##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062379_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2617114 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.233144219166608 32.0 32.0 32.0 32.0 32.0 2 31.21545221186391 32.0 32.0 32.0 32.0 32.0 3 31.376563267782757 32.0 32.0 32.0 32.0 32.0 4 31.52854862264311 32.0 32.0 32.0 32.0 32.0 5 31.41360636181687 32.0 32.0 32.0 32.0 32.0 6 35.01361499728327 36.0 36.0 36.0 36.0 36.0 7 35.04946364583277 36.0 36.0 36.0 36.0 36.0 8 34.96489530070146 36.0 36.0 36.0 36.0 36.0 9 35.15388057226395 36.0 36.0 36.0 36.0 36.0 10 34.97230269678738 36.0 36.0 36.0 36.0 36.0 11 35.148109711690054 36.0 36.0 36.0 36.0 36.0 12 35.05719162405612 36.0 36.0 36.0 36.0 36.0 13 35.103661896272 36.0 36.0 36.0 36.0 36.0 14 35.06002757235642 36.0 36.0 36.0 36.0 36.0 15 35.00527718700828 36.0 36.0 36.0 36.0 36.0 16 35.02681579785978 36.0 36.0 36.0 36.0 36.0 17 34.99475796621775 36.0 36.0 36.0 36.0 36.0 18 35.00892624471078 36.0 36.0 36.0 36.0 36.0 19 35.00061327095419 36.0 36.0 36.0 36.0 36.0 20 34.99370642623898 36.0 36.0 36.0 36.0 36.0 21 34.990847551921696 36.0 36.0 36.0 36.0 36.0 22 34.97244292759123 36.0 36.0 36.0 32.0 36.0 23 34.92880707527452 36.0 36.0 36.0 32.0 36.0 24 34.91082276125534 36.0 36.0 36.0 32.0 36.0 25 34.87224515248476 36.0 36.0 36.0 32.0 36.0 26 34.82933911170855 36.0 36.0 36.0 32.0 36.0 27 34.81023409755937 36.0 36.0 36.0 32.0 36.0 28 34.79291043492947 36.0 36.0 36.0 32.0 36.0 29 34.77503769419292 36.0 36.0 36.0 32.0 36.0 30 34.76008802062119 36.0 36.0 36.0 32.0 36.0 31 34.75372910771178 36.0 36.0 36.0 32.0 36.0 32 34.7103102883558 36.0 36.0 36.0 32.0 36.0 33 34.6993906264687 36.0 36.0 36.0 32.0 36.0 34 34.68455596508215 36.0 36.0 36.0 32.0 36.0 35 34.67235932404932 36.0 36.0 36.0 32.0 36.0 36 34.63372057923346 36.0 36.0 36.0 32.0 36.0 37 34.626968867233145 36.0 36.0 36.0 32.0 36.0 38 34.59940491701928 36.0 36.0 36.0 32.0 36.0 39 34.59383886219706 36.0 36.0 36.0 32.0 36.0 40 34.592729242975274 36.0 36.0 36.0 32.0 36.0 41 34.55491201376784 36.0 36.0 36.0 32.0 36.0 42 34.540703232644816 36.0 36.0 36.0 32.0 36.0 43 34.52294282939146 36.0 36.0 36.0 32.0 36.0 44 34.493326618557695 36.0 36.0 36.0 32.0 36.0 45 34.457522675741295 36.0 36.0 36.0 32.0 36.0 46 34.45259511049194 36.0 36.0 36.0 32.0 36.0 47 34.4355977615037 36.0 36.0 36.0 32.0 36.0 48 34.39912361479095 36.0 36.0 36.0 32.0 36.0 49 34.374384914069466 36.0 36.0 36.0 32.0 36.0 50 33.837561527698064 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 12.0 21 56.0 22 202.0 23 610.0 24 1476.0 25 3540.0 26 7531.0 27 13864.0 28 24370.0 29 39047.0 30 59227.0 31 88717.0 32 138422.0 33 240254.0 34 534822.0 35 1464961.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.84992364568541 18.198580833920577 11.708616955090822 26.24287856530319 2 16.866646720246877 20.076491845085865 36.99671113342664 26.060150301240615 3 18.941865739023047 24.162153714592925 28.20919515019887 28.68678539618516 4 12.754048925648634 15.857276373898882 36.225705108757204 35.16296959169528 5 14.956666006906843 36.22887654110596 33.05946932384298 15.754988128144207 6 33.72037662975821 35.9462322122222 16.688204451787588 13.645186706231998 7 30.301148747168632 30.072652603327636 20.677105144907824 18.949093504595908 8 28.054910867466987 32.967383155643965 19.158966709130745 19.8187392677583 9 27.761419640107388 13.932751878596042 18.3995041866728 39.90632429462377 10 16.369711063408012 26.57048947810451 30.69594981342043 26.363849645067045 11 37.86770465482206 21.253220150134844 21.859727929314506 19.019347265728584 12 24.71405525322932 23.490952247399235 28.885291202446666 22.90970129692478 13 29.448048499224715 20.046776716642835 25.14258072059528 25.362594063537163 14 23.530423206631426 19.692837224515248 24.782221943713573 