##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062385_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 865345 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.231563133779012 32.0 32.0 32.0 32.0 32.0 2 31.383633117427152 32.0 32.0 32.0 32.0 32.0 3 31.496162802119386 32.0 32.0 32.0 32.0 32.0 4 31.60934540558968 32.0 32.0 32.0 32.0 32.0 5 31.541321669391976 32.0 32.0 32.0 32.0 32.0 6 35.14318682144116 36.0 36.0 36.0 36.0 36.0 7 35.15601291970255 36.0 36.0 36.0 36.0 36.0 8 35.1051465022621 36.0 36.0 36.0 36.0 36.0 9 35.23147415192784 36.0 36.0 36.0 36.0 36.0 10 35.10731904616078 36.0 36.0 36.0 36.0 36.0 11 35.24072017519024 36.0 36.0 36.0 36.0 36.0 12 35.14064448283632 36.0 36.0 36.0 36.0 36.0 13 35.176247623780114 36.0 36.0 36.0 36.0 36.0 14 35.140751954422804 36.0 36.0 36.0 36.0 36.0 15 35.10138730795232 36.0 36.0 36.0 36.0 36.0 16 35.10327903899601 36.0 36.0 36.0 36.0 36.0 17 35.08273347624358 36.0 36.0 36.0 36.0 36.0 18 35.09088282708053 36.0 36.0 36.0 36.0 36.0 19 35.06046952371597 36.0 36.0 36.0 36.0 36.0 20 35.060742247311765 36.0 36.0 36.0 36.0 36.0 21 35.02194038215972 36.0 36.0 36.0 36.0 36.0 22 34.989236662833896 36.0 36.0 36.0 36.0 36.0 23 34.91568102895377 36.0 36.0 36.0 32.0 36.0 24 34.904362999728434 36.0 36.0 36.0 32.0 36.0 25 34.859082793567886 36.0 36.0 36.0 32.0 36.0 26 34.80491711398344 36.0 36.0 36.0 32.0 36.0 27 34.77353078829831 36.0 36.0 36.0 32.0 36.0 28 34.72715968775459 36.0 36.0 36.0 32.0 36.0 29 34.69850637606966 36.0 36.0 36.0 32.0 36.0 30 34.67516424085191 36.0 36.0 36.0 32.0 36.0 31 34.64858986878066 36.0 36.0 36.0 32.0 36.0 32 34.6035477179622 36.0 36.0 36.0 32.0 36.0 33 34.56583328036795 36.0 36.0 36.0 32.0 36.0 34 34.531495530684296 36.0 36.0 36.0 32.0 36.0 35 34.454850955399294 36.0 36.0 36.0 32.0 36.0 36 34.410152020292486 36.0 36.0 36.0 32.0 36.0 37 34.3530060264981 36.0 36.0 36.0 32.0 36.0 38 34.26600026578995 36.0 36.0 36.0 32.0 36.0 39 34.12938192281691 36.0 36.0 36.0 32.0 36.0 40 34.023186128076084 36.0 36.0 36.0 32.0 36.0 41 34.03927450901086 36.0 36.0 36.0 32.0 36.0 42 33.88020500494023 36.0 36.0 36.0 32.0 36.0 43 33.911267760257466 36.0 36.0 36.0 32.0 36.0 44 33.89610155487118 36.0 36.0 36.0 32.0 36.0 45 33.697960928878075 36.0 36.0 36.0 27.0 36.0 46 33.80679035529182 36.0 36.0 36.0 32.0 36.0 47 33.71467680520486 36.0 36.0 36.0 27.0 36.0 48 33.72741276600662 36.0 36.0 36.0 27.0 36.0 49 33.77473377670178 36.0 36.0 36.0 32.0 36.0 50 33.13996729628067 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 9.0 21 12.0 22 84.0 23 207.0 24 696.0 25 1699.0 26 3501.0 27 6594.0 28 11507.0 29 17576.0 30 25439.0 31 36081.0 32 53886.0 33 76372.0 34 151538.0 35 480141.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.17629327582102 17.309981669105394 12.136069329153981 25.377655725919606 2 14.811360657897474 21.08211930632311 37.03342879133528 27.073091244444136 3 19.118887648525778 25.236381621978925 28.250232856987672 27.39449787250762 4 12.174219530938528 16.29951059981857 35.5318399020044 35.9944299672385 5 13.527783716321236 37.541327447434256 33.918841618082965 15.012047218161543 6 34.458171884082425 34.44083763704167 17.261443203183955 13.839547275691954 7 29.302185833395928 30.757905806354692 21.370551629696827 18.569356730552556 8 28.56860558505567 