##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062371_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1070625 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.119205137186224 32.0 32.0 32.0 32.0 32.0 2 31.052378750729712 32.0 32.0 32.0 32.0 32.0 3 31.28627577349679 32.0 32.0 32.0 32.0 32.0 4 31.468478692352598 32.0 32.0 32.0 32.0 32.0 5 31.32339801517805 32.0 32.0 32.0 32.0 32.0 6 34.91949842381786 36.0 36.0 36.0 36.0 36.0 7 34.93434862813777 36.0 36.0 36.0 36.0 36.0 8 34.848356800934035 36.0 36.0 36.0 32.0 36.0 9 35.039476007005256 36.0 36.0 36.0 36.0 36.0 10 34.85660058377116 36.0 36.0 36.0 32.0 36.0 11 35.05515002918856 36.0 36.0 36.0 36.0 36.0 12 34.934062813777 36.0 36.0 36.0 32.0 36.0 13 34.99667483946293 36.0 36.0 36.0 36.0 36.0 14 34.95090437828371 36.0 36.0 36.0 32.0 36.0 15 34.89803058960887 36.0 36.0 36.0 32.0 36.0 16 34.922616228838294 36.0 36.0 36.0 32.0 36.0 17 34.90740268534734 36.0 36.0 36.0 32.0 36.0 18 34.923338237011095 36.0 36.0 36.0 32.0 36.0 19 34.90214500875657 36.0 36.0 36.0 32.0 36.0 20 34.87516263864565 36.0 36.0 36.0 32.0 36.0 21 34.868609457092816 36.0 36.0 36.0 32.0 36.0 22 34.85625685931115 36.0 36.0 36.0 32.0 36.0 23 34.808341856392296 36.0 36.0 36.0 32.0 36.0 24 34.78572422650321 36.0 36.0 36.0 32.0 36.0 25 34.768822883829536 36.0 36.0 36.0 32.0 36.0 26 34.72258914185639 36.0 36.0 36.0 32.0 36.0 27 34.69314279042615 36.0 36.0 36.0 32.0 36.0 28 34.66501436077058 36.0 36.0 36.0 32.0 36.0 29 34.64157104495038 36.0 36.0 36.0 32.0 36.0 30 34.616114886164624 36.0 36.0 36.0 32.0 36.0 31 34.620707530647984 36.0 36.0 36.0 32.0 36.0 32 34.57594302393462 36.0 36.0 36.0 32.0 36.0 33 34.56031850554582 36.0 36.0 36.0 32.0 36.0 34 34.5380389959136 36.0 36.0 36.0 32.0 36.0 35 34.500187273788676 36.0 36.0 36.0 32.0 36.0 36 34.45809223584355 36.0 36.0 36.0 32.0 36.0 37 34.442315469935785 36.0 36.0 36.0 32.0 36.0 38 34.3887887915937 36.0 36.0 36.0 32.0 36.0 39 34.34501903093987 36.0 36.0 36.0 32.0 36.0 40 34.346843199065965 36.0 36.0 36.0 32.0 36.0 41 34.30078038528897 36.0 36.0 36.0 32.0 36.0 42 34.27387180385289 36.0 36.0 36.0 32.0 36.0 43 34.261054991243434 36.0 36.0 36.0 32.0 36.0 44 34.202403269118506 36.0 36.0 36.0 32.0 36.0 45 34.160033625218915 36.0 36.0 36.0 32.0 36.0 46 34.12741903093987 36.0 36.0 36.0 32.0 36.0 47 34.10465755983655 36.0 36.0 36.0 32.0 36.0 48 34.05320537069469 36.0 36.0 36.0 32.0 36.0 49 34.023373263280796 36.0 36.0 36.0 32.0 36.0 50 33.43888849970811 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 1.0 21 19.0 22 66.0 23 240.0 24 681.0 25 1596.0 26 3490.0 27 6790.0 28 12161.0 29 19404.0 30 29112.0 31 43579.0 32 66584.0 33 111982.0 34 232558.0 35 542362.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.0153089344466 19.66602085407936 12.213517972210752 26.10515223926329 2 14.885894054086368 21.406540729172114 39.3984965215247 24.309068695216816 3 18.83805645327007 25.402383665539595 29.431731146438512 26.327828734751822 4 12.10013973159578 17.06771004573034 37.783386137430135 33.04876408524375 5 13.53555166374781 37.57664915353182 34.40569760653824 14.482101576182135 6 32.33976852729673 37.211511428392626 17.426302255789388 13.022417788521262 7 28.25826036193812 31.381202568593114 21.89748978400467 18.4630472854641 8 25.905896088733215 35.8800700525394 20.221179217746645 17.992854640980735 9 26.912691185055458 14.573543490951547 19.729503794512553 38.784261529480446 10 15.662346760070053 27.745382370110917 32.75161704611792 23.840653823701107 11 35.95283129013427 21.321004086398133 24.336252189141856 18.389912434325744 12 24.608709865732635 24.150005837711618 30.412702860478692 