31.99451762513975 15 26.152815658775275 26.83688979540058 21.605210930819215 25.405083615004926 16 26.090342262507484 25.91786219476874 23.47436909511775 24.517426447606027 17 24.132001892160602 25.45124132918933 25.08304949650646 25.333707282143614 18 24.770415044969383 25.496176322468184 25.847708582812977 23.885700049749456 19 26.29312288268681 24.576346311242077 24.730485565397608 24.400045240673503 20 26.280933883659635 24.337648264462306 24.578753543024874 24.80266430885319 21 27.10760784589437 23.811343334680874 24.206587867398973 24.874460952025782 22 25.96363780867016 24.525030243237396 24.785202325920842 24.726129622171598 23 24.973501345375094 24.503403367220532 25.12897795052107 25.394117336883298 24 25.153470578660308 24.979997050185816 24.559228218564417 25.307304152589456 25 25.267298252961083 24.56709948439388 24.499582364390697 25.666019898254337 26 24.771905236073017 25.123590336531006 25.115948330871333 24.988556096524643 27 25.69341648854425 24.72559468177542 24.65093228648045 24.93005654319988 28 24.739579552132614 24.968381201583117 25.215332614475333 25.076706631808932 29 24.988976406835928 24.528278095642758 24.743973705386928 25.73877179213439 30 24.757882155687525 25.027186435134276 25.219803187786237 24.99512822139196 31 25.58184320591308 24.472644294440364 24.365083064780517 25.58042943486604 32 25.07995448421429 24.794219892599255 24.46672174005412 25.659103883132335 33 25.026078344313625 24.337953944688692 24.967005640564377 25.66896207043331 34 25.115222340333666 24.403751613418446 25.428162472097128 25.052863574150763 35 25.599572659043513 24.213007152153097 25.097378257118336 25.090041931685054 36 25.142809980765072 24.81997345167234 24.58249812579811 25.454718441764477 37 25.70594937782611 24.76934516417703 24.164251156044404 25.360454301952455 38 25.06520541329113 24.690556085825836 24.942054492085557 25.30218400879748 39 25.82845072855061 23.768509892958427 24.75451967319727 25.648519705293694 40 25.635566505700552 24.47321744486484 24.9133205508052 24.977895498629408 41 25.13226401295473 24.770835355280667 25.440351471124302 24.65654916064031 42 25.760513298236148 25.294236322911424 24.666178087771492 24.27907229108094 43 25.087061549477784 24.228978943981804 25.121526995002892 25.56243251153752 44 24.816343498983993 24.217133835209317 25.255032833877316 25.71148983192937 45 25.342151698397547 24.52930976640681 24.93544415718994 25.193094378005696 46 25.308508004242846 24.165606974405378 24.770701444951534 25.75518357640025 47 24.777254640034787 24.31972776119038 25.302451478995565 25.600566119779266 48 25.04480125817981 24.863074363592872 24.803619559560648 25.288504818666667 49 24.792844331580515 24.604086791786678 25.30184011854279 25.301228758090016 50 24.723473813883395 25.049864125035537 24.91142908671849 25.31523297436258 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 9.0 1 13.5 2 18.0 3 51.0 4 84.0 5 119.0 6 154.0 7 160.0 8 166.0 9 237.0 10 308.0 11 463.0 12 618.0 13 1105.0 14 1592.0 15 2261.5 16 2931.0 17 3378.0 18 3825.0 19 4422.5 20 5020.0 21 5937.5 22 6855.0 23 7985.0 24 9115.0 25 11333.5 26 13552.0 27 17680.5 28 21809.0 29 26543.5 30 31278.0 31 35882.5 32 40487.0 33 48484.0 34 56481.0 35 65094.5 36 73708.0 37 87043.0 38 100378.0 39 108993.0 40 117608.0 41 128237.0 42 138866.0 43 142990.5 44 147115.0 45 158772.0 46 170429.0 47 179948.5 48 189468.0 49 196900.5 50 204333.0 51 201029.0 52 197725.0 53 190423.5 54 183122.0 55 182314.5 56 181507.0 57 173261.0 58 165015.0 59 151327.5 60 137640.0 61 123848.5 62 110057.0 63 98299.0 64 86541.0 65 73759.5 66 60978.0 67 54589.0 68 48200.0 69 43008.5 70 37817.0 71 31212.0 72 24607.0 73 22151.5 74 19696.0 75 15038.0 76 10380.0 77 8830.0 78 7280.0 79 5832.0 80 4384.0 81 3502.5 82 2621.0 83 2170.5 84 1720.0 85 1324.5 86 929.0 87 693.5 88 458.0 89 294.0 90 130.0 91 89.5 92 49.0 93 31.5 94 14.0 95 16.0 96 18.0 97 14.5 98 11.0 99 9.