCGGATC 60 0.007411454 18.33316 27 ATCGTTT 340 0.0 18.117477 29 GTATTAG 525 0.0 18.020744 1 CATCGTT 330 0.0 17.999832 28 >>END_MODULE