##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062373_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1994270 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.256481318978874 32.0 32.0 32.0 32.0 32.0 2 31.403523093663345 32.0 32.0 32.0 32.0 32.0 3 31.502783474654887 32.0 32.0 32.0 32.0 32.0 4 31.607322478902056 32.0 32.0 32.0 32.0 32.0 5 31.548010550226397 32.0 32.0 32.0 32.0 32.0 6 35.132155625868116 36.0 36.0 36.0 36.0 36.0 7 35.15063908096697 36.0 36.0 36.0 36.0 36.0 8 35.09157787059927 36.0 36.0 36.0 36.0 36.0 9 35.214807423267665 36.0 36.0 36.0 36.0 36.0 10 35.09319751086864 36.0 36.0 36.0 36.0 36.0 11 35.224545322348526 36.0 36.0 36.0 36.0 36.0 12 35.13347139554825 36.0 36.0 36.0 36.0 36.0 13 35.17220687269026 36.0 36.0 36.0 36.0 36.0 14 35.13404253185376 36.0 36.0 36.0 36.0 36.0 15 35.094744442828706 36.0 36.0 36.0 36.0 36.0 16 35.09551715665381 36.0 36.0 36.0 36.0 36.0 17 35.066473446424006 36.0 36.0 36.0 36.0 36.0 18 35.07498182292267 36.0 36.0 36.0 36.0 36.0 19 35.05837474364053 36.0 36.0 36.0 36.0 36.0 20 35.05164044988893 36.0 36.0 36.0 36.0 36.0 21 35.02713323672321 36.0 36.0 36.0 36.0 36.0 22 34.996933715093746 36.0 36.0 36.0 36.0 36.0 23 34.94010088904712 36.0 36.0 36.0 32.0 36.0 24 34.920008323847824 36.0 36.0 36.0 32.0 36.0 25 34.886164862330574 36.0 36.0 36.0 32.0 36.0 26 34.82274817351713 36.0 36.0 36.0 32.0 36.0 27 34.79477803908197 36.0 36.0 36.0 32.0 36.0 28 34.76572630586631 36.0 36.0 36.0 32.0 36.0 29 34.734273192697074 36.0 36.0 36.0 32.0 36.0 30 34.71846941487361 36.0 36.0 36.0 32.0 36.0 31 34.705464656240125 36.0 36.0 36.0 32.0 36.0 32 34.66256775662272 36.0 36.0 36.0 32.0 36.0 33 34.63351652484368 36.0 36.0 36.0 32.0 36.0 34 34.60868939511701 36.0 36.0 36.0 32.0 36.0 35 34.548655899151065 36.0 36.0 36.0 32.0 36.0 36 34.524594463136886 36.0 36.0 36.0 32.0 36.0 37 34.48516750490154 36.0 36.0 36.0 32.0 36.0 38 34.42780967471807 36.0 36.0 36.0 32.0 36.0 39 34.345579585512496 36.0 36.0 36.0 32.0 36.0 40 34.293642285146944 36.0 36.0 36.0 32.0 36.0 41 34.281332016226486 36.0 36.0 36.0 32.0 36.0 42 34.183005310213765 36.0 36.0 36.0 32.0 36.0 43 34.20102694218937 36.0 36.0 36.0 32.0 36.0 44 34.17800247709688 36.0 36.0 36.0 32.0 36.0 45 34.059816373911254 36.0 36.0 36.0 32.0 36.0 46 34.14085755690052 36.0 36.0 36.0 32.0 36.0 47 34.06441153905941 36.0 36.0 36.0 32.0 36.0 48 34.07099389751639 36.0 36.0 36.0 32.0 36.0 49 34.088890671774635 36.0 36.0 36.0 32.0 36.0 50 33.531927472207876 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 8.0 21 66.0 22 187.0 23 623.0 24 1756.0 25 4228.0 26 8826.0 27 16354.0 28 26468.0 29 37917.0 30 52226.0 31 72429.0 32 105543.0 33 155231.0 34 334393.0 35 1178012.