##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062377_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 949083 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.064229366662346 32.0 32.0 32.0 32.0 32.0 2 31.403739188248025 32.0 32.0 32.0 32.0 32.0 3 31.50246606461184 32.0 32.0 32.0 32.0 32.0 4 31.61116256428574 32.0 32.0 32.0 32.0 32.0 5 31.561237531385558 32.0 32.0 32.0 32.0 32.0 6 35.14385675436184 36.0 36.0 36.0 36.0 36.0 7 35.158007255424444 36.0 36.0 36.0 36.0 36.0 8 35.112760422428806 36.0 36.0 36.0 36.0 36.0 9 35.206460341192496 36.0 36.0 36.0 36.0 36.0 10 35.11585077385224 36.0 36.0 36.0 36.0 36.0 11 35.21634356531515 36.0 36.0 36.0 36.0 36.0 12 35.12560439919375 36.0 36.0 36.0 36.0 36.0 13 35.14841589197152 36.0 36.0 36.0 36.0 36.0 14 35.098996610412364 36.0 36.0 36.0 36.0 36.0 15 35.07304945932021 36.0 36.0 36.0 36.0 36.0 16 35.05685382627231 36.0 36.0 36.0 36.0 36.0 17 35.04670613634424 36.0 36.0 36.0 36.0 36.0 18 35.025262279484515 36.0 36.0 36.0 36.0 36.0 19 35.00148142996977 36.0 36.0 36.0 36.0 36.0 20 34.97752356748567 36.0 36.0 36.0 36.0 36.0 21 34.92599488137497 36.0 36.0 36.0 32.0 36.0 22 34.89127189086729 36.0 36.0 36.0 32.0 36.0 23 34.79070429035185 36.0 36.0 36.0 32.0 36.0 24 34.76403222900421 36.0 36.0 36.0 32.0 36.0 25 34.72322125672886 36.0 36.0 36.0 32.0 36.0 26 34.641196818402605 36.0 36.0 36.0 32.0 36.0 27 34.58927933594849 36.0 36.0 36.0 32.0 36.0 28 34.52695180505815 36.0 36.0 36.0 32.0 36.0 29 34.46867871408507 36.0 36.0 36.0 32.0 36.0 30 34.433425738317936 36.0 36.0 36.0 32.0 36.0 31 34.40225670462963 36.0 36.0 36.0 32.0 36.0 32 34.337035854609134 36.0 36.0 36.0 32.0 36.0 33 34.2747241284482 36.0 36.0 36.0 32.0 36.0 34 34.219779513488284 36.0 36.0 36.0 32.0 36.0 35 34.09471985063477 36.0 36.0 36.0 32.0 36.0 36 34.0591434047391 36.0 36.0 36.0 32.0 36.0 37 33.94772006241814 36.0 36.0 36.0 32.0 36.0 38 33.85988053731865 36.0 36.0 36.0 32.0 36.0 39 33.64548306101785 36.0 36.0 36.0 27.0 36.0 40 33.4864590346682 36.0 36.0 36.0 21.0 36.0 41 33.517147604582526 36.0 36.0 36.0 21.0 36.0 42 33.262955926931575 36.0 36.0 36.0 14.0 36.0 43 33.332892908207185 36.0 36.0 36.0 14.0 36.0 44 33.33132297175273 36.0 36.0 36.0 14.0 36.0 45 33.045644058528076 36.0 36.0 36.0 14.0 36.0 46 33.23741443056087 36.0 36.0 36.0 14.0 36.0 47 33.07331076417974 36.0 36.0 36.0 14.0 36.0 48 33.11635547154464 36.0 36.0 36.0 14.0 36.0 49 33.17920245120817 36.0 36.0 36.0 14.0 36.0 50 32.56156943070311 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 3.0 20 9.0 21 35.0 22 160.0 23 502.0 24 1362.0 25 3284.0 26 6979.0 27 13286.0 28 21039.0 29 27259.0 30 34596.0 31 44190.0 32 61409.0 33 73857.0 34 144613.0 35 516498.