##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062375_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 70015 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.183889166607155 32.0 32.0 32.0 32.0 32.0 2 31.144240519888594 32.0 32.0 32.0 32.0 32.0 3 31.27055630936228 32.0 32.0 32.0 32.0 32.0 4 31.460415625223167 32.0 32.0 32.0 32.0 32.0 5 31.317232021709632 32.0 32.0 32.0 32.0 32.0 6 34.87011354709705 36.0 36.0 36.0 32.0 36.0 7 34.87072770120688 36.0 36.0 36.0 32.0 36.0 8 34.805398843105046 36.0 36.0 36.0 32.0 36.0 9 35.00852674426908 36.0 36.0 36.0 36.0 36.0 10 34.80402770834821 36.0 36.0 36.0 32.0 36.0 11 35.004284796115115 36.0 36.0 36.0 36.0 36.0 12 34.85173177176319 36.0 36.0 36.0 32.0 36.0 13 34.921659644361924 36.0 36.0 36.0 32.0 36.0 14 34.876255088195386 36.0 36.0 36.0 32.0 36.0 15 34.86678568878098 36.0 36.0 36.0 32.0 36.0 16 34.85423123616368 36.0 36.0 36.0 32.0 36.0 17 34.807169892165966 36.0 36.0 36.0 32.0 36.0 18 34.842233807041346 36.0 36.0 36.0 32.0 36.0 19 34.824623295008216 36.0 36.0 36.0 32.0 36.0 20 34.8164107691209 36.0 36.0 36.0 32.0 36.0 21 34.812183103620654 36.0 36.0 36.0 32.0 36.0 22 34.76987788331072 36.0 36.0 36.0 32.0 36.0 23 34.72812968649575 36.0 36.0 36.0 32.0 36.0 24 34.71676069413697 36.0 36.0 36.0 32.0 36.0 25 34.68562450903378 36.0 36.0 36.0 32.0 36.0 26 34.64129115189602 36.0 36.0 36.0 32.0 36.0 27 34.608169677926156 36.0 36.0 36.0 32.0 36.0 28 34.59470113547097 36.0 36.0 36.0 32.0 36.0 29 34.56520745554524 36.0 36.0 36.0 32.0 36.0 30 34.53151467542669 36.0 36.0 36.0 32.0 36.0 31 34.530143540669854 36.0 36.0 36.0 32.0 36.0 32 34.491523245018925 36.0 36.0 36.0 32.0 36.0 33 34.474512604441905 36.0 36.0 36.0 32.0 36.0 34 34.453531386131544 36.0 36.0 36.0 32.0 36.0 35 34.421438263229305 36.0 36.0 36.0 32.0 36.0 36 34.41249732200243 36.0 36.0 36.0 32.0 36.0 37 34.40766978504606 36.0 36.0 36.0 32.0 36.0 38 34.36342212383061 36.0 36.0 36.0 32.0 36.0 39 34.36709276583589 36.0 36.0 36.0 32.0 36.0 40 34.33929872170249 36.0 36.0 36.0 32.0 36.0 41 34.30492037420553 36.0 36.0 36.0 32.0 36.0 42 34.28421052631579 36.0 36.0 36.0 32.0 36.0 43 34.25628793829894 36.0 36.0 36.0 32.0 36.0 44 34.21553952724416 36.0 36.0 36.0 32.0 36.0 45 34.1716203670642 36.0 36.0 36.0 32.0 36.0 46 34.185146040134256 36.0 36.0 36.0 32.0 36.0 47 34.12513032921517 36.0 36.0 36.0 32.0 36.0 48 34.11738913090052 36.0 36.0 36.0 32.0 36.0 49 34.080239948582445 36.0 36.0 36.0 32.0 36.0 50 33.471784617581946 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 1.0 21 0.0 22 9.0 23 24.0 24 67.0 25 138.0 26 279.0 27 500.0 28 849.0 29 1393.0 30 1917.0 31 2801.0 32 4407.0 33 7200.0 34 14999.0 35 35431.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.57834595057849 18.908727324667904 12.705327810312813 26.807598914440796 2 17.104699328667333 20.615626339094415 35.592058277388944 26.687616054849308 3 19.838606012997214 23.086481468256803 27.67692637292009 29.397986145825893 4 14.465471684639006 16.52503035063915 33.095765193172895 35.91373277154896 5 16.70070699135899 33.928443904877525 31.43469256587874 17.93615653788474 6 34.37263443547811 33.49139470113547 16.480754124116263 15.655216739270156 7 30.299221595372423 29.41369706491466 20.01428265371706 20.27279868599586 8 28.006855673784187 31.15189602228094 19.450117831893166 21.391130472041706 9 27.167035635221026 15.09533671356138 19.378704563307863 38.35892308790974 10 17.791901735342428 25.461686781403987 29.750767692637293 26.9956437906163 11 36.402199528672426 21.426837106334357 21.961008355352423 