##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062387_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1056445 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.241627344537577 32.0 32.0 32.0 32.0 32.0 2 31.376345195443207 32.0 32.0 32.0 32.0 32.0 3 31.490992905451776 32.0 32.0 32.0 32.0 32.0 4 31.606563522000673 32.0 32.0 32.0 32.0 32.0 5 31.53399940366039 32.0 32.0 32.0 32.0 32.0 6 35.139941028638496 36.0 36.0 36.0 36.0 36.0 7 35.15487318317565 36.0 36.0 36.0 36.0 36.0 8 35.08742244035421 36.0 36.0 36.0 36.0 36.0 9 35.22169634954967 36.0 36.0 36.0 36.0 36.0 10 35.10034313191884 36.0 36.0 36.0 36.0 36.0 11 35.237918680101664 36.0 36.0 36.0 36.0 36.0 12 35.13807249785838 36.0 36.0 36.0 36.0 36.0 13 35.18881815901443 36.0 36.0 36.0 36.0 36.0 14 35.14961876860603 36.0 36.0 36.0 36.0 36.0 15 35.10863319907804 36.0 36.0 36.0 36.0 36.0 16 35.116753830062144 36.0 36.0 36.0 36.0 36.0 17 35.08585491909186 36.0 36.0 36.0 36.0 36.0 18 35.10906862165091 36.0 36.0 36.0 36.0 36.0 19 35.07467686438953 36.0 36.0 36.0 36.0 36.0 20 35.073281619014715 36.0 36.0 36.0 36.0 36.0 21 35.05658505648661 36.0 36.0 36.0 36.0 36.0 22 35.03234148488563 36.0 36.0 36.0 36.0 36.0 23 34.97996582879374 36.0 36.0 36.0 36.0 36.0 24 34.9483740279901 36.0 36.0 36.0 32.0 36.0 25 34.92058176242019 36.0 36.0 36.0 32.0 36.0 26 34.8644983884632 36.0 36.0 36.0 32.0 36.0 27 34.83641552565444 36.0 36.0 36.0 32.0 36.0 28 34.81605384094771 36.0 36.0 36.0 32.0 36.0 29 34.77841534580598 36.0 36.0 36.0 32.0 36.0 30 34.755115505303166 36.0 36.0 36.0 32.0 36.0 31 34.74730440297412 36.0 36.0 36.0 32.0 36.0 32 34.70963372442484 36.0 36.0 36.0 32.0 36.0 33 34.67718906332085 36.0 36.0 36.0 32.0 36.0 34 34.6624623146496 36.0 36.0 36.0 32.0 36.0 35 34.612110426950764 36.0 36.0 36.0 32.0 36.0 36 34.57473886477763 36.0 36.0 36.0 32.0 36.0 37 34.54726559357089 36.0 36.0 36.0 32.0 36.0 38 34.488554539043676 36.0 36.0 36.0 32.0 36.0 39 34.41507414015874 36.0 36.0 36.0 32.0 36.0 40 34.3799980122013 36.0 36.0 36.0 32.0 36.0 41 34.366647577488656 36.0 36.0 36.0 32.0 36.0 42 34.277502378259165 36.0 36.0 36.0 32.0 36.0 43 34.3030105684631 36.0 36.0 36.0 32.0 36.0 44 34.26847777215094 36.0 36.0 36.0 32.0 36.0 45 34.16356932921259 36.0 36.0 36.0 32.0 36.0 46 34.22061347254235 36.0 36.0 36.0 32.0 36.0 47 34.166933441873454 36.0 36.0 36.0 32.0 36.0 48 34.140650010175634 36.0 36.0 36.0 32.0 36.0 49 34.162541353312285 36.0 36.0 36.0 32.0 36.0 50 33.61765165247599 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 4.0 21 29.0 22 75.0 23 252.0 24 739.0 25 1864.0 26 4024.0 27 7399.0 28 12517.0 29 18452.0 30 26125.0 31 37203.0 32 55539.0 33 84936.0 34 184810.0 35 622473.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.161733130867134 17.45712424785195 11.376984743086297 26.00415787819462 2 15.966213939258548 20.11563670234719 36.85863091293927 27.059518445454994 3 19.199688765749844 23.848513733400605 28.3183411441645 28.63345635668505 4 12.209544471831919 15.37573217321505 35.60548405783931 36.80923929711371 5 14.178494857754071 36.90897301799904 33.4346795147878 15.477852609459083 6 35.330894950768524 34.834415270938756 16.36499255043836 13.469697227854354 7 30.404422378827107 30.21747464373441 20.517206290909606 18.86089668652888 8 28.45259336737833 33.35706070831893 19.168910828296788 19.021435096005945 9 26.99373843408791 14.115737213011561 18.16062360085002 40.729900752050504 10 15.764474250907526 26.85866277941587 31.739087221767342 25.637775747909263 11 38.21164376754114 20.701219656489453 21.569793032292264 19.517343543677143 12 24.235147120768236 23.486977552073228 29.051299405080243 23.22657592207829 13 30.300110275499435 19.023233580546076 25.239553407891563 25.43710273606293 14 23.417309940413368 19.55974991599184 24.61169298922329 32.4112471543715 15 25.586376952893904 27.25082706624576 22.504531707755728 24.65826427310461 16 26.242255867555812 25.360903785809956 24.215269133745725 24.181571212888507 17 24.01109380990018 25.946736460487767 