##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062370_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1702202 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.146736991261907 32.0 32.0 32.0 32.0 32.0 2 30.80777369548385 32.0 32.0 32.0 32.0 32.0 3 30.799505581593724 32.0 32.0 32.0 32.0 32.0 4 30.873550260192385 32.0 32.0 32.0 32.0 32.0 5 30.66180335823833 32.0 32.0 32.0 32.0 32.0 6 34.29050782457076 36.0 36.0 36.0 32.0 36.0 7 34.17650137880228 36.0 36.0 36.0 32.0 36.0 8 34.17136215325796 36.0 36.0 36.0 32.0 36.0 9 34.33711627644663 36.0 36.0 36.0 32.0 36.0 10 34.01509045342445 36.0 36.0 36.0 32.0 36.0 11 34.321520007613664 36.0 36.0 36.0 32.0 36.0 12 34.109396534606354 36.0 36.0 36.0 32.0 36.0 13 34.23023589444731 36.0 36.0 36.0 32.0 36.0 14 34.136856847777175 36.0 36.0 36.0 32.0 36.0 15 34.07600273058074 36.0 36.0 36.0 32.0 36.0 16 34.07811235094307 36.0 36.0 36.0 32.0 36.0 17 33.9994524739132 36.0 36.0 36.0 32.0 36.0 18 34.013298069206826 36.0 36.0 36.0 32.0 36.0 19 34.004694507467384 36.0 36.0 36.0 32.0 36.0 20 33.983345689877 36.0 36.0 36.0 32.0 36.0 21 33.974409030185605 36.0 36.0 36.0 32.0 36.0 22 33.915719168465316 36.0 36.0 36.0 32.0 36.0 23 33.872510430606944 36.0 36.0 36.0 32.0 36.0 24 33.854371572821556 36.0 36.0 36.0 32.0 36.0 25 33.37327884704636 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 7.0 4 67.0 5 145.0 6 314.0 7 80.0 8 290.0 9 304.0 10 223.0 11 61.0 12 119.0 13 86.0 14 270.0 15 370.0 16 592.0 17 735.0 18 1110.0 19 1587.0 20 2273.0 21 3417.0 22 5193.0 23 7658.0 24 10465.0 25 14618.0 26 20392.0 27 26349.0 28 35679.0 29 47856.0 30 62229.0 31 85198.0 32 122683.0 33 175711.0 34 386360.0 35 689761.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.40874509635728 17.23179857712842 11.301012719360347 26.058443607153958 2 16.746066576074984 19.891160730913914 37.162330074500204 26.2004426185109 3 19.15197368923523 24.132007376696198 28.01223417661653 28.703784757452045 4 12.77741479843287 15.393275063397347 35.64382090337986 36.18548923478993 5 14.68084543710203 36.44847070853694 33.5973977509469 15.27328610341413 6 34.24661881987983 34.92023935540257 17.03987826517292 13.793263559544682 7 30.085924511530678 30.28721455496323 21.116818770766855 18.51004216273924 8 28.130529145672206 32.64792752405408 19.69509251478996 19.526450815483752 9 27.394386033828695 14.61938748927527 18.56597054176132 39.42025593513472 10 15.771899125064333 26.778501580766118 31.87747959708845 25.572119697081096 11 37.00598950322356 21.313408711395113 22.3150315179741 19.365570267407232 12 24.67654093814599 23.55824380877531 28.9371294648057 22.828085788272997 13 29.330341387666753 19.805719596263792 25.375973460696894 25.48796555537256 14 23.548822752972235 19.642037847897846 25.247284226278005 31.56185517285191 15 25.096250777828622 27.098490453734343 22.66630828715374 25.138950481283295 16 25.691663804339132 25.77347539888299 24.015614192753056 24.519246604024826 17 23.96474729246124 25.809555853059997 25.546978120875163 24.678718733603596 18 24.67276689991088 24.88924576527926 26.5654863274184 23.87250100739146 19 25.358881791223535 25.388588844383868 25.422178403501782 23.83035096089081 20 25.356626919891585 24.525438563469358 25.558321412437884 24.559613104201176 21 26.135081491974336 24.497359290602745 24.580186620327286 24.78737259709563 22 25.355419981889955 24.755340787204585 25.02487336793345 24.86436586297201 23 24.176275438314715 24.56921580774573 25.564127409399855 25.69038134453969 24 24.458891139362628 25.384186849847257 25.21694063553561 24.9399813752545 25 24.76665284260869 24.754828861103512 25.278201813598756 25.200316482689043 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 255.0 1 255.0 2 623.0 3 991.0 4 991.0 5 991.0 6 2548.0 7 4105.0 8 4105.0 9 4105.0 10 4222.0 11 4339.0 12 4339.0 13 4339.0 14 4766.0 15 5193.0 16 5193.0 17 5193.0 18 8512.5 19 11832.0 