20.209955009640794 12 25.68878097550525 23.95058201813897 26.81711061915304 23.543526387202743 13 29.6579304434764 19.690066414339785 24.66899950010712 25.983003642076696 14 24.489038063272154 20.517032064557593 24.109119474398344 30.884810397771904 15 25.843033635649505 27.21702492323074 21.93387131329001 25.006070127829748 16 26.382917946154393 25.671641791044774 23.19645790187817 24.748982360922657 17 24.656145111761766 25.535956580732698 24.48332500178533 25.324573305720204 18 25.190316360779835 24.48760979790045 25.904449046632866 24.417624794686855 19 26.1715346711419 24.573305720202814 25.1831750339213 24.071984574733985 20 26.34149825037492 23.81775333857031 24.834678283225024 25.006070127829748 21 26.977076340784116 23.90630579161608 24.333357137756195 24.783260729843605 22 26.43576376490752 24.140541312575877 24.446190102120973 24.97750482039563 23 24.93322859387274 24.48332500178533 25.05320288509605 25.530243519245875 24 25.251731771763193 25.01321145468828 24.686138684567595 25.048918088980933 25 25.313147182746555 24.579018781689637 24.790402056702135 25.31743197886167 26 24.724701849603655 25.156037991858888 25.537384846104406 24.58187531243305 27 25.146040134256946 24.684710419195888 25.003213597086337 25.166035849460826 28 24.6875669499393 24.644718988788117 25.1588945226023 25.508819538670284 29 24.69756480754124 24.569020924087695 25.316003713489966 25.417410554881098 30 24.728986645718777 24.98036135113904 25.368849532243093 24.92180247089909 31 25.600228522459474 24.343354995358137 24.564736127972576 25.491680354209812 32 25.03035063914875 24.526172962936513 24.54902520888381 25.89445118903092 33 24.39191601799614 24.401913875598087 25.521673927015637 25.68449617939013 34 25.341712490180672 24.24480468471042 25.35456687852603 25.05891594658288 35 25.60451331857459 24.17910447761194 25.11461829607941 25.10176390773406 36 24.42619438691709 25.026065843033635 24.968935228165392 25.578804541883883 37 25.374562593729916 24.526172962936513 24.751838891666072 25.347425551667502 38 24.68042562308077 24.100549882168107 25.60879811468971 25.610226380061412 39 25.358851674641148 23.883453545668782 24.95179604370492 25.805898735985146 40 25.20174248375348 23.930586302935087 25.701635363850606 25.166035849460826 41 24.397629079482968 24.409055202456617 25.880168535313864 25.313147182746555 42 25.365993001499675 24.493322859387273 25.351710347782618 24.78897379133043 43 24.649003784903233 23.789188031136185 25.491680354209812 26.070127829750767 44 24.126258658858816 24.087695493822753 25.690209240876953 26.095836606441473 45 24.286224380489895 24.607584089123762 25.74162679425837 25.36456473612797 46 24.289080911233306 23.81775333857031 25.893022923659213 26.00014282653717 47 24.75612368778119 23.74348353924159 25.87017067771192 25.6302220952653 48 24.39191601799614 24.430479183032208 25.693065771620365 25.484539027351282 49 23.88059701492537 24.61472541598229 25.540241376847817 25.964436192244516 50 23.73348568163965 24.650432050274944 25.788759551524677 25.827322716560737 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 3.0 1 3.5 2 4.0 3 7.0 4 10.0 5 10.0 6 10.0 7 9.0 8 8.0 9 15.0 10 22.0 11 37.5 12 53.0 13 72.0 14 91.0 15 125.0 16 159.0 17 199.0 18 239.0 19 253.5 20 268.0 21 284.0 22 300.0 23 308.5 24 317.0 25 356.0 26 395.0 27 470.5 28 546.0 29 662.0 30 778.0 31 906.5 32 1035.0 33 1275.5 34 1516.0 35 1724.0 36 1932.0 37 2301.0 38 2670.0 39 2833.5 40 2997.0 41 3166.5 42 3336.0 43 3467.5 44 3599.0 45 3924.5 46 4250.0 47 4515.0 48 4780.0 49 4963.5 50 5147.0 51 5012.5 52 4878.0 53 4815.0 54 4752.0 55 4890.5 56 5029.0 57 4931.5 58 4834.0 59 4361.5 60 3889.0 61 3533.0 62 3177.0 63 2842.0 64 2507.0 65 2162.0 66 1817.0 67 1613.0 68 1409.0 69 1277.0 70 1145.0 71 928.0 72 711.0 73 596.5 74 482.0 75 381.0 76 280.0 77 258.0 78 236.0 79 198.5 80 161.0 81 136.0 82 111.0 83 86.5 84 62.0 85 54.5 86 47.0 87 31.0 88 15.0 89 10.5 90 6.0 91 4.