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.82746628784845 17.369925262088532 12.619241323784191 25.183367126278828 2 14.405805439385652 21.61086823435447 36.36692197702733 27.616404349232543 3 18.934757870780125 26.560880010115056 27.70746407046824 26.796898048636574 4 12.416827611494464 17.04297727385276 34.37296843374078 36.167226680911995 5 13.572680155476391 37.355004778296525 33.556285382837956 15.516029683389124 6 34.00363511840476 33.468271738271476 17.993941469325396 14.534151673998366 7 28.75241549202282 30.956018552664577 22.065848893983873 18.225717061328737 8 29.163729621118488 31.48144050625709 20.834637223509432 18.52019264911499 9 27.405611521858468 15.580302249645184 18.407452246010095 38.60663398248626 10 15.898714864769467 27.557442289030572 31.990879617483404 24.552963228716564 11 36.043844426672905 21.836446338202244 20.824627561551516 21.295081673573332 12 23.60657603181176 24.594266254900784 29.15098047272999 22.648177240557466 13 30.97695354357838 20.127744359555486 24.848195574043576 24.047106522822556 14 25.06440427233445 19.124670866510094 24.976635341692983 30.83428951946247 15 26.477347081340618 25.069040326293905 25.454675723830267 22.998936868535207 16 26.15356085821788 25.162604324384695 25.25932926835693 23.424505549040493 17 24.135507642640317 24.67697767213194 27.64257709810417 23.54493758712357 18 26.116788521130395 22.71329272571524 28.717509427521094 22.45240932563327 19 24.01876337475226 28.35642404299729 25.7954256898501 21.82938689240035 20 24.099894319042697 22.821291709997965 29.793495405565164 23.285318565394174 21 25.17956806728179 25.88066586378641 24.06607219811123 24.87369387082057 22 23.659890652345474 25.88424826911872 25.242576255185266 25.21328482335054 23 22.668828753649574 24.966520314872355 25.289674348818806 27.07497658265926 24 22.634058348953673 27.63520155771413 25.350891334056136 24.37984875927606 25 25.46795169653234 23.773684704077514 24.48826920300964 26.270094396380507 26 22.845525628422383 24.438747717533662 26.462701365423257 26.2530252886207 27 26.078330346239476 25.664773260083678 25.59839339657332 22.65850299710352 28 24.542005282994218 22.994090084850324 26.516121350819688 25.947783281335774 29 22.98292140940255 26.087602454158382 28.026842752425235 22.902633384013832 30 25.95062813262907 24.054482063212596 27.214901120344585 22.779988683813745 31 22.87070783061123 24.893923924461824 26.12922157493075 26.106146669996193 32 22.83836081775777 25.836201891720744 26.288743977081037 25.036693313440445 33 22.81813076411652 25.019729570543358 26.34047812467403 25.821661540666096 34 22.504248838088976 26.275257274653534 27.826544148404302 23.393949738853188 35 25.548871911097343 24.981903584828725 26.42571829861034 23.04350620546359 36 24.146149493774516 25.990034591284427 26.303178963272973 23.560636951668084 37 25.44329631865706 25.76033919056605 26.378198745525943 22.418165745250942 38 23.983044686291926 25.677522408472175 25.041013272811757 25.298419632424142 39 23.44283903515288 25.689007178508096 26.589982119582796 24.278171666756226 40 24.64737014570907 25.66182304392767 25.19589962100259 24.494907189360678 41 22.29151718026769 25.878347836806686 26.849074316998617 24.981060665927004 42 25.911327038836436 25.70702457003234 25.99224725340144 22.389401137729788 43 24.73145130615552 23.700034665039833 25.170612053951025 26.39790197485362 44 24.217586870695186 24.662542685940007 27.69062347550214 23.429246967862664 45 24.99433663862908 25.019097381367068 25.96242899725314 24.02413698275072 46 23.42294310899631 24.82114220327518 27.710999517426387 