##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062372_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3612838 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.32503837703213 32.0 32.0 32.0 32.0 32.0 2 31.439409406123385 32.0 32.0 32.0 32.0 32.0 3 31.512671478765448 32.0 32.0 32.0 32.0 32.0 4 31.61238173424881 32.0 32.0 32.0 32.0 32.0 5 31.54151057977136 32.0 32.0 32.0 32.0 32.0 6 35.150264141375835 36.0 36.0 36.0 36.0 36.0 7 35.159496218762094 36.0 36.0 36.0 36.0 36.0 8 35.101386500031275 36.0 36.0 36.0 36.0 36.0 9 35.2277439508774 36.0 36.0 36.0 36.0 36.0 10 35.101956965687364 36.0 36.0 36.0 36.0 36.0 11 35.237586628572885 36.0 36.0 36.0 36.0 36.0 12 35.138645851267064 36.0 36.0 36.0 36.0 36.0 13 35.18505922490851 36.0 36.0 36.0 36.0 36.0 14 35.14883645488671 36.0 36.0 36.0 36.0 36.0 15 35.10672247136462 36.0 36.0 36.0 36.0 36.0 16 35.11667282064681 36.0 36.0 36.0 36.0 36.0 17 35.08243187211826 36.0 36.0 36.0 36.0 36.0 18 35.10263980837225 36.0 36.0 36.0 36.0 36.0 19 35.085973686060655 36.0 36.0 36.0 36.0 36.0 20 35.078950398550944 36.0 36.0 36.0 36.0 36.0 21 35.07437006585958 36.0 36.0 36.0 36.0 36.0 22 35.056305320083545 36.0 36.0 36.0 36.0 36.0 23 35.010399857397424 36.0 36.0 36.0 36.0 36.0 24 34.988868861543196 36.0 36.0 36.0 36.0 36.0 25 34.951936953718935 36.0 36.0 36.0 32.0 36.0 26 34.912025670677735 36.0 36.0 36.0 32.0 36.0 27 34.89569031326619 36.0 36.0 36.0 32.0 36.0 28 34.87819963142549 36.0 36.0 36.0 32.0 36.0 29 34.85120174223145 36.0 36.0 36.0 32.0 36.0 30 34.84336579719323 36.0 36.0 36.0 32.0 36.0 31 34.84492468247954 36.0 36.0 36.0 32.0 36.0 32 34.80517864349301 36.0 36.0 36.0 32.0 36.0 33 34.78815684511733 36.0 36.0 36.0 32.0 36.0 34 34.77738110593389 36.0 36.0 36.0 32.0 36.0 35 34.74915205165579 36.0 36.0 36.0 32.0 36.0 36 34.73109118094971 36.0 36.0 36.0 32.0 36.0 37 34.71303252456933 36.0 36.0 36.0 32.0 36.0 38 34.6830807249038 36.0 36.0 36.0 32.0 36.0 39 34.66611649899608 36.0 36.0 36.0 32.0 36.0 40 34.661157516611595 36.0 36.0 36.0 32.0 36.0 41 34.6290500708861 36.0 36.0 36.0 32.0 36.0 42 34.59247549987018 36.0 36.0 36.0 32.0 36.0 43 34.59543383899306 36.0 36.0 36.0 32.0 36.0 44 34.55891075104945 36.0 36.0 36.0 32.0 36.0 45 34.51465745211936 36.0 36.0 36.0 32.0 36.0 46 34.52958173048446 36.0 36.0 36.0 32.0 36.0 47 34.49823961107584 36.0 36.0 36.0 32.0 36.0 48 34.46270355880889 36.0 36.0 36.0 32.0 36.0 49 34.46574770305228 36.0 36.0 36.0 32.0 36.0 50 33.94886540719512 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 5.0 20 27.0 21 103.0 22 308.0 23 923.0 24 2394.0 25 5581.0 26 11345.0 27 21122.0 28 35376.0 29 53437.0 30 77953.0 31 112726.0 32 167252.0 33 277434.0 34 625695.0 35 2221155.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.79546848159944 17.68919968274665 12.012108779695787 26.50322305595812 2 16.5729049487586 20.132537844229695 36.201498932655426 27.093058274356274 3 18.650221503176887 23.72460256060717 27.938989403000154 29.686186533215793 4 12.643467863143298 15.716294428467434 35.16437252790748 36.47586518048178 5 15.281421419947423 35.8329656630051 32.48828206523514 16.39733085181234 6 35.16512899093559 34.53287909805437 16.50786146635917 13.79413044465087 7 31.25098952734085 