##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062381_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 954688 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.246725631829456 32.0 32.0 32.0 32.0 32.0 2 31.378712207548435 32.0 32.0 32.0 32.0 32.0 3 31.49708386404773 32.0 32.0 32.0 32.0 32.0 4 31.60776400248039 32.0 32.0 32.0 32.0 32.0 5 31.536621388348863 32.0 32.0 32.0 32.0 32.0 6 35.14883082221626 36.0 36.0 36.0 36.0 36.0 7 35.153380999865924 36.0 36.0 36.0 36.0 36.0 8 35.10012485754508 36.0 36.0 36.0 36.0 36.0 9 35.233552741838174 36.0 36.0 36.0 36.0 36.0 10 35.101765184018234 36.0 36.0 36.0 36.0 36.0 11 35.23039673694443 36.0 36.0 36.0 36.0 36.0 12 35.14895337534357 36.0 36.0 36.0 36.0 36.0 13 35.18878523664276 36.0 36.0 36.0 36.0 36.0 14 35.15122741670577 36.0 36.0 36.0 36.0 36.0 15 35.11037113695783 36.0 36.0 36.0 36.0 36.0 16 35.13033053730643 36.0 36.0 36.0 36.0 36.0 17 35.10828040155527 36.0 36.0 36.0 36.0 36.0 18 35.11511719011866 36.0 36.0 36.0 36.0 36.0 19 35.09942934236106 36.0 36.0 36.0 36.0 36.0 20 35.074766834819336 36.0 36.0 36.0 36.0 36.0 21 35.05444710732721 36.0 36.0 36.0 36.0 36.0 22 35.036955528926725 36.0 36.0 36.0 36.0 36.0 23 34.984077520614065 36.0 36.0 36.0 36.0 36.0 24 34.976768326406116 36.0 36.0 36.0 36.0 36.0 25 34.94641495441443 36.0 36.0 36.0 32.0 36.0 26 34.90255140946571 36.0 36.0 36.0 32.0 36.0 27 34.87182933062948 36.0 36.0 36.0 32.0 36.0 28 34.82807681671918 36.0 36.0 36.0 32.0 36.0 29 34.8096655661326 36.0 36.0 36.0 32.0 36.0 30 34.78892475866461 36.0 36.0 36.0 32.0 36.0 31 34.76769478615003 36.0 36.0 36.0 32.0 36.0 32 34.73819404873634 36.0 36.0 36.0 32.0 36.0 33 34.703851939062815 36.0 36.0 36.0 32.0 36.0 34 34.68997096433599 36.0 36.0 36.0 32.0 36.0 35 34.644802280954615 36.0 36.0 36.0 32.0 36.0 36 34.591968266072264 36.0 36.0 36.0 32.0 36.0 37 34.55276383488637 36.0 36.0 36.0 32.0 36.0 38 34.47846940571161 36.0 36.0 36.0 32.0 36.0 39 34.38837400281558 36.0 36.0 36.0 32.0 36.0 40 34.339245910705905 36.0 36.0 36.0 32.0 36.0 41 34.34403071998391 36.0 36.0 36.0 32.0 36.0 42 34.24691103271435 36.0 36.0 36.0 32.0 36.0 43 34.236385080780316 36.0 36.0 36.0 32.0 36.0 44 34.22049821512368 36.0 36.0 36.0 32.0 36.0 45 34.095963288529866 36.0 36.0 36.0 32.0 36.0 46 34.128101536837164 36.0 36.0 36.0 32.0 36.0 47 34.09060970704565 36.0 36.0 36.0 32.0 36.0 48 34.04674930448481 36.0 36.0 36.0 32.0 36.0 49 34.056406909901455 36.0 36.0 36.0 32.0 36.0 50 33.494726025675405 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 4.0 21 19.0 22 80.0 23 228.0 24 580.0 25 1438.0 26 3079.0 27 5617.0 28 9900.0 29 15712.0 30 23642.0 31 35609.0 32 53716.0 33 84065.0 34 172375.0 35 548622.