33.01746702182366 20.293062304629945 18.120865088490717 9 27.214579156290263 14.80542442609595 18.201988802154055 39.77800761545973 10 15.288815443551416 27.75182152782994 32.58446053308218 24.374902495536464 11 37.286515782722496 21.354604232993776 21.012890812334962 20.345989171948762 12 23.322143191443875 24.19636098896972 29.623907227753094 22.857588591833313 13 30.978395899901194 19.743223800911775 24.828478814807966 24.449901484379062 14 24.029722249507422 19.441956676238956 24.98876170775818 31.539559366495446 15 25.827617886507692 26.586968203433315 24.222015496709403 23.36339841334959 16 26.060704112232692 25.49757611126198 25.17134784392352 23.270371932581803 17 23.824486187589923 25.792371828577043 26.93295737538207 23.450184608450964 18 25.574308512789695 23.875217398840924 28.13617690054256 22.414297187826822 19 24.61827363652647 27.630482639871957 25.035563850256253 22.715679873345312 20 24.368662209870052 23.762314452617165 28.291721798820124 23.57730153869266 21 25.401545048506662 25.75793469656611 23.769941468431664 25.070578786495563 22 23.976679821342934 26.1150177096996 25.07208107748933 24.836221391468143 23 23.078540928762518 25.265067689765353 25.05971606700218 26.59667531446995 24 23.37842132328724 27.124903940047034 25.09091749533423 24.40575724133149 25 25.41275445053707 24.45683513511952 24.397667982134294 25.732742432209122 26 22.947957173150595 25.313141001565846 26.038285308171886 25.700616517111673 27 25.597073999387526 25.767757368448425 25.397153736371042 23.238014895793007 28 24.25217687743039 24.134767058225332 25.70211880810544 25.910937256238842 29 23.13793920343909 26.11293761447746 26.876332561001682 23.872790621081766 30 25.322501430065465 24.824665306900716 26.43720134743946 23.41563191559436 31 23.449144560839898 25.25824959987057 25.564485840907388 25.728119998382148 32 23.530614957040257 25.931391525923186 25.6645615332613 24.87343198377526 33 23.059588950071934 25.129168135252417 26.112013127712068 25.699229786963578 34 23.039250241233265 26.44367275479722 27.113001172942585 23.404075831026933 35 25.52831529621134 25.2186122298043 25.98535844085307 23.267714033131295 36 23.82587291773801 26.344983792591393 25.8495744471858 23.979568842484788 37 25.434248767832486 25.848187717037714 25.746147490307337 22.97141602482247 38 24.031917905575234 25.726039903160014 24.83344793117196 25.408594260092794 39 24.04474515944508 25.402816217809082 26.194523571523497 24.357915051222346 40 25.59256712640623 25.4907580213672 24.68402775771513 24.232647094511435 41 22.88185636942491 25.646534041336118 26.653646811387365 24.81796277785161 42 26.396755051453468 25.805199082446883 25.461636688257283 22.336409177842363 43 24.894579618533648 23.992396096354632 25.344342429897903 25.768681855213813 44 24.262692914386747 25.030132490509565 26.915623248530935 23.791551346572753 45 24.91630505752041 25.254436091963324 25.798958796780475 24.030300053735793 46 23.593187903524964 24.89856623327397 27.029166469249766 24.4790793939513 47 25.13078598709185 24.177524571124813 27.298476330249784 23.39321311153355 48 24.10495236004137 27.876627241158154 24.545008060368986 23.473412338431494 49 23.256620191946563 25.250853705747417 27.80359278669201 23.688933315614 50 23.30388457782734 