29.711506417672982 20.36425124196061 18.673252813025556 8 28.812446060410124 31.63834082790316 19.246033173920335 20.303179937766377 9 27.660000254647453 14.492817004249844 18.369021805018658 39.478160936084045 10 16.789930796786347 25.57014734676728 29.877481359529547 27.76244049691683 11 38.078651741373406 20.72237947010079 21.85727674476409 19.341692043761718 12 25.977306483158113 23.03582391460674 27.343379359938087 23.64349024229705 13 29.64132352460863 18.695330374625158 25.097305774573897 26.56604032619232 14 24.44059213283297 19.582195492850772 23.903645831891716 32.073566542424544 15 25.91984473148256 26.62723875247105 21.574950219190566 25.877966296855824 16 26.97394679750379 25.100654942181187 22.883063121014562 25.04233513930046 17 24.863002437419006 25.26886065746651 24.47895532542561 25.389181579688874 18 26.09258981443397 23.70211451496026 25.61833660961272 24.586959060993046 19 26.226694914081396 24.46602919920572 24.5651202738678 24.74215561284508 20 26.54746766946096 23.26428696775222 24.18198657122185 26.006258791564967 21 27.804900192037397 23.59303129561857 23.449404595500823 25.152663916843217 22 26.59800965335285 23.71119325029243 24.078882031245243 25.611915065109482 23 24.638469812374648 23.368249558934 24.977372359347417 27.015908269343935 24 25.383119863110387 24.473474869340944 24.37463290631908 25.76877236122959 25 25.56718568615587 23.680497160404094 24.522909690387447 26.22940746305259 26 25.18546361613778 24.786386768518266 24.947368246237446 25.080781369106504 27 26.273555581512376 23.88676159849957 24.114255884155337 25.72542693583272 28 25.10751935182258 23.845796573220277 25.04665307439747 26.00003100055967 29 24.983544792210445 24.126406996383455 25.01484982166374 25.87519838974236 30 24.92406246834206 24.30147712131017 25.40515240373357 25.36930800661419 31 25.947717556115162 24.1099933072006 23.728520348822727 26.213768787861508 32 25.47097323489179 24.11176476775322 23.868521090621833 26.548740906733155 33 24.84105293400922 23.6966340588756 24.800143266872194 26.66216974024299 34 25.878049334069225 23.904586920310294 24.899538811316756 25.317824934303722 35 26.705764277280075 23.644680442355842 24.76703909779514 24.88251618256894 36 25.129662608730314 24.452494133420874 24.31661757322083 26.101225684627988 37 26.504841899913583 24.224335550057877 24.070716705260516 25.200105844768018 38 25.31458648298097 23.849311815254378 24.659533585508125 26.176568116256526 39 26.01791168051266 23.70388597551288 24.094022483155904 26.184179860818556 40 26.362017892858745 24.006611976512648 24.611067531951335 25.020302598677276 41 24.92583392889468 24.48139108368546 25.260086391916825 25.33268859550304 42 26.850525819314345 24.64566637086966 24.32320519215088 24.180602617665116 43 25.620108070165337 23.282527475629962 24.756299618194895 26.34106483600981 44 25.148761167813227 24.169973854349404 24.406519196266206 26.274745781571163 45 25.19996744941235 24.454708459111647 24.562407724896605 25.782916366579407 46 24.982451439756957 23.915975057793997 24.99274807131912 26.10882543112993 47 25.422569576208392 23.667190078046698 25.329374117902358 25.580866227842552 48 26.383995075339662 24.6277303327744 