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.013984870357194987 2 0.003935632914729736 3 6.495704810718983E-4 4 0.0 5 0.0 6 3.0568022638677566E-4 7 7.642005659669391E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 7.642005659669391E-5 47 0.0 48 0.0 49 0.0 50 7.642005659669391E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2617114.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.54795917215727 #Duplication Level Percentage of deduplicated Percentage of total 1 80.53899301421768 44.73776695720423 2 12.313061509273659 13.679308760027887 3 3.2883561287012695 5.479844159418336 4 1.2293911513297555 2.731606779227067 5 0.6277738593934791 1.7435778355468285 6 0.36642512692206997 1.2212500793951813 7 0.24634465729887178 0.9578760076141761 8 0.18026279761947472 0.8010584417940343 9 0.13390849963551815 0.6694509483502737 >10 0.8660038875266689 9.254660583879652 >50 0.10898034198949061 4.24172191767394 >100 0.09096398343629453 10.25628956777922 >500 0.007738585343960591 2.896276181869455 >1k 0.0017964573119885422 1.3293117802198413 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 3.821002829834696E-5 6 0.0 0.0 0.0 0.0 3.821002829834696E-5 7 0.0 0.0 0.0 3.821002829834696E-5 3.821002829834696E-5 8 0.0 0.0 0.0 3.821002829834696E-5 3.821002829834696E-5 9 0.0 0.0 0.0 3.821002829834696E-5 3.821002829834696E-5 10 0.0 0.0 0.0 3.821002829834696E-5 3.821002829834696E-5 11 0.0 0.0 0.0 3.821002829834696E-5 3.821002829834696E-5 12 0.0 0.0 0.0 3.821002829834696E-5 7.642005659669391E-5 13 0.0 0.0 0.0 3.821002829834696E-5 1.5284011319338783E-4 14 0.0 0.0 0.0 3.821002829834696E-5 1.910501414917348E-4 15 0.0 0.0 0.0 1.1463008489504087E-4 1.910501414917348E-4 16 0.0 0.0 0.0 1.1463008489504087E-4 1.910501414917348E-4 17 0.0 0.0 0.0 1.1463008489504087E-4 1.910501414917348E-4 18 0.0 0.0 0.0 1.910501414917348E-4 1.910501414917348E-4 19 0.0 0.0 0.0 2.2926016979008174E-4 1.910501414917348E-4 20 0.0 0.0 0.0 3.438902546851226E-4 1.910501414917348E-4 21 0.0 0.0 0.0 3.821002829834696E-4 1.910501414917348E-4 22 0.0 0.0 0.0 4.967303678785104E-4 1.910501414917348E-4 23 0.0 0.0 0.0 9.552507074586739E-4 1.910501414917348E-4 24 0.0 0.0 0.0 0.0016048211885305722 1.910501414917348E-4 25 0.0 0.0 0.0 0.001795871330022307 1.910501414917348E-4 26 0.0 0.0 0.0 0.0021779716130057767 1.910501414917348E-4 27 0.0 0.0 0.0 0.0029039621506743688 1.910501414917348E-4 28 0.0 0.0 0.0 0.0055404541032603085 1.910501414917348E-4 29 0.0 0.0 0.0 0.0106605978952388 1.910501414917348E-4 30 0.0 0.0 0.0 0.020748045366002398 1.910501414917348E-4 31 0.0 0.0 0.0 0.04676907463717667 1.910501414917348E-4 32 0.0 0.0 0.0 0.0811198900773906 1.910501414917348E-4 33 0.0 0.0 0.0 0.12039979916809126 1.910501414917348E-4 34 0.0 0.0 0.0 0.16709245374867124 1.910501414917348E-4 35 0.0 0.0 0.0 0.21527529943288676 1.910501414917348E-4 36 0.0 0.0 0.0 0.28290704952096085 1.910501414917348E-4 37 0.0 0.0 0.0 0.3863415961245861 1.910501414917348E-4 38 0.0 0.0 0.0 0.5299730924980723 1.910501414917348E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3965 0.0 24.52915 1 GGACCGT 325 0.0 18.953749 6 AACGCGT 70 8.127064E-4 18.857044 6 TTAGGAC 765 0.0 18.692713 3 ACCGTTA 220 0.0 17.999907 8 CCGTTTA 245 0.0 17.959091 27 CGCAATA 490 0.0 17.510115 36 TAGGACG 705 0.0 17.475088 4 ATACGAA 535 0.0 17.270937 40 GGTATCA 1930 0.0 17.101625 1 TAGGACC 1290 0.0 17.054174 4 ATCAACG 5735 0.0 16.763645 3 CTAGCGG 540 0.0 16.703617 29 AACGCAG 5770 0.0 16.700087 6 GTCCTAC 995 0.0 16.585997 1 TTATTCG 315 0.0 16.063408 22 TATCAAC 6150 0.0 16.062319 2 TCAACGC 6065 0.0 15.887797 4 CAACGCA 6105 0.0 15.747665 5 CCGTTAT 240 3.6379788E-12 15.583253 9 >>END_MODULE