20.828581436077055 13 29.510799766491537 20.913485113835375 25.873858727378867 23.70185639229422 14 21.958388791593695 21.813333333333336 25.999112667834208 30.22916520723876 15 23.666176298890836 30.57597197898424 22.851231757151197 22.90661996497373 16 23.579217746643316 26.66134267367192 26.891955633391714 22.867483946293053 17 22.133053123175713 27.522148277875075 27.272107413893753 23.072691185055458 18 22.846374781085814 25.703304144775245 29.771395213076474 21.678925861062464 19 24.76114419147694 25.67406888499708 26.375901926444833 23.188884997081143 20 24.587974314068887 26.207495621716287 26.94267367192061 22.26185639229422 21 24.79187390542907 25.40516053706947 25.400116754232343 24.40284880326912 22 24.447122008172798 27.219988324576764 25.881891418563924 22.450998248686517 23 22.72177466433158 26.75689433741973 27.002638645650904 23.518692352597782 24 24.038108581436077 26.522078225335665 26.886258026853472 22.55355516637478 25 23.525697606538237 26.431757151196734 27.141436077057797 22.901109165207238 26 21.81529480443666 27.42528896672504 28.12086398131932 22.638552247518973 27 23.271079976649155 26.99843549328663 26.95687098657326 22.77361354349095 28 22.264845300642147 27.0122591943958 26.908114419147694 23.81478108581436 29 22.939871570344426 26.209643899591363 26.66246351430239 24.18802101576182 30 22.719813193228255 26.508628137769996 27.308067717454758 23.463490951546994 31 23.708768242848805 25.956614127262114 26.598015178050204 23.736602451838877 32 22.639299474605952 27.222043199065965 26.753064798598945 23.38559252772913 33 22.345732632807938 26.75754816112084 27.88165791009924 23.01506129597198 34 23.087542323409224 26.791546993578518 28.032784588441327 22.088126094570928 35 23.376999416228838 27.048593111500292 27.193274956217163 22.381132516053707 36 22.14342089900759 26.993485113835376 27.540922358435495 23.32217162872154 37 23.244273204903678 26.690858143607706 26.122778750729715 23.942089900758905 38 22.962661996497374 27.3020899007589 26.482755399883246 23.25249270286048 39 23.771255107997664 25.805861062463514 26.527215411558668 23.89566841798015 40 24.685113835376534 25.999673088149443 27.0780151780502 22.23719789842382 41 23.390262697022767 25.595890251021597 28.213706946876826 22.80014010507881 42 23.739591360186807 27.406795096322238 27.03887915936953 21.814734384121422 43 22.19638061879743 26.718785755983653 27.668791593695268 23.41604203152364 44 21.879929947460596 26.9235259778167 27.288546409807356 23.907997664915353 45 22.149025102159953 27.12210157618214 27.253426736719206 23.4754465849387 46 22.5901903936396 25.63701168664256 27.26624846818304 24.506549451534806 47 23.73529480443666 25.740478692352596 27.18290718038529 23.341319322825452 48 22.688709865732633 26.775481611208406 26.51058960887332 24.02521891418564 49 22.797991827203738 26.064401634559253 27.283876240513717 23.853730297723292 50 22.095318155283127 27.665055458260362 26.159953298307066 24.079673088149445 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 17.0 1 25.5 2 34.0 3 91.0 4 148.0 5 150.5 6 153.0 7 165.5 8 178.0 9 250.0 10 322.0 11 463.0 12 604.0 13 984.0 14 1364.0 15 1954.5 16 2545.0 17 3242.0 18 3939.0 19 4480.0 20 5021.0 21 5804.5 22 6588.0 23 6990.5 24 7393.0 25 9344.5 26 11296.0 27 15365.0 28 19434.0 29 23233.0 30 27032.0 31 30298.0 32 33564.0 33 40404.5 34 47245.0 35 54551.0 36 61857.0 37 65595.0 38 69333.0 39 66843.0 40 64353.0 41 63445.5 42 62538.0 43 60154.0 44 57770.0 45 60289.0 46 62808.0 47 65203.0 48 67598.0 49 67168.0 50 66738.0 51 63181.0 52 59624.0 53 57588.0 54 55552.0 55 55347.0 56 55142.0 57 54048.5 58 52955.0 59 48053.5 60 43152.0 61 38363.5 62 33575.0 63 29397.5 64 25220.0 65 21807.5 66 18395.0 67 16381.0 68 14367.0 69 13120.5 70 11874.0 71 9370.5 72 6867.0 73 6137.5 74 5408.0 75 4121.0 76 2834.0 77 2451.5 78 2069.0 79 1784.5 80 1500.0 81 1212.5 82 925.0 83 773.5 84 622.0 85 507.0 86 392.0 87 281.5 88 171.0 89 120.0 90 69.0 91 46.0 92 23.0 93 17.5 94 12.0 95 7.5 96 3.0 97 2.