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0071413268585303145 2 0.0071413268585303145 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 70015.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 79.97714775405271 #Duplication Level Percentage of deduplicated Percentage of total 1 89.89392099435673 71.89459401556809 2 6.773698121294378 10.834821109762194 3 1.3179512822344455 3.1621795329572233 4 0.5571826559039932 1.7824751838891668 5 0.30895063933138084 1.2354495465257445 6 0.20358597042645904 0.9769335142469471 7 0.16429744981784414 0.9198028993787046 8 0.11607971997999857 0.7426979932871528 9 0.11072219444246018 0.7969720774119832 >10 0.5464676048289163 7.33557094908234 >50 0.007143367383384528 0.318503177890452 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.001428265371706063 0.0 10 0.0 0.0 0.0 0.001428265371706063 0.0 11 0.0 0.0 0.0 0.001428265371706063 0.0 12 0.0 0.0 0.0 0.001428265371706063 0.0 13 0.0 0.0 0.0 0.001428265371706063 0.0 14 0.0 0.0 0.0 0.001428265371706063 0.0 15 0.0 0.0 0.0 0.001428265371706063 0.0 16 0.0 0.0 0.0 0.001428265371706063 0.001428265371706063 17 0.0 0.0 0.0 0.001428265371706063 0.001428265371706063 18 0.0 0.0 0.0 0.001428265371706063 0.001428265371706063 19 0.0 0.0 0.0 0.001428265371706063 0.001428265371706063 20 0.0 0.0 0.0 0.001428265371706063 0.001428265371706063 21 0.0 0.0 0.0 0.002856530743412126 0.001428265371706063 22 0.0 0.0 0.0 0.004284796115118189 0.001428265371706063 23 0.0 0.0 0.0 0.007141326858530315 0.001428265371706063 24 0.0 0.0 0.0 0.009997857601942441 0.001428265371706063 25 0.0 0.0 0.0 0.011426122973648504 0.001428265371706063 26 0.0 0.0 0.0 0.01428265371706063 0.001428265371706063 27 0.0 0.0 0.0 0.015710919088766692 0.001428265371706063 28 0.0 0.0 0.0 0.021423980575590945 0.001428265371706063 29 0.0 0.0 0.0 0.04284796115118189 0.001428265371706063 30 0.0 0.0 0.0 0.06998500321359709 0.001428265371706063 31 0.0 0.0 0.0 0.1342569449403699 0.001428265371706063 32 0.0 0.0 0.0 0.23852031707491253 0.001428265371706063 33 0.0 0.0 0.0 0.3756337927586946 0.001428265371706063 34 0.0 0.0 0.0 0.5613082910804827 0.001428265371706063 35 0.0 0.0 0.0 0.7569806470042134 0.001428265371706063 36 0.0 0.0 0.0 0.9883596372205956 0.001428265371706063 37 0.0 0.0 0.0 1.2768692423052204 0.001428265371706063 38 0.0 0.0 0.0 1.6210811968863814 0.001428265371706063 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGGAC 20 7.8058604E-4 44.000004 3 TCTTTCG 25 4.4000066E-5 44.0 10 CTTTAGG 25 4.4000066E-5 44.0 1 TTCGAGG 25 4.4000066E-5 44.0 13 TTTAGGA 30 1.2886502E-4 36.666664 2 TTTCGAG 30 1.2886502E-4 36.666664 12 TCGAGGC 30 1.2886502E-4 36.666664 14 GACTCTT 30 1.2886502E-4 36.666664 7 ATACAGG 30 1.2886502E-4 36.666664 1 CCTGTAA 35 3.18723E-4 31.428572 21 TACAGGA 35 3.18723E-4 31.428572 2 CCCTGTA 35 3.18723E-4 31.428572 20 AGGACTC 45 4.0156778E-5 29.333334 5 GTAATTG 45 4.0156778E-5 29.333334 24 GGAATGA 40 6.965719E-4 27.500002 30 ACTCTTT 40 6.965719E-4 27.500002 8 TAATTGG 40 6.965719E-4 27.500002 25 CGAGGCC 40 6.965719E-4 27.500002 15 CTTTCGA 40 6.965719E-4 27.500002 11 AATATGG 50 8.231763E-5 26.400002 14 >>END_MODULE