24.044915170302126 47 24.67481700718906 24.14735939292853 27.819859421903924 23.357964177978484 48 23.653990220033442 28.714137751914215 24.36551913794684 23.2663528901055 49 22.531538337532123 25.461629804769448 28.620995213274288 23.385836644424142 50 22.58195032879175 28.613469240243983 23.830842678338307 24.97373775262596 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 44.0 1 50.5 2 57.0 3 219.0 4 381.0 5 408.0 6 435.0 7 402.0 8 369.0 9 483.0 10 597.0 11 924.0 12 1251.0 13 2071.5 14 2892.0 15 3799.5 16 4707.0 17 5387.0 18 6067.0 19 6403.5 20 6740.0 21 7180.5 22 7621.0 23 7570.0 24 7519.0 25 7340.5 26 7162.0 27 7965.0 28 8768.0 29 10064.5 30 11361.0 31 12403.5 32 13446.0 33 15465.0 34 17484.0 35 19607.5 36 21731.0 37 25980.0 38 30229.0 39 33170.0 40 36111.0 41 41699.0 42 47287.0 43 53172.5 44 59058.0 45 70044.0 46 81030.0 47 89502.5 48 97975.0 49 92940.5 50 87906.0 51 76852.5 52 65799.0 53 60971.0 54 56143.0 55 56479.0 56 56815.0 57 54773.0 58 52731.0 59 48434.0 60 44137.0 61 38846.5 62 33556.0 63 29133.5 64 24711.0 65 21025.0 66 17339.0 67 14995.0 68 12651.0 69 11429.5 70 10208.0 71 8026.0 72 5844.0 73 5193.0 74 4542.0 75 3244.0 76 1946.0 77 1786.5 78 1627.0 79 1380.0 80 1133.0 81 896.0 82 659.0 83 565.0 84 471.0 85 396.5 86 322.0 87 232.0 88 142.0 89 90.5 90 39.0 91 26.0 92 13.0 93 15.0 94 17.0 95 12.0 96 7.0 97 4.0 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.017595932073380303 2 0.0044253242340237895 3 3.160945881445564E-4 4 0.0 5 0.0 6 8.429189017188171E-4 7 1.0536486271485214E-4 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 5.268243135742607E-4 47 2.1072972542970428E-4 48 0.0 49 0.0 50 2.1072972542970428E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 949083.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.70739955587931 #Duplication Level Percentage of deduplicated Percentage of total 1 81.33819318657743 46.93815613371124 2 12.078643412932252 13.940542030461426 3 3.1219011992376475 5.404703996351571 4 1.1663534200956949 2.6922889134731447 5 0.5843571032593118 1.6860864420550663 6 0.34774769466394956 1.2040569096365075 7 0.2143777279293867 0.8659826841051894 8 0.14695619844698257 0.6784368048794491 9 0.11451663821235819 0.5947611657404969 >10 0.7043809552697945 7.9600255911647055 >50 0.09230067404214078 3.7779970174876896 >100 0.08218226043484306 9.06766443453348 >500 0.005699440814725553 2.1444274023797587 >1k 0.0020223822245800348 1.723541616448604 >5k 3.677058590145518E-4 1.3213288575716167 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 6619 0.6974100263096061 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 5835 0.6148039739411622 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 2327 0.2451840355374609 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 1979 0.20851706331269237 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 1641 0.17290373971507234 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 1458 0.1536219698382544 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 1447 0.15246295634839105 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 1446 0.15235759148567615 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 