23.89210365922856 25.096170932657376 49 25.01067720464555 24.608804659606843 24.47566829059822 25.904849845149393 50 25.018371988550825 25.04981542206305 24.12013052346397 25.811682065922152 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 16.0 1 33.0 2 50.0 3 139.0 4 228.0 5 270.0 6 312.0 7 315.0 8 318.0 9 456.0 10 594.0 11 846.0 12 1098.0 13 2084.5 14 3071.0 15 4167.0 16 5263.0 17 5864.0 18 6465.0 19 7081.0 20 7697.0 21 8678.0 22 9659.0 23 10505.0 24 11351.0 25 13252.0 26 15153.0 27 19423.0 28 23693.0 29 28534.5 30 33376.0 31 38157.0 32 42938.0 33 51455.5 34 59973.0 35 71568.0 36 83163.0 37 103048.5 38 122934.0 39 134957.0 40 146980.0 41 161211.0 42 175442.0 43 179354.5 44 183267.0 45 207466.0 46 231665.0 47 252323.0 48 272981.0 49 281308.5 50 289636.0 51 272301.5 52 254967.0 53 251965.0 54 248963.0 55 258394.5 56 267826.0 57 265064.5 58 262303.0 59 240156.5 60 218010.0 61 193198.5 62 168387.0 63 148597.5 64 128808.0 65 110814.5 66 92821.0 67 83040.0 68 73259.0 69 68810.0 70 64361.0 71 49896.5 72 35432.0 73 31656.0 74 27880.0 75 20005.0 76 12130.0 77 11312.0 78 10494.0 79 9159.0 80 7824.0 81 6165.0 82 4506.0 83 4047.5 84 3589.0 85 3014.5 86 2440.0 87 1759.0 88 1078.0 89 683.0 90 288.0 91 176.0 92 64.0 93 50.0 94 36.0 95 29.5 96 23.0 97 20.5 98 18.0 99 13.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.016136898471506334 2 0.0037089955320443375 3 6.366186360971624E-4 4 2.214325690772739E-4 5 0.0 6 7.1965584950114E-4 7 5.535814226931847E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.660744268079554E-4 47 2.7679071134659236E-5 48 0.0 49 2.7679071134659236E-5 50 2.7679071134659236E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3612838.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.163883616938385 #Duplication Level Percentage of deduplicated Percentage of total 1 75.2705011100091 33.24237650811073 2 14.189021518156833 12.532845899322256 3 4.595817730937224 6.089074781813202 4 1.9390913211623173 3.425512137217115 5 1.0065957565674384 2.2227588921174193 6 0.5942054908432639 1.574545328528859 7 0.42687304506045043 1.3196660036880479 8 0.28899899689830777 1.021065445154304 9 0.2282139860851498 0.9070934329099938 >10 1.2482254588689483 10.168787541036673 >50 0.09830903833177077 3.02243629498773 >100 0.08353189870236373 7.903163851491538 >500 0.016916960341056105 5.236186757610242 >1k 0.013445196090337673 10.737377620766738 >5k 2.5249194535845393E-4 0.597109505245073 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 5401 0.14949466319829452 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 5352 0.14813838871269625 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 5333 0.1476124863611377 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 5333 0.1476124863611377 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 4967 0.13748194632585242 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 4826 0.13357919729586545 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 4766 0.1319184530277859 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 4688 0.12975948547928248 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 4599 0.1272960481482978 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 