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.887136644782146 17.692410696150507 11.978980426299342 26.441472232768003 2 15.735793953021435 20.52822555167873 36.63254079609425 27.103439699205587 3 18.440656242760483 24.62494897861966 28.239067885764257 28.695326892855604 4 12.448333146965778 16.325797899679433 35.34220844049468 35.88366051286012 5 14.402914349611637 36.629593786197454 33.4731004327398 15.494391431451108 6 34.60810796580789 34.64145365125227 17.037489074900428 13.712949308039418 7 30.01569496607781 30.31284630466286 21.379953566969366 18.291505162289962 8 28.444694048448802 32.61258505618597 19.7540954835604 19.18862541180482 9 27.284871155861545 14.79072542835223 18.451964879379425 39.472438536406806 10 15.964337827876868 26.89360016447121 31.530234120755967 25.611827886895956 11 37.206346181810886 21.093883977595812 21.808030005967098 19.891739834626204 12 24.52265741348965 23.692679526844408 28.734724987088008 23.049938072577937 13 29.99277931273097 19.399880658085415 25.040390719411114 25.566949309772497 14 24.0258340144514 19.485626319405096 24.76324670180066 31.725292964342845 15 25.84509620061476 26.552021541717018 22.838783113620522 24.764099144047698 16 26.314741735070978 25.198192822436276 24.028291053869335 24.458774388623404 17 24.48003530113776 25.50888294965075 25.656706464019415 24.354375285192077 18 25.72495198744403 23.814027187893313 26.733341022028114 23.727679802634547 19 25.2984300019556 26.035240965365773 24.949680835593977 23.71664819708465 20 25.274862481008086 23.757765999588823 26.23335857230967 24.734012947093422 21 26.38098151203197 24.663761677205194 23.92900660392023 25.026250206842604 22 25.12222517512674 24.879279134720974 24.555601799154577 25.44289389099771 23 23.805352334438165 24.41540012134766 25.19403089852427 26.5852166456899 24 24.323587076975535 25.68995171165389 24.86664293200018 25.1198182793704 25 25.30585126387099 24.161974055669493 24.659950758924317 25.8722239215352 26 24.36365186258631 24.84808977721171 25.48717074418208 25.301087616019895 27 25.88771831296665 24.942861297617675 24.54722780766897 24.622192581746706 28 24.746448575167857 23.944300420705318 25.470172042902917 25.839078961223905 29 24.28888766315494 25.045204510923796 25.98248983337261 24.68341799254865 30 25.30885988356642 24.457671228068417 25.978628771430145 24.25484011693502 31 24.767258194727894 24.540759275323804 24.789521980474056 25.90246054947424 32 24.389225129997445 24.97881430297803 24.84558259413219 25.78637797289234 33 24.231222452325916 24.498789030572592 25.323802694720378 25.946185822381125 34 24.567235128643564 24.901843782436682 25.996580202279528 24.534340886640223 35 26.0435146695282 24.404518946782535 25.37133888590813 24.180627497781142 36 24.801105166301454 25.173371709949006 25.05302692213191 24.972496201617634 37 25.939867721020725 24.921700672426503 24.926765182247138 24.211666424305637 38 24.75131251034213 24.80606938879891 24.938298224412943 25.50431987644602 39 24.972646632602405 24.65468567445732 25.046207384155604 25.32646030878467 40 25.62516610087902 24.82056090699855 24.87200830379036 24.68226468833207 41 24.041579124190807 25.03642937014547 25.759801832249394 25.162189673414332 42 26.217763893555034 25.169961940960857 24.979616601563478 23.632657563920635 43 25.110140552683436 23.84747301017415 25.02218857025378 26.020197866888633 44 24.747652023046026 24.664212970159507 25.55767273237826 25.030462274416205 45 25.06215306854137 24.793533473401293 