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.012983070636310568 2 0.0038295388207822533 3 4.670169293636894E-4 4 9.340338587273788E-5 5 0.0 6 1.8680677174547577E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 9.340338587273788E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1070625.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.90944078079177 #Duplication Level Percentage of deduplicated Percentage of total 1 82.73536151077504 51.22099963928726 2 11.431570998026341 14.154443354674568 3 2.8320682780073643 5.2599529003336745 4 1.0268212030483024 2.542797058503209 5 0.4959169098614897 1.5350969281631572 6 0.2778525067786994 1.0321015988526259 7 0.1931890075136503 0.8372156394116389 8 0.1310205705726807 0.6489128203947939 9 0.10344353335121376 0.5763718171946544 >10 0.6041702253456881 7.450624974202122 >50 0.08704049300104284 3.8406267744017617 >100 0.07774845327955815 9.229153203338756 >500 0.003492605603898366 1.4643150637938738 >1k 3.0370483512159706E-4 0.20738822744795107 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 1162 0.10853473438412141 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 5.604203152364273E-4 13 0.0 0.0 0.0 0.0 6.538237011091652E-4 14 0.0 0.0 0.0 0.0 6.538237011091652E-4 15 0.0 0.0 0.0 0.0 7.472270869819031E-4 16 0.0 0.0 0.0 9.340338587273788E-5 7.472270869819031E-4 17 0.0 0.0 0.0 9.340338587273788E-5 7.472270869819031E-4 18 0.0 0.0 0.0 1.8680677174547577E-4 8.40630472854641E-4 19 0.0 0.0 0.0 2.8021015761821365E-4 8.40630472854641E-4 20 0.0 0.0 0.0 3.7361354349095153E-4 9.340338587273788E-4 21 0.0 0.0 0.0 3.7361354349095153E-4 9.340338587273788E-4 22 0.0 0.0 0.0 7.472270869819031E-4 9.340338587273788E-4 23 0.0 0.0 0.0 0.0015878575598365441 9.340338587273788E-4 24 0.0 0.0 0.0 0.0032691185055458262 9.340338587273788E-4 25 0.0 0.0 0.0 0.004016345592527729 9.340338587273788E-4 26 0.0 0.0 0.0 0.0053239929947460594 9.340338587273788E-4 27 0.0 0.0 0.0 0.007472270869819031 9.340338587273788E-4 28 0.0 0.0 0.0 0.011768826619964973 9.340338587273788E-4 29 0.0 0.0 0.0 0.023350846468184472 9.340338587273788E-4 30 0.0 0.0 0.0 0.04595446584938704 9.340338587273788E-4 31 0.0 0.0 0.0 0.09956800934033859 9.340338587273788E-4 32 0.0 0.0 0.0 0.16607122008172795 0.0010274372446001168 33 0.0 0.0 0.0 0.24079392877991826 0.0010274372446001168 34 0.0 0.0 0.0 0.321774664331582 0.0012142440163455926 35 0.0 0.0 0.0 0.4210624635143024 0.0012142440163455926 36 0.0 0.0 0.0 0.5513601868067718 0.0012142440163455926 37 0.0 0.0 0.0 0.757594862813777 0.0012142440163455926 38 0.0 0.0 0.0 1.0181903093987157 0.0013076474022183304 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTACGCA 25 0.0023526729 35.2 4 TACCGTC 215 0.0 21.48837 7 CGTCGTA 205 0.0 20.390244 10 TGTAGGA 1815 0.0 20.363636 2 CTGTAGG 1770 0.0 20.259888 1 TAGGACC 1050 0.0 20.114286 4 ATACCGT 210 0.0 19.90476 6 ATTTCGT 785 0.0 19.617834 42 GTCCTAA 920 0.0 19.608696 1 TTAGGAC 1050 0.0 19.276192 3 GATTTCG 755 0.0 19.231789 41 GACGTGA 975 0.0 18.953844 7 TAGGACG 1720 0.0 18.802324 4 GTAGGAC 1960 0.0 18.632652 3 CCGTCGT 225 0.0 18.577778 9 TAGGACA 450 0.0 18.577778 4 AGGACGT 1780 0.0 18.415731 5 CCGGTCC 360 0.0 18.333334 9 GTCCTAC 1560 0.0 18.192308 1 GTCGTAG 230 0.0 18.173914 11 >>END_MODULE