25.603604541646753 24.4385651879653 18 25.436629450657627 24.061546034104946 27.06274344618035 23.439081069057075 19 25.46417466124597 25.657085792445418 24.75595038075811 24.1227891655505 20 25.21219751146534 24.092498899611435 26.032685090089874 24.662618498833353 21 26.412070670976718 24.691867536880764 23.76384951417253 25.132212277969984 22 25.197714978063225 24.924061356719942 24.84596926484578 25.032254400371055 23 23.963670612289327 24.444149955747815 25.29294000160917 26.299239430353687 24 24.427584966562385 25.77313537382448 24.955771478874905 24.84350818073823 25 25.268329160533675 24.45626606212344 24.853920459654784 25.421484317688098 26 23.939154428294895 25.339795256733666 25.80683329468169 24.914217020289744 27 25.33695554430188 25.189669126173158 25.158621603585612 24.314753725939354 28 24.38546256549087 24.502648031842643 25.488880159402527 25.623009243263965 29 24.07905759410097 24.982180804490532 25.79869278571057 25.14006881569793 30 24.717803577091093 24.907780338777695 25.985072578316903 24.389343505814313 31 24.771568799132943 24.804509463341677 24.864806023976637 25.559115713548742 32 24.43771327423576 25.169412510826405 24.957664620496097 25.435209594441737 33 24.058895635835277 24.515332080704628 25.678572949845947 25.74719933361415 34 24.495075465357875 25.31225004614533 26.084651827591593 24.108022660905206 35 25.54311866684967 24.844738722792005 25.67242023957707 23.93972237078125 36 24.18147655580745 25.73423131350899 25.21711967968044 24.86717245100313 37 25.476764053026894 25.09605327300522 25.135619932888133 24.29156274107975 38 24.580550809554687 25.06358589420178 25.021652807292384 25.334210488951154 39 24.997420594541126 24.49147849627761 25.30704390668705 25.204057002494213 40 25.81175546289679 24.91554221942458 24.99003734221848 24.282664975460154 41 24.040910790433955 25.02051692231967 26.24149861090734 24.697073676339045 42 26.02321938198392 25.69845093686846 25.08280128165688 23.195528399490744 43 24.661577270941695 24.317309467127963 25.370937436402276 25.65017582552807 44 24.19302471969672 24.958895162549872 25.864100828722748 24.983979289030664 45 24.569286616908595 25.256591682482288 25.3045828225795 24.86953887802962 46 24.20213470851271 24.62051940282684 25.919689070125816 25.25765681853463 47 25.057717155176086 24.386977078787822 26.122420002934373 24.432885763101723 48 25.211156283573683 26.092603022400596 24.340500451987563 24.355740242038156 49 24.11180894414759 25.186829413741368 25.903856802767773 24.79750483934327 50 24.08114004988428 26.33662897737222 24.23192878001221 25.350302192731284 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 8.0 1 14.0 2 20.0 3 61.0 4 102.0 5 143.5 6 185.0 7 162.5 8 140.0 9 196.0 10 252.0 11 355.5 12 459.0 13 852.0 14 1245.0 15 1621.0 16 1997.0 17 2311.0 18 2625.0 19 2890.0 20 3155.0 21 3766.0 22 4377.0 23 4686.0 24 4995.0 25 5933.5 26 6872.0 27 9175.0 28 11478.0 29 13290.5 30 15103.0 31 16098.0 32 17093.0 33 20087.5 34 23082.0 35 27135.5 36 31189.0 37 36121.5 38 41054.0 39 43321.5 40 45589.0 41 49002.0 42 52415.0 43 53646.0 44 54877.0 45 62995.0 46 71113.0 47 77854.5 48 84596.0 49 84233.0 50 83870.0 51 78530.0 52 73190.0 53 71234.5 54 69279.0 55 70737.5 56 72196.0 57 70602.0 58 69008.0 59 63575.5 60 58143.0 61 51524.5 62 44906.0 63 38931.5 64 32957.0 65 28474.0 66 23991.0 67 20655.0 68 17319.0 69 16022.0 70 14725.0 71 11317.5 72 7910.0 73 7102.0 74 6294.0 75 4457.0 76 2620.0 77 2372.0 78 2124.0 79 1824.0 80 1524.0 81 1233.5 82 943.0 83 816.0 84 689.0 85 567.5 86 446.0 87 325.0 88 204.0 89 131.0 90 58.0 91 38.0 92 18.0 93 11.5 94 5.0 95 3.5 96 2.0 97 2.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.012968020105164017 2 0.0031236836749665153 3 5.679424863575482E-4 4 9.465708105959137E-5 5 0.0 6 6.625995674171396E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 9.465708105959137E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1056445.