25.207619830815286 24.93669362724205 46 24.455890582409186 24.549809754757135 25.921440849474592 25.07285881335909 47 25.08266182613187 24.15851414301975 26.166717646055947 24.59210638479243 48 25.257964067052104 26.134274697006926 24.236086387500187 24.371674848440783 49 24.261208361957006 24.997718463397632 25.893384546726374 24.847688627918988 50 24.118962888156013 26.364497467493102 24.367274424864448 25.149265219486438 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 27.0 1 34.0 2 41.0 3 180.5 4 320.0 5 335.5 6 351.0 7 324.0 8 297.0 9 407.0 10 517.0 11 766.0 12 1015.0 13 1772.5 14 2530.0 15 3298.5 16 4067.0 17 4843.0 18 5619.0 19 5942.5 20 6266.0 21 7101.0 22 7936.0 23 8478.0 24 9020.0 25 10318.5 26 11617.0 27 14421.0 28 17225.0 29 20118.0 30 23011.0 31 25720.5 32 28430.0 33 33433.0 34 38436.0 35 44603.0 36 50770.0 37 61143.0 38 71516.0 39 77886.5 40 84257.0 41 93583.5 42 102910.0 43 107645.0 44 112380.0 45 128150.5 46 143921.0 47 156433.5 48 168946.0 49 167228.0 50 165510.0 51 153801.5 52 142093.0 53 138312.5 54 134532.0 55 135534.0 56 136536.0 57 132946.5 58 129357.0 59 118633.5 60 107910.0 61 94836.5 62 81763.0 63 71072.5 64 60382.0 65 51691.5 66 43001.0 67 37155.0 68 31309.0 69 28976.5 70 26644.0 71 20755.0 72 14866.0 73 13310.0 74 11754.0 75 8427.5 76 5101.0 77 4763.5 78 4426.0 79 3769.0 80 3112.0 81 2476.0 82 1840.0 83 1585.0 84 1330.0 85 1094.0 86 858.0 87 612.0 88 366.0 89 227.5 90 89.0 91 65.5 92 42.0 93 26.0 94 10.0 95 7.5 96 5.0 97 5.5 98 6.0 99 4.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015995828047355675 2 0.004212067573598359 3 4.011492927236533E-4 4 1.5043098477136998E-4 5 0.0 6 4.5129295431410994E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.0028732318091333E-4 47 0.0 48 0.0 49 0.0 50 5.0143661590456665E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1994270.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.353047374832386 #Duplication Level Percentage of deduplicated Percentage of total 1 79.16002667000905 43.02588679787997 2 12.926665959011654 14.052073745375871 3 3.649575291620045 5.950966161703261 4 1.4663645212041292 3.1880552115912577 5 0.7434272843634189 2.0203769203373945 6 0.46110774515775305 1.5037566670476894 7 0.29798868666325 1.1337615242360197 8 0.19998535634428266 0.8695850838122824 9 0.15079398045109063 0.737650112696791 >10 0.7755956853174043 7.668452651005257 >50 0.07557100255158619 2.9178233769211284 >100 0.0778798961485146 9.234137333335068 >500 0.010846276391902816 4.1375304320328485 >1k 0.0040789415490916575 3.2950593996564352 >5k 9.27032170248104E-5 0.264884582368589 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 5257 0.26360522898103067 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 4544 0.22785279826703508 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2024 0.10149077105908427 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2015 0.10103947810477018 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2014 0.10098933444317972 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2014 0.10098933444317972 