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.42479563433238 17.71273881947202 11.994376342925747 25.86808920326985 2 14.678289798962549 20.61063344814005 38.867100753366685 25.843975999530716 3 19.250199804961028 24.695788436137306 28.533195905229075 27.520815853672588 4 11.979411074612859 16.098138868405176 36.273526010591944 35.64892404639002 5 13.420824394985587 37.64496882751223 34.14131108802038 14.7928956894818 6 34.11977651103304 35.129331565197894 17.267288028005254 13.483603895763807 7 29.409189180130053 30.642262184085272 21.184722129114434 18.76382650667024 8 27.32358634443923 35.09209291412482 19.76844791177851 17.815872829657437 9 27.08078450760877 14.672018502379835 18.45000670376081 39.79719028625059 10 15.392987028222832 27.80039133203727 32.937776530133405 23.86884510960649 11 37.072111517061074 20.909134712073474 22.54380488704163 19.474948883823824 12 24.245617416370585 23.657886136622643 30.34593500703895 21.75056143996782 13 30.79435375745793 20.062575417309112 25.1892764966146 23.953794328618354 14 22.933984715425353 20.438090768921366 25.298841087350006 31.329083428303278 15 24.70042568881142 28.929451297177717 23.107235033853993 23.26288798015687 16 24.657374974860897 25.776274552523965 26.456287289669504 23.110063182945634 17 23.114881511027686 26.774401689347727 27.027573406180867 23.083143393443724 18 24.221525775960316 24.59714587383522 29.194354595428035 21.98697375477643 19 25.04388868405175 26.400143292887314 25.339273144734197 23.21669487832674 20 24.732373298920695 24.990468090098545 27.47085958972984 22.806299021250922 21 24.999895253737346 25.60658560702554 24.240380103237914 25.153139035999196 22 24.26614768385064 26.78602852450225 25.252229000469264 23.69559479117785 23 22.731824428504392 26.135868472212913 25.91799624589395 25.21431085338875 24 23.849257558490315 26.6610662331568 26.019600120667697 23.47007608768519 25 24.636425722330227 25.376772306764096 25.654873634108732 24.331928336796942 26 22.35044328618355 26.543540926459748 26.94985167929208 24.156164108064623 27 24.334861232151237 26.618015519206274 25.98251994368841 23.06460330495408 28 23.3077193805725 25.78643494000134 25.89599953073674 25.009846148689412 29 23.25387980156868 26.07197325199437 26.3637963397466 24.310350606690353 30 23.923941643762152 25.755220553730645 26.72548518468861 23.595352617818595 31 23.819614366159417 25.391751022323522 25.815973386069587 24.972661225447474 32 23.181709626600522 26.691023664275658 25.940830931152377 24.18643577797144 33 22.74586042769994 26.04222531340082 26.887632399275997 24.324281859623248 34 23.133526345779984 26.85914141583428 27.23738017027553 22.76995206811021 35 24.306370248709527 26.370814339344374 26.512326540189047 22.810488871757055 36 22.951896326339078 26.9174850841322 26.54553110545016 23.585087484078567 37 24.186016792920828 26.539770061004226 25.71635969028625 23.557853455788695 38 23.667837031574713 26.89685007038949 25.175240497419054 24.260072400616746 39 24.338841590132066 25.707142019172757 25.990061674599453 23.963954716095728 40 25.46015033183616 25.858081383656227 25.453132332238386 23.228635952269222 41 23.37748039149963 25.698971810685794 27.253511094724143 23.67003670309043 42 25.305230609371858 26.934139739894082 25.947639438224847 21.812990212509217 43 23.757604578668634 25.619259904806597 26.157655694844806 24.46547982167996 44 23.100426526781526 