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.168002315403996 #Duplication Level Percentage of deduplicated Percentage of total 1 78.94843431222426 42.76478972622085 2 12.704972287780356 13.7640593660326 3 3.673999862203198 5.970396991278503 4 1.5020756126249837 3.25457741050328 5 0.8277171791410384 2.2417893038105716 6 0.49041891934465 1.5939007895147357 7 0.3241852322616769 1.2292326488239211 8 0.23299449532346414 1.0096677089726234 9 0.1765768933524031 0.8608335811163834 >10 0.9259013577945371 9.280551844996092 >50 0.09082618356678368 3.4625748458121657 >100 0.092042277548148 10.310485002665466 >500 0.008095496328283098 2.918043739694548 >1k 0.0017598905061484995 1.3390970405582918 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2357 0.22310674005745684 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2209 0.20909749206063735 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1477 0.13980850872501643 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1268 0.12002517878356184 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1244 0.11775340883813167 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1179 0.11160069856925821 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1159 0.10970755694806639 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1103 0.10440676040872929 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.465708105959137E-5 2 0.0 0.0 0.0 0.0 9.465708105959137E-5 3 0.0 0.0 0.0 0.0 9.465708105959137E-5 4 0.0 0.0 0.0 0.0 9.465708105959137E-5 5 0.0 0.0 0.0 0.0 9.465708105959137E-5 6 0.0 0.0 0.0 0.0 9.465708105959137E-5 7 0.0 0.0 0.0 0.0 9.465708105959137E-5 8 0.0 0.0 0.0 0.0 9.465708105959137E-5 9 0.0 0.0 0.0 0.0 9.465708105959137E-5 10 0.0 0.0 0.0 0.0 1.8931416211918274E-4 11 0.0 0.0 0.0 9.465708105959137E-5 1.8931416211918274E-4 12 0.0 0.0 0.0 1.8931416211918274E-4 6.625995674171396E-4 13 0.0 0.0 0.0 1.8931416211918274E-4 0.0010412278916555051 14 0.0 0.0 0.0 1.8931416211918274E-4 0.0010412278916555051 15 0.0 0.0 0.0 2.839712431787741E-4 0.0011358849727150964 16 0.0 0.0 0.0 2.839712431787741E-4 0.0013251991348342792 17 0.0 0.0 0.0 4.732854052979568E-4 0.0013251991348342792 18 0.0 0.0 0.0 6.625995674171396E-4 0.001514513296953462 19 0.0 0.0 0.0 8.519137295363222E-4 0.001514513296953462 20 0.0 0.0 0.0 0.0011358849727150964 0.001798484540132236 21 0.0 0.0 0.0 0.001514513296953462 0.0018931416211918272 22 0.0 0.0 0.0 0.0021771128643706013 0.0018931416211918272 23 0.0 0.0 0.0 0.003407654918145289 0.0018931416211918272 24 0.0 0.0 0.0 0.005679424863575482 0.0019877987022514187 25 0.0 0.0 0.0 0.007193938160528944 0.0019877987022514187 26 0.0 0.0 0.0 0.009181736862780362 0.0021771128643706013 27 0.0 0.0 0.0 0.011264192646091372 0.0021771128643706013 28 0.0 0.0 0.0 0.016186360861190123 0.0021771128643706013 29 0.0 0.0 0.0 0.025178783561851305 0.0022717699454301928 30 0.0 0.0 0.0 0.039850631126087964 0.0022717699454301928 31 0.0 0.0 0.0 0.07193938160528944 0.0023664270264897843 32 0.0 0.0 0.0 0.11235795521773495 0.0023664270264897843 33 0.0 0.0 0.0 0.1489902455877968 0.002555741188608967 34 0.0 0.0 0.0 0.19698138568500964 0.0026503982696685583 35 0.0 0.0 0.0 0.2505572935647383 0.00274505535072815 36 0.0 0.0 0.0 0.3288386996010204 0.00274505535072815 37 0.0 0.0 0.0 0.43996611276498065 0.00274505535072815 38 0.0 0.0 0.0 0.5810998206248313 0.002839712431787741 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACGCA 25 0.0023526836 35.199924 4 TATACCG 45 1.0370677E-6 34.22215 5 ATCGTGT 70 3.2149124E-5 21.999952 8 GTATAGT 100 1.1221655E-6 19.801832 1 CTATACC 145 2.9649527E-10 19.724096 4 TACCGTC 280 0.0 19.642815 7 ACCGTCG 270 0.0 19.555513 8 CGTCGTA 290 0.0 18.965477 10 TGGTATA 290 0.0 18.965477 44 ATACCGT 325 0.0 18.953804 6 TCTATAC 140 4.0799932E-9 18.857103 3 TAGACCG 60 0.00741159 18.333294 5 CCGTCGT 290 0.0 18.206858 9 CGAGCCG 510 0.0 18.117609 15 TAGGACG 510 0.0 18.117609 4 TCCTACA 565 0.0 17.911467 2 GTATTAG 345 0.0 17.856726 1 GTCCTAC 555 0.0 17.839489 1 CGTCTTA 185 2.1827873E-11 17.837801 15 TTAGGAC 385 0.0 17.714249 3 >>END_MODULE