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 5.014366159045666E-5 0.0 6 0.0 0.0 0.0 5.014366159045666E-5 5.014366159045666E-5 7 0.0 0.0 0.0 1.5043098477136998E-4 5.014366159045666E-5 8 0.0 0.0 0.0 3.0086196954273996E-4 5.014366159045666E-5 9 0.0 0.0 0.0 4.0114929272365326E-4 5.014366159045666E-5 10 0.0 0.0 0.0 4.5129295431410994E-4 5.014366159045666E-5 11 0.0 0.0 0.0 4.5129295431410994E-4 5.014366159045666E-5 12 5.014366159045666E-5 0.0 0.0 4.5129295431410994E-4 1.5043098477136998E-4 13 5.014366159045666E-5 0.0 0.0 4.5129295431410994E-4 1.5043098477136998E-4 14 5.014366159045666E-5 0.0 0.0 4.5129295431410994E-4 1.5043098477136998E-4 15 5.014366159045666E-5 0.0 0.0 5.014366159045666E-4 2.0057464636182663E-4 16 5.014366159045666E-5 0.0 0.0 5.515802774950232E-4 2.0057464636182663E-4 17 5.014366159045666E-5 0.0 0.0 6.518676006759366E-4 2.0057464636182663E-4 18 5.014366159045666E-5 0.0 0.0 7.521549238568498E-4 2.507183079522833E-4 19 5.014366159045666E-5 0.0 0.0 0.0010028732318091331 2.507183079522833E-4 20 5.014366159045666E-5 0.0 0.0 0.0012535915397614164 2.507183079522833E-4 21 5.014366159045666E-5 0.0 0.0 0.0018553154788468963 2.507183079522833E-4 22 5.014366159045666E-5 0.0 0.0 0.0026074704027037464 2.507183079522833E-4 23 5.014366159045666E-5 0.0 0.0 0.004161923912007903 2.507183079522833E-4 24 5.014366159045666E-5 0.0 0.0 0.005766521082902516 2.507183079522833E-4 25 5.014366159045666E-5 0.0 0.0 0.007070256284254389 2.507183079522833E-4 26 5.014366159045666E-5 0.0 0.0 0.009076002747872656 2.507183079522833E-4 27 5.014366159045666E-5 0.0 0.0 0.011432754842624118 2.507183079522833E-4 28 5.014366159045666E-5 0.0 0.0 0.01664769564803161 2.507183079522833E-4 29 5.014366159045666E-5 0.0 0.0 0.024269532209781022 2.507183079522833E-4 30 5.014366159045666E-5 0.0 0.0 0.037708033516023406 2.507183079522833E-4 31 5.014366159045666E-5 0.0 0.0 0.067092219208031 2.507183079522833E-4 32 5.014366159045666E-5 0.0 0.0 0.10234321330612203 2.507183079522833E-4 33 5.014366159045666E-5 0.0 0.0 0.13608989755649936 2.507183079522833E-4 34 5.014366159045666E-5 0.0 0.0 0.1784111479388448 3.0086196954273996E-4 35 5.014366159045666E-5 0.0 0.0 0.2239917363245699 3.0086196954273996E-4 36 5.014366159045666E-5 0.0 0.0 0.2908332372246486 3.0086196954273996E-4 37 5.014366159045666E-5 0.0 0.0 0.38851309000285816 3.0086196954273996E-4 38 5.014366159045666E-5 0.0 0.0 0.5165800017048845 3.510056311331966E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTATA 115 8.780262E-9 21.043324 44 TACCGTC 495 0.0 18.222088 7 ATACCGT 530 0.0 17.848923 6 ACCGTCG 500 0.0 17.159872 8 TGGTATA 625 0.0 16.895876 44 CGTCGTA 525 0.0 16.76178 10 GTCGTAG 500 0.0 16.719875 11 GTATAGG 225 1.8189894E-12 16.62752 1 CGAGCCG 770 0.0 16.571306 15 GTCGTAT 160 2.1316737E-8 16.499876 43 CCGTCGT 540 0.0 15.88877 9 TCTATAC 250 0.0 15.839882 3 GTATAGT 140 1.5821297E-6 15.719292 1 CCGATAA 450 0.0 15.644328 9 GTGTAAT 270 0.0 15.486414 1 CGATAAC 470 0.0 15.446694 10 AGGCCCG 875 0.0 15.337029 10 GTCCTAA 345 0.0 15.309225 1 GTAATAC 175 6.416121E-8 15.085603 3 GACTATA 265 1.8189894E-12 14.948157 1 >>END_MODULE