SRR4062371_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4062371_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1070625
Sequences flagged as poor quality	0
Sequence length	25
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTCCTAAAGTGTGTATTTCTCATTT	2492	0.23276123759486284	No Hit
GTATCAACGCAGAGTACTTTTTTTT	2342	0.21875072971395212	No Hit
GTCCTACAGTGGACATTTCTAAATT	2161	0.20184471687098657	No Hit
CTTTAGGACGTGAAATATGGCGAGG	2002	0.18699357851722126	No Hit
CTGTAGGACGTGGAATATGGCAAGA	1996	0.18643315820198483	No Hit
GTACATGGAAGCAGTGGTATCAACG	1878	0.17541155866900174	No Hit
GTCCTACAGTGTGCATTTCTCATTT	1731	0.16168126094570928	No Hit
TCCATGTACTCTGCGTTGATACCAC	1681	0.1570110916520724	No Hit
TATCAACGCAGAGTACTTTTTTTTT	1558	0.14552247518972564	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	1325	0.12375948628137771	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1193	0.1114302393461763	No Hit
GAGTACTTTTTTTTTTTTTTTTTTT	1079	0.10078225335668417	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAACGT	45	6.770493E-4	14.774722	4
CTAGACA	60	2.5717913E-5	14.247053	4
GCGTTAT	75	9.748637E-7	13.922637	1
ATTCGAA	55	1.9720566E-4	13.807574	1
CGCCAGT	105	1.3606041E-9	13.576878	18
GGCGGGT	70	7.241426E-6	13.574336	15
CGTCTTA	80	1.9929357E-6	13.065299	15
AATGTCC	240	0.0	13.062855	8
GTCTTAC	95	7.4525815E-8	12.990022	1
TTAGGCA	110	2.750312E-9	12.951867	4
TCGAACG	60	4.1102635E-4	12.65931	3
GTTATTC	105	2.006891E-8	12.65931	3
GTATTAA	60	4.1167534E-4	12.656943	1
CGTTATT	85	3.97196E-6	12.2852545	2
CGGGTCA	70	1.08620734E-4	12.21919	17
TTAGTAC	55	0.003080744	12.083886	3
GTTTAGA	55	0.0030850624	12.081628	1
TATACAG	95	1.039587E-6	11.999204	5
ATGTCCA	270	0.0	11.963286	9
CGGTTCT	120	9.986252E-9	11.875877	12