26.32493547630221 26.993426124555874 23.581211872360395 45 23.872511228799357 26.467704632298723 25.972988033786955 23.68679610511497 46 23.10107920187454 25.5226058383533 27.000053420649913 24.376261539122247 47 24.94458922705638 25.042736475162563 26.83599249178789 23.176681805993162 48 23.60917912448884 27.4601754709392 25.11134527720051 23.819300127371456 49 23.466409968492325 25.719292585640545 27.170656800965343 23.64364064490179 50 22.907379164711404 28.118610477978145 24.599136052825635 24.374874304484816 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 13.0 1 14.5 2 16.0 3 79.0 4 142.0 5 163.0 6 184.0 7 164.5 8 145.0 9 198.0 10 251.0 11 373.0 12 495.0 13 832.5 14 1170.0 15 1586.0 16 2002.0 17 2372.5 18 2743.0 19 3007.0 20 3271.0 21 3862.5 22 4454.0 23 5279.5 24 6105.0 25 6797.5 26 7490.0 27 9754.5 28 12019.0 29 14471.0 30 16923.0 31 19828.0 32 22733.0 33 27396.5 34 32060.0 35 37489.0 36 42918.0 37 45511.5 38 48105.0 39 47650.0 40 47195.0 41 47844.0 42 48493.0 43 49524.5 44 50556.0 45 59072.0 46 67588.0 47 74595.0 48 81602.0 49 79076.0 50 76550.0 51 69319.5 52 62089.0 53 59602.5 54 57116.0 55 56950.0 56 56784.0 57 54267.0 58 51750.0 59 47283.5 60 42817.0 61 37766.5 62 32716.0 63 28068.5 64 23421.0 65 20063.0 66 16705.0 67 14338.5 68 11972.0 69 10601.5 70 9231.0 71 7251.0 72 5271.0 73 4656.0 74 4041.0 75 2953.5 76 1866.0 77 1610.0 78 1354.0 79 1155.0 80 956.0 81 767.0 82 578.0 83 477.0 84 376.0 85 309.5 86 243.0 87 179.0 88 115.0 89 73.5 90 32.0 91 21.5 92 11.0 93 11.0 94 11.0 95 7.5 96 4.0 97 5.0 98 6.0 99 3.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015607193135348932 2 0.004189850506133941 3 7.332238385734397E-4 4 0.0 5 0.0 6 0.0010474626265334853 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.0474626265334854E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 954688.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.70254558271859 #Duplication Level Percentage of deduplicated Percentage of total 1 80.3455924897053 47.968363979871626 2 12.604514567519004 15.050432110306877 3 3.3480967977300664 5.996697050455004 4 1.3257219103388425 3.1659589112805406 5 0.6401878590940613 1.9110422419533108 6 0.37562816734394155 1.345557466980283 7 0.24537608279226417 1.0254703737469857 8 0.1698766575832552 0.8113655114243338 9 0.12452704761892451 0.6691123563075189 >10 0.6774786828447643 7.55484669525903 >50 0.07194517930019399 2.9971699822287525 >100 0.06435462478327429 7.535005430569044 >500 0.00511310702731653 2.012436528144614 >1k 0.0014105122833976637 1.4079055635492317 >5k 1.7631403542470796E-4 0.5486357979228856 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 5212 0.5459375209492525 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 3926 0.4112338271770463 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 1824 0.19105718307970773 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 1819 0.19053345176644096 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 1515 0.15869058791982302 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 