27.85883087092431 23.98234230278097 24.854942248467374 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 16.0 1 22.0 2 28.0 3 119.5 4 211.0 5 229.5 6 248.0 7 210.0 8 172.0 9 247.5 10 323.0 11 469.5 12 616.0 13 1005.0 14 1394.0 15 1812.0 16 2230.0 17 2563.0 18 2896.0 19 3154.0 20 3412.0 21 4104.5 22 4797.0 23 5207.0 24 5617.0 25 6086.5 26 6556.0 27 8152.0 28 9748.0 29 11083.5 30 12419.0 31 13828.0 32 15237.0 33 17349.0 34 19461.0 35 22374.5 36 25288.0 37 28854.5 38 32421.0 39 34295.0 40 36169.0 41 39534.5 42 42900.0 43 45481.5 44 48063.0 45 59028.0 46 69993.0 47 78701.5 48 87410.0 49 82591.5 50 77773.0 51 68323.0 52 58873.0 53 55385.0 54 51897.0 55 52236.0 56 52575.0 57 50309.5 58 48044.0 59 44718.5 60 41393.0 61 36400.0 62 31407.0 63 27084.5 64 22762.0 65 19381.0 66 16000.0 67 14027.5 68 12055.0 69 11064.0 70 10073.0 71 7699.0 72 5325.0 73 4712.5 74 4100.0 75 2865.5 76 1631.0 77 1511.5 78 1392.0 79 1192.0 80 992.0 81 769.0 82 546.0 83 491.0 84 436.0 85 348.0 86 260.0 87 189.5 88 119.0 89 78.0 90 37.0 91 27.0 92 17.0 93 10.5 94 4.0 95 3.5 96 3.0 97 4.0 98 5.0 99 3.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01606295754872334 2 0.004969116363993551 3 8.089259197198805E-4 4 0.0 5 0.0 6 6.933650740456119E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 2.311216913485373E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 865345.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.28651209679042 #Duplication Level Percentage of deduplicated Percentage of total 1 81.42753128748826 46.64699256112477 2 11.817550988304145 13.53972555291846 3 3.1629057824554447 5.435755211029266 4 1.1981233438105932 2.7454522971461013 5 0.6044200156398722 1.73125572687479 6 0.3469208308533239 1.1924330623984514 7 0.233479927897145 0.9362675499686286 8 0.17499675257791858 0.8019962866763177 9 0.11566751797965559 0.5963569801152537 >10 0.7395456061308301 8.151759770299307 >50 0.09155214389874552 3.7086685363817082 >100 0.0786156420349952 8.893657370609796 >500 0.006467096505425775 2.523645754037452 >1k 0.0018188708921509991 1.6692322452386454 >5k 4.0419353158911096E-4 1.4268010951810974 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 6927 0.8004899779856588 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 5397 0.6236818841040279 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 2441 0.28208402429088975 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 2387 0.27584373862447925 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 1817 0.20997405659014612 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 1552 0.17935043248646493 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 1484 0.17149229498061466 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 1391 0.16074513633290768 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 1156 0.13358833759945454 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 1099 0.12700136939602125 No Hit TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1091 0.12607688263062708 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 948 0.10955168169920668 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 895 0.10342695687847045 No Hit ACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 882 0.10192466588470495 