20 11832.0 21 11832.0 22 18729.5 23 25627.0 24 25627.0 25 25627.0 26 37745.0 27 49863.0 28 49863.0 29 49863.0 30 62366.5 31 74870.0 32 74870.0 33 74870.0 34 90724.0 35 106578.0 36 106578.0 37 106578.0 38 121757.5 39 136937.0 40 136937.0 41 136937.0 42 156895.0 43 176853.0 44 176853.0 45 176853.0 46 203180.0 47 229507.0 48 229507.0 49 229507.0 50 228509.5 51 227512.0 52 227512.0 53 227512.0 54 212291.5 55 197071.0 56 197071.0 57 197071.0 58 179729.0 59 162387.0 60 162387.0 61 162387.0 62 142259.0 63 122131.0 64 122131.0 65 122131.0 66 100916.5 67 79702.0 68 79702.0 69 79702.0 70 60633.0 71 41564.0 72 41564.0 73 41564.0 74 31904.0 75 22244.0 76 22244.0 77 22244.0 78 17688.5 79 13133.0 80 13133.0 81 13133.0 82 9240.5 83 5348.0 84 5348.0 85 5348.0 86 3883.0 87 2418.0 88 2418.0 89 2418.0 90 1609.5 91 801.0 92 801.0 93 801.0 94 489.5 95 178.0 96 178.0 97 178.0 98 470.5 99 763.0 100 763.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00887086256507747 2 0.003466098618142853 3 0.00499353190749394 4 0.013981889340983033 5 0.0350722182208692 6 0.046939199930443036 7 0.06896948775762218 8 0.0913522601900362 9 0.09945940611043812 10 0.12201842084546959 11 0.12107846189817659 12 0.13488410893654218 13 0.12231215801649864 14 0.1253670245952008 15 0.11490998130656643 16 0.11479248643815482 17 0.1253670245952008 18 0.13318043334457366 19 0.13329792821298528 20 0.12372209643743809 21 0.13394414998924922 22 0.1523320968956681 23 0.14410745610685452 24 0.13588281531804097 25 0.13318043334457366 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1702202.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.27070802094255 #Duplication Level Percentage of deduplicated Percentage of total 1 79.25589207902344 43.80529270039039 2 12.642394049627697 13.97508140405348 3 3.616575603417165 5.996720826364028 4 1.4755422546520924 3.2621706051775625 5 0.7761264806077869 2.144853004849736 6 0.4643304105561138 1.5398322328254808 7 0.3003764197802704 1.162141217583598 8 0.22305486222720675 0.986272013024921 9 0.1703678856593235 0.8474718297979615 >10 0.9044375401256028 9.192584641465043 >50 0.08293887177917904 3.2180283624232837 >100 0.07826120934950638 9.014382476152 >500 0.007356714180509745 2.718870892459168 >1k 0.0023456190140755707 2.13629779343339 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 3689 0.216719284785237 No Hit GTATCAACGCAGAGTACTTTTTTTT 3599 0.211432015706714 No Hit TCCATGTACTCTGCGTTGATACCAC 3131 0.18393821649839442 No Hit TATCAACGCAGAGTACTTTTTTTTT 2358 0.13852644985730247 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2253 0.13235796926569232 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1749486841162212E-4 2 0.0 0.0 0.0 0.0 1.1749486841162212E-4 3 0.0 0.0 0.0 0.0 1.1749486841162212E-4 4 0.0 0.0 0.0 0.0 1.1749486841162212E-4 5 0.0 0.0 0.0 0.0 1.1749486841162212E-4 6 0.0 0.0 0.0 0.0 1.7624230261743318E-4 7 0.0 0.0 0.0 0.0 1.7624230261743318E-4 8 0.0 0.0 0.0 0.0 1.7624230261743318E-4 9 0.0 0.0 0.0 0.0 1.7624230261743318E-4 10 0.0 0.0 0.0 0.0 1.7624230261743318E-4 11 0.0 0.0 0.0 0.0 1.7624230261743318E-4 12 0.0 0.0 0.0 0.0 4.1123203944067743E-4 13 0.0 0.0 0.0 0.0 4.699794736464885E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATAC 55 1.1348566E-5 15.536145 1 TACACCG 55 1.9609916E-4 13.817626 5 AACCGCG 175 0.0 12.486681 7 CGTCTTA 140 5.2750693E-11 12.21595 15 CGCAATC 110 3.8118742E-8 12.091489 12 CGCATCG 230 0.0 11.978836 13 CAACGGA 105 2.7175156E-7 11.7628145 14 CGATAAC 105 2.7185524E-7 11.762468 10 AGCTCGC 65 8.02087E-4 11.692869 10 CGCAAGA 245 0.0 11.626713 2 CGGTCCA 320 0.0 11.578681 10 ATTTGCG 230 0.0 11.567473 16 GTATTAC 115 7.133167E-8 11.558292 1 TCTCGTC 165 7.2759576E-12 11.515704 12 TTGCGCG 240 0.0 11.482082 18 AAGACGG 240 0.0 11.478704 5 GAACCGC 200 0.0 11.400883 6 TTTGCGC 245 0.0 11.247753 17 CAAGACG 245 0.0 11.243122 4 ACGGAAT 220 0.0 11.2301235 18 >>END_MODULE