1115 0.11679208285848362 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 1104 0.11563987396929679 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 1069 0.11197375477642957 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 1003 0.10506050144130857 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0474626265334852E-4 2 0.0 0.0 0.0 0.0 1.0474626265334852E-4 3 0.0 0.0 0.0 0.0 1.0474626265334852E-4 4 0.0 0.0 0.0 0.0 1.0474626265334852E-4 5 0.0 0.0 0.0 0.0 1.0474626265334852E-4 6 0.0 0.0 0.0 0.0 1.0474626265334852E-4 7 0.0 0.0 0.0 0.0 1.0474626265334852E-4 8 0.0 0.0 0.0 0.0 1.0474626265334852E-4 9 0.0 0.0 0.0 1.0474626265334852E-4 1.0474626265334852E-4 10 0.0 0.0 0.0 3.1423878796004557E-4 1.0474626265334852E-4 11 0.0 0.0 0.0 4.189850506133941E-4 1.0474626265334852E-4 12 0.0 0.0 0.0 4.189850506133941E-4 2.0949252530669705E-4 13 0.0 0.0 0.0 4.189850506133941E-4 5.237313132667427E-4 14 0.0 0.0 0.0 4.189850506133941E-4 5.237313132667427E-4 15 0.0 0.0 0.0 5.237313132667427E-4 6.284775759200911E-4 16 0.0 0.0 0.0 5.237313132667427E-4 6.284775759200911E-4 17 0.0 0.0 0.0 6.284775759200911E-4 6.284775759200911E-4 18 0.0 0.0 0.0 6.284775759200911E-4 7.332238385734397E-4 19 0.0 0.0 0.0 6.284775759200911E-4 7.332238385734397E-4 20 0.0 0.0 0.0 6.284775759200911E-4 7.332238385734397E-4 21 0.0 0.0 0.0 0.0010474626265334853 7.332238385734397E-4 22 0.0 0.0 0.0 0.001780686465106925 7.332238385734397E-4 23 0.0 0.0 0.0 0.0028281490916404104 7.332238385734397E-4 24 0.0 0.0 0.0 0.004294596768787289 7.332238385734397E-4 25 0.0 0.0 0.0 0.005342059395320775 8.379701012267882E-4 26 0.0 0.0 0.0 0.0071227458604277 8.379701012267882E-4 27 0.0 0.0 0.0 0.00848444727492123 8.379701012267882E-4 28 0.0 0.0 0.0 0.012255312730441777 8.379701012267882E-4 29 0.0 0.0 0.0 0.01696889454984246 8.379701012267882E-4 30 0.0 0.0 0.0 0.02566283435007039 8.379701012267882E-4 31 0.0 0.0 0.0 0.045250385466246566 8.379701012267882E-4 32 0.0 0.0 0.0 0.07248441375611718 8.379701012267882E-4 33 0.0 0.0 0.0 0.09846148689414762 8.379701012267882E-4 34 0.0 0.0 0.0 0.1314565596299524 8.379701012267882E-4 35 0.0 0.0 0.0 0.16968894549842461 8.379701012267882E-4 36 0.0 0.0 0.0 0.2238427632902058 8.379701012267882E-4 37 0.0 0.0 0.0 0.30784926593819134 8.379701012267882E-4 38 0.0 0.0 0.0 0.41133857343969965 9.427163638801368E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACCGT 170 0.0 24.588118 6 CGTCGTA 165 0.0 22.66656 10 CCGTCGT 180 0.0 21.999895 9 ACGTGTA 50 0.0025801153 21.999895 8 TCGTATC 50 0.0025801153 21.999895 44 TACCGTC 180 0.0 21.999895 7 CGTAAAT 60 2.872258E-4 21.999893 3 GTCGTAG 175 0.0 21.371326 11 ACCGTCG 175 0.0 21.371326 8 GTCCTAC 970 0.0 20.415482 1 TCCTACA 1020 0.0 20.275475 2 TATAGGA 145 2.9467628E-10 19.725077 2 CGACGGT 135 2.5956979E-9 19.555462 7 GACGGTA 135 2.5956979E-9 19.555462 8 GTATAGT 80 8.975537E-5 19.252934 1 GTAGGAC 1220 0.0 18.934338 3 GATATAC 430 0.0 18.933117 1 CATAAGG 70 8.121874E-4 18.857054 3 CTAGGAC 175 9.094947E-12 18.857054 3 ACGACGG 140 4.0781742E-9 18.857054 6 >>END_MODULE