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 868 0.10030681404526519 No Hit ACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGC 866 0.10007569235391664 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 1.1556084567426865E-4 7 1.1556084567426865E-4 0.0 0.0 0.0 1.1556084567426865E-4 8 1.1556084567426865E-4 0.0 0.0 0.0 1.1556084567426865E-4 9 1.1556084567426865E-4 0.0 0.0 0.0 1.1556084567426865E-4 10 1.1556084567426865E-4 0.0 0.0 0.0 1.1556084567426865E-4 11 1.1556084567426865E-4 0.0 0.0 0.0 1.1556084567426865E-4 12 1.1556084567426865E-4 0.0 0.0 0.0 5.778042283713432E-4 13 1.1556084567426865E-4 0.0 0.0 1.1556084567426865E-4 5.778042283713432E-4 14 1.1556084567426865E-4 0.0 0.0 1.1556084567426865E-4 5.778042283713432E-4 15 2.311216913485373E-4 0.0 0.0 1.1556084567426865E-4 9.244867653941492E-4 16 3.4668253702280596E-4 0.0 0.0 3.4668253702280596E-4 0.0010400476110684178 17 4.622433826970746E-4 0.0 0.0 3.4668253702280596E-4 0.0010400476110684178 18 4.622433826970746E-4 0.0 0.0 5.778042283713432E-4 0.0010400476110684178 19 4.622433826970746E-4 0.0 0.0 9.244867653941492E-4 0.0010400476110684178 20 4.622433826970746E-4 0.0 0.0 0.0013867301480912238 0.0011556084567426864 21 4.622433826970746E-4 0.0 0.0 0.0018489735307882984 0.0015022909937654923 22 4.622433826970746E-4 0.0 0.0 0.003235703678879522 0.0015022909937654923 23 5.778042283713432E-4 0.0 0.0 0.004737994672645014 0.0015022909937654923 24 6.933650740456119E-4 0.0 0.0 0.007973698351524536 0.0015022909937654923 25 6.933650740456119E-4 0.0 0.0 0.009822671882312835 0.0015022909937654923 26 6.933650740456119E-4 0.0 0.0 0.012827253869843819 0.001617851839439761 27 6.933650740456119E-4 0.0 0.0 0.01617851839439761 0.001617851839439761 28 9.244867653941492E-4 0.0 0.0 0.02368997336322507 0.001617851839439761 29 9.244867653941492E-4 0.0 0.0 0.032934841017166566 0.001617851839439761 30 9.244867653941492E-4 0.0 0.0 0.05038452871398113 0.001617851839439761 31 9.244867653941492E-4 0.0 0.0 0.07950586182389682 0.001617851839439761 32 9.244867653941492E-4 0.0 0.0 0.1168320149766856 0.0017334126851140297 33 9.244867653941492E-4 0.0 0.0 0.15438928982082292 0.0017334126851140297 34 9.244867653941492E-4 0.0 0.0 0.20720059629396367 0.0017334126851140297 35 0.0010400476110684178 0.0 0.0 0.2581629292363162 0.0017334126851140297 36 0.0010400476110684178 0.0 0.0 0.3390555212083042 0.0017334126851140297 37 0.0010400476110684178 0.0 0.0 0.4580831922528009 0.0017334126851140297 38 0.0011556084567426864 0.0 0.0 0.5980273763643402 0.0017334126851140297 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGCA 45 4.068589E-5 29.332947 4 TATAACG 50 0.0025774515 22.003525 2 TAACGGC 70 3.2143173E-5 21.999712 36 GGCGTTA 155 1.8189894E-12 21.290043 42 AGTACTC 300 0.0 20.533064 5 TCGTATA 55 0.00448294 19.999739 44 TCATAGG 100 1.1228221E-6 19.79974 3 GTAGGAC 345 0.0 19.767857 3 GACCGAG 145 2.9467628E-10 19.723879 7 ATAACGC 235 0.0 19.659317 3 TTAACGG 90 1.0015341E-5 19.555298 35 GCATAAG 70 8.099429E-4 18.864525 1 CGCGTAT 70 8.121492E-4 18.856895 42 GCGGCGT 180 1.4551915E-11 18.333092 40 GCGTAAC 120 3.159821E-7 18.333092 11 TGGTATA 240 0.0 18.333092 44 GTGTTAC 85 1.4259557E-4 18.12474 1 GTCATAA 85 1.4259557E-4 18.12474 1 TACGACG 255 0.0 18.117409 5 GTCCTAA 195 1.8189894E-12 18.05835 1 >>END_MODULE