1374 0.14477132137020682 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 1321 0.13918698364631968 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1129 0.11895693000506805 No Hit TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 1099 0.11579598412362249 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1024 0.1078936194200086 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 1.0536486271485213E-4 7 0.0 0.0 0.0 0.0 1.0536486271485213E-4 8 0.0 0.0 0.0 0.0 1.0536486271485213E-4 9 0.0 0.0 0.0 1.0536486271485213E-4 1.0536486271485213E-4 10 0.0 0.0 0.0 1.0536486271485213E-4 1.0536486271485213E-4 11 0.0 0.0 0.0 1.0536486271485213E-4 1.0536486271485213E-4 12 0.0 0.0 0.0 1.0536486271485213E-4 5.268243135742606E-4 13 0.0 0.0 0.0 1.0536486271485213E-4 5.268243135742606E-4 14 0.0 0.0 0.0 2.1072972542970426E-4 5.268243135742606E-4 15 0.0 0.0 0.0 6.321891762891128E-4 5.268243135742606E-4 16 0.0 0.0 0.0 0.0010536486271485212 5.268243135742606E-4 17 0.0 0.0 0.0 0.0012643783525782255 5.268243135742606E-4 18 0.0 0.0 0.0 0.0018965675288673382 5.268243135742606E-4 19 0.0 0.0 0.0 0.0022126621170118948 5.268243135742606E-4 20 0.0 0.0 0.0 0.0028448512933010074 5.268243135742606E-4 21 0.0 0.0 0.0 0.0036877701950198244 5.268243135742606E-4 22 0.0 0.0 0.0 0.00495214854759805 5.268243135742606E-4 23 0.0 0.0 0.0 0.009798932232481248 5.268243135742606E-4 24 0.0 0.0 0.0 0.014434986191934741 6.321891762891128E-4 25 0.0 0.0 0.0 0.019176405014103087 6.321891762891128E-4 26 0.0 0.0 0.0 0.023917823836271432 6.321891762891128E-4 27 0.0 0.0 0.0 0.03245237771617446 6.321891762891128E-4 28 0.0 0.0 0.0 0.04614980986910523 6.321891762891128E-4 29 1.0536486271485213E-4 0.0 0.0 0.06332428249162612 6.321891762891128E-4 30 1.0536486271485213E-4 0.0 0.0 0.09366936295350355 6.321891762891128E-4 31 1.0536486271485213E-4 0.0 0.0 0.15067175368223854 7.375540390039648E-4 32 1.0536486271485213E-4 0.0 0.0 0.21958037389775184 7.375540390039648E-4 33 1.0536486271485213E-4 0.0 0.0 0.28164027803679975 7.375540390039648E-4 34 1.0536486271485213E-4 0.0 0.0 0.3652999790323923 7.375540390039648E-4 35 1.0536486271485213E-4 0.0 0.0 0.45612449069259486 7.375540390039648E-4 36 1.0536486271485213E-4 0.0 0.0 0.580033569245261 7.375540390039648E-4 37 1.0536486271485213E-4 0.0 0.0 0.7720083491117216 7.375540390039648E-4 38 1.0536486271485213E-4 0.0 0.0 0.978312750307402 8.42918901718817E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACTAA 50 8.3312225E-5 26.403889 1 TCGTATA 120 0.0 25.666391 44 GTACGAA 60 9.750911E-6 25.666391 19 ACGAATT 65 1.8130097E-5 23.692053 21 TGGTATA 445 0.0 22.74133 44 GTCGTAT 165 0.0 22.666422 43 CGGTGAT 185 0.0 20.216 43 CGATTAT 55 0.0044831936 19.999786 43 TCTATAC 90 1.00122525E-5 19.556376 3 TGTCGTA 70 8.122155E-4 18.85694 42 CTATACT 95 1.5959442E-5 18.527092 4 GTATTAA 120 3.15531E-7 18.336033 1 ATACCGT 240 0.0 18.334103 6 ACCGAAC 60 0.0074114185 18.333136 8 TACCGTC 240 0.0 18.333136 7 TACTCGT 110 2.7954284E-6 17.999807 36 CTATTCG 100 2.4823317E-5 17.59981 38 AAGTACT 515 0.0 17.515297 4 AGTACTC 515 0.0 17.515297 5 CGAATTT 90 2.2149221E-4 17.110928 22 >>END_MODULE