FastQCFastQC Report
Thu 2 Feb 2017
SRR4062382_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4062382_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1310
Sequences flagged as poor quality0
Sequence length25
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGG292.213740458015267No Hit
GTATCAACGCAGAGTACTTTTTTTT40.3053435114503817No Hit
CCTCACTCCTTGCTACTCAAAGTTT30.22900763358778628No Hit
TATCAACGCAGAGTACTTTTTTTTT30.22900763358778628No Hit
GAGCGCCGGGTTTGCGTTGCACGAC30.22900763358778628No Hit
GCGCCGTGCCACGCCACCGCCCACC30.22900763358778628No Hit
GTAATAGATGGTGTGTTGATGATGA30.22900763358778628No Hit
GCTCTGGCGTGGGCCCGTGGCTACA30.22900763358778628No Hit
GCACCATCTCGGCACGGCGCAGCAC20.15267175572519084No Hit
GTCCTACAGTGGACATTTCTAAATT20.15267175572519084No Hit
ATGAGCTCTTGAAATTCAAACTGGC20.15267175572519084No Hit
ACAGTAGCAATAGGAAATTACTGTA20.15267175572519084No Hit
GTTGTTGCCTTTGTCTCTCCACCAA20.15267175572519084No Hit
CTAATACTCTAAATAGAAGTTTGAT20.15267175572519084No Hit
GCACTATGCACAATCAGATGTGTAA20.15267175572519084No Hit
AAAGAATCTCCCGCGATATCTCTCA20.15267175572519084No Hit
CTTCCTTAGGTTACCTCTCGAACTT20.15267175572519084No Hit
ACTCTAAAGCTGGAAAAGTTATCTT20.15267175572519084No Hit
CCTAAAAACCAGACAGAAGCATTCT20.15267175572519084No Hit
TATTCCTCTTCATTTGTCTCCTCTG20.15267175572519084No Hit
GATATACACACAATGAAATAAAAAG20.15267175572519084No Hit
GGATGATAGCATGTGGCCATGATAA20.15267175572519084No Hit
GGGCTTGGCGCGCGCTGACCGGCAA20.15267175572519084No Hit
CTGAAGGACCTGGAATATGGCGAGA20.15267175572519084No Hit
GTTGAGGATCTGGCATTTCCGTGAG20.15267175572519084No Hit
GTCATGAGGAGACGGTGCTTCTTCG20.15267175572519084No Hit
GTGGTATCAACGCAGAGTACTTTTT20.15267175572519084No Hit
GCCAAGGTGGATGGATCACCTGAGG20.15267175572519084No Hit
GAAACCACGTCTCTACTAAAAATAC20.15267175572519084No Hit
GGGCAGTCTGCAAAGCAGTGACCTT20.15267175572519084No Hit
AAATAATTGAGAAAATGATAGGCAA20.15267175572519084No Hit
GAGTACTTTTTTTTTTTTTTTTTTT20.15267175572519084No Hit
CTACAACAGTTTTGAAAAAGAAGGA20.15267175572519084No Hit
CTACAGGTCGATGATCGGCTGCTAC20.15267175572519084No Hit
ATGCCCACAGCATGCAGAAGTTCCC20.15267175572519084No Hit
ATTTCTTATAGTTCTGGAAGCTGAG20.15267175572519084No Hit
GTAAAGTGCAGTGCCTAACACACAG20.15267175572519084No Hit
CTACAAAGATACTAGGTAGTTTAAA20.15267175572519084No Hit
ATTTTTAGTATGTTGATTCTTCCAA20.15267175572519084No Hit
GCATAATGACGTCTTTGGAGGGTTA20.15267175572519084No Hit
TTCTTGAGGAATGAGAGCTGTTAGC20.15267175572519084No Hit
GTGCAGGAAAGGGTGCAGCGGGAGG20.15267175572519084No Hit
GAAGAGGACCAGCACGCCTGCCTTC20.15267175572519084No Hit
AGCCGACGTCGGGCGAAATCCGCCC20.15267175572519084No Hit
GGCAGGAAGTATGGGAGCTGTAAAA20.15267175572519084No Hit
CACTGAGACTCAGGCTTTCTGTTGA20.15267175572519084No Hit
TATGAAGAGAGGCAGGAAAATGTGA20.15267175572519084No Hit
GTAGAATTAAAATTCAAGACGAGAT20.15267175572519084No Hit
ACTCCATTCCATTTCAATTCTCTCG20.15267175572519084No Hit
CCTTATTTCCATGCCCCGACCTCTT20.15267175572519084No Hit
GTTCAGTCTCGCCTGGTGATTCGAC20.15267175572519084No Hit
CTCCTGGGAGGAACAAGTTTATCTT20.15267175572519084No Hit
TTTTATTTGCATGCAACTTTGTGAG20.15267175572519084No Hit
TTTTTGGGGTAAATGCTTTGATTTC20.15267175572519084No Hit
CCCACCCCCATGAAACCATCAGAGG20.15267175572519084No Hit
ACGACACACCGGTGACTTGGGATGG20.15267175572519084No Hit
CCTGAAATTGTGGTTGTGAAGAGCT20.15267175572519084No Hit
GCTATATAGAGGAATTGTGGAACCA20.15267175572519084No Hit
GCGTAGCACAATCGCGGGGAGGGGT20.15267175572519084No Hit
GTTCTTGGGGAAGAAGTACATGGGA20.15267175572519084No Hit
TTCTATTTCTATATGTGTCTCTTAT20.15267175572519084No Hit
GTACATGGAAGCAGTGGTATCAACG20.15267175572519084No Hit
GTTCTGAGGTAATTTCCCTGGAGTT20.15267175572519084No Hit
GGGCTGGGCGAACCTCTTCTGGGTT20.15267175572519084No Hit
ACGTCCTACAGTGGACATTTCTAAA20.15267175572519084No Hit
GTTCCGGTCCATGCTATATCTCACG20.15267175572519084No Hit
CCACAACCCCAAGTGAGCATCTGAT20.15267175572519084No Hit
GGTATCAACGCAGAGTACTTTTTTT20.15267175572519084No Hit
CCCAATAGGCCCAGGATCGGGATCC20.15267175572519084No Hit
GTACTTTTTTTTTTTTTTTTTTTTT20.15267175572519084No Hit
ATTGTACATGTCAGCTTAAAGGAGG20.15267175572519084No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)