4570 0.12649335508539272 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 4310 0.1192967965903813 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 4260 0.11791284303364835 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCT 3748 0.1037411586127028 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA 3681 0.10188666084668065 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 2.7679071134659236E-5 0.0 3 0.0 0.0 0.0 2.7679071134659236E-5 0.0 4 0.0 0.0 0.0 2.7679071134659236E-5 0.0 5 0.0 0.0 0.0 2.7679071134659236E-5 0.0 6 0.0 0.0 0.0 2.7679071134659236E-5 0.0 7 0.0 0.0 0.0 5.535814226931847E-5 0.0 8 0.0 0.0 0.0 5.535814226931847E-5 0.0 9 0.0 0.0 0.0 5.535814226931847E-5 0.0 10 0.0 0.0 0.0 5.535814226931847E-5 0.0 11 0.0 0.0 0.0 5.535814226931847E-5 0.0 12 0.0 0.0 0.0 5.535814226931847E-5 2.214325690772739E-4 13 0.0 0.0 0.0 5.535814226931847E-5 2.214325690772739E-4 14 0.0 0.0 0.0 1.1071628453863694E-4 2.214325690772739E-4 15 0.0 0.0 0.0 1.383953556732962E-4 3.321488536159108E-4 16 0.0 0.0 0.0 1.9375349794261464E-4 3.875069958852293E-4 17 0.0 0.0 0.0 2.767907113465924E-4 3.875069958852293E-4 18 0.0 0.0 0.0 4.151860670198885E-4 4.151860670198885E-4 19 0.0 0.0 0.0 5.535814226931847E-4 4.151860670198885E-4 20 0.0 0.0 0.0 8.30372134039777E-4 4.151860670198885E-4 21 0.0 0.0 0.0 0.0010518047031170508 4.70544209289207E-4 22 0.0 0.0 0.0 0.0013839535567329616 4.982232804238662E-4 23 0.0 0.0 0.0 0.0020482512639647833 4.982232804238662E-4 24 0.0 0.0 0.0 0.0033491676072937675 4.982232804238662E-4 25 0.0 5.535814226931847E-5 0.0 0.003930428101121612 4.982232804238662E-4 26 0.0 5.535814226931847E-5 0.0 0.005092949088777299 5.259023515585254E-4 27 0.0 5.535814226931847E-5 0.0 0.006393865432106283 5.259023515585254E-4 28 0.0 5.535814226931847E-5 0.0 0.010268935390958576 5.259023515585254E-4 29 0.0 5.535814226931847E-5 0.0 0.016856554321007473 5.259023515585254E-4 30 0.0 5.535814226931847E-5 0.0 0.028786233980045605 5.259023515585254E-4 31 0.0 5.535814226931847E-5 0.0 0.06568243580254636 5.535814226931847E-4 32 0.0 5.535814226931847E-5 0.0 0.10637067037049544 5.535814226931847E-4 33 0.0 5.535814226931847E-5 0.0 0.1484151794240428 5.535814226931847E-4 34 0.0 5.535814226931847E-5 0.0 0.19580174920657942 5.81260493827844E-4 35 0.0 5.535814226931847E-5 0.0 0.2506893472666087 5.81260493827844E-4 36 0.0 5.535814226931847E-5 0.0 0.324011206702321 5.81260493827844E-4 37 0.0 5.535814226931847E-5 0.0 0.44449820335149265 5.81260493827844E-4 38 0.0 5.535814226931847E-5 0.0 0.6128976721347594 6.089395649625032E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 785 0.0 21.299269 4 AGGACGT 935 0.0 17.411688 5 GTATCAA 8190 0.0 17.382542 1 TAACGGC 410 0.0 17.170656 36 TTAACGG 415 0.0 16.433664 35 TGTAGGA 1195 0.0 16.201214 2 CGCAATA 1800 0.0 16.133263 36 GGACGTG 955 0.0 16.125584 6 GTCCTAC 1170 0.0 15.797426 1 ATACGAA 1855 0.0 15.773516 40 GTATTAC 310 0.0 15.615428 1 TCTAGCG 1925 0.0 15.3142185 28 TACGACG 1480 0.0 15.310743 5 TATGCGT 115 8.22506E-5 15.30428 39 TAGCGGC 1890 0.0 15.24861 30 ATACCGT 1460 0.0 15.2191105 6 ACCGTCG 1405 0.0 15.188545 8 AACGAAT 320 0.0 15.124934 31 CGACGGT 1535 0.0 15.048794 7 TACGAAT 1960 0.0 15.040749 41 >>END_MODULE