##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062367_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1605030 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.0825704192445 32.0 32.0 32.0 32.0 32.0 2 30.907473380559864 32.0 32.0 32.0 32.0 32.0 3 31.204021108639715 32.0 32.0 32.0 32.0 32.0 4 31.42951035183143 32.0 32.0 32.0 32.0 32.0 5 31.244306336953205 32.0 32.0 32.0 32.0 32.0 6 34.86211036553834 36.0 36.0 36.0 32.0 36.0 7 34.87737425468683 36.0 36.0 36.0 32.0 36.0 8 34.7921116739251 36.0 36.0 36.0 32.0 36.0 9 35.018670056011416 36.0 36.0 36.0 36.0 36.0 10 34.78029943365544 36.0 36.0 36.0 32.0 36.0 11 35.027458053743544 36.0 36.0 36.0 36.0 36.0 12 34.89199142695152 36.0 36.0 36.0 32.0 36.0 13 34.9772695837461 36.0 36.0 36.0 32.0 36.0 14 34.9185840763101 36.0 36.0 36.0 32.0 36.0 15 34.844256493648096 36.0 36.0 36.0 32.0 36.0 16 34.87018186575952 36.0 36.0 36.0 32.0 36.0 17 34.83607783032093 36.0 36.0 36.0 32.0 36.0 18 34.85449493155891 36.0 36.0 36.0 32.0 36.0 19 34.84656984604649 36.0 36.0 36.0 32.0 36.0 20 34.843007295813784 36.0 36.0 36.0 32.0 36.0 21 34.84625334105905 36.0 36.0 36.0 32.0 36.0 22 34.81444770502732 36.0 36.0 36.0 32.0 36.0 23 34.77122919820813 36.0 36.0 36.0 32.0 36.0 24 34.74207024167772 36.0 36.0 36.0 32.0 36.0 25 34.70972941315738 36.0 36.0 36.0 32.0 36.0 26 34.6582319333595 36.0 36.0 36.0 32.0 36.0 27 34.63819056341626 36.0 36.0 36.0 32.0 36.0 28 34.62565559522252 36.0 36.0 36.0 32.0 36.0 29 34.58976280817181 36.0 36.0 36.0 32.0 36.0 30 34.576211036553836 36.0 36.0 36.0 32.0 36.0 31 34.58462396341501 36.0 36.0 36.0 32.0 36.0 32 34.535984997165166 36.0 36.0 36.0 32.0 36.0 33 34.523438814227774 36.0 36.0 36.0 32.0 36.0 34 34.50606468414921 36.0 36.0 36.0 32.0 36.0 35 34.4931540220432 36.0 36.0 36.0 32.0 36.0 36 34.442202326436266 36.0 36.0 36.0 32.0 36.0 37 34.45554164096621 36.0 36.0 36.0 32.0 36.0 38 34.41078609122571 36.0 36.0 36.0 32.0 36.0 39 34.40131461717227 36.0 36.0 36.0 32.0 36.0 40 34.39783119318642 36.0 36.0 36.0 32.0 36.0 41 34.358628810676436 36.0 36.0 36.0 32.0 36.0 42 34.32701320224544 36.0 36.0 36.0 32.0 36.0 43 34.3271147579796 36.0 36.0 36.0 32.0 36.0 44 34.28305576842801 36.0 36.0 36.0 32.0 36.0 45 34.25008504513934 36.0 36.0 36.0 32.0 36.0 46 34.25614162975147 36.0 36.0 36.0 32.0 36.0 47 34.24210139374342 36.0 36.0 36.0 32.0 36.0 48 34.19874145654598 36.0 36.0 36.0 32.0 36.0 49 34.18469685924874 36.0 36.0 36.0 32.0 36.0 50 33.55205385569117 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 1.0 19 3.0 20 3.0 21 46.0 22 118.0 23 359.0 24 1007.0 25 2394.0 26 4968.0 27 9734.0 28 16688.0 29 27389.0 30 41782.0 31 64618.0 32 101515.0 33 178004.0 34 375322.0 35 781077.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.6708764216335 18.496252595267826 11.962097250573887 26.870773732524782 2 16.838600380441115 20.429488485519126 35.6516814238691 27.080229710170663 3 18.39225979939228 23.729628796596685 28.879523844829635 28.998587559181395 4 12.968675332346018 15.868498326198468 36.02146752488584 35.14135881656967 5 15.350180370460365 35.76437823592082 32.97857360921603 15.906867784402785 6 34.688139202642695 35.50800079998655 16.2746171871252 13.52924281024556 7 30.483417755431365 30.27183292524127 20.718740459679882 18.526008859647483 8 28.44825330367657 32.24363407537554 19.309607920101183 19.998504700846713 9 27.550949203441682 13.948711239042261 18.47535560082989 40.024983956686164 10 16.144059612592912 26.07702036722055 31.17748577908201 26.601434241104528 11 37.91686136707725 20.779486987782157 22.005196164557674 19.29845548058292 12 24.661408197977607 23.516445175479586 28.198849865734598 23.62329676080821 13 29.452720509897013 19.019519884363532 25.15074484589073 26.377014759848727 14 23.752951658224458 19.35602449798446 24.491380223422617 32.399643620368465 15 25.507996735263518 26.808346261440597 21.772614842090178 25.91104216120571 16 26.451966629907233 25.347252076285177 23.09321321096802 25.10756808283957 17 24.597048030254886 25.39460321613926 24.77118807748142 25.237160676124432 18 25.596530905964375 24.268082216531777 25.56076833454826 24.574618542955584 19 25.933471648505012 24.869690909204188 24.88439468421151 24.31244275807929 20 26.046865167629264 23.893198257976486 24.3792327869261 25.680703787468147 21 27.097188214550506 24.004286524239422 23.88846314399108 25.010062117218997 22 26.230724659352163 24.10764907821038 24.287957234444217 25.373669027993245 23 24.832619951028953 23.721363463611272 25.03616754827013 26.40984903708965 24 25.0262611913796 24.779910655875593 24.5511298854227 25.642698267322107 25 25.165137100241118 24.177741226020697 24.883273209846546 25.773848463891643 26 24.986511155554723 24.788197105350054 25.176414148022154 25.048877591073065 27 25.94144657732254 24.311508196108484 24.240793006984294 25.50625221958468 28 24.875547497554564 24.181853298692236 25.379401008080848 25.563198195672353 29 24.956605172488988 24.590132271670935 25.016354834489075 25.436907721351005 30 25.053176576138764 24.611128763948336 25.220089344124407 25.115605315788493 31 25.461455549117463 24.426957751568505 24.265465443013525 25.846121256300503 32 25.238157542226624 24.42378024086777 24.283533641115742 26.05452857578986 33 25.001651059481755 23.990268094677358 24.85785312424067 26.150227721600217 34 25.504383095643075 24.16066989402067 25.206008610430956 25.128938399905298 35 26.25184575989234 24.036809280823412 24.79567360111649 24.91567135816776 36 25.056852519890594 24.522033856064994 24.707264038678407 25.713849585366006 37 26.12810975495785 24.31082285066323 24.31979464558295 25.24127274879597 38 25.043083306854076 24.095873597378244 25.03560681108764 25.825436284680038 39 25.4326087362853 24.23325420708647 24.39113287602101 25.943004180607215 40 25.84275683320561 24.199734584400293 25.046198513423423 24.911310068970675 41 24.699662934649197 24.612312542444688 25.30980729332162 25.378217229584493 42 25.990168408067138 24.681968561335303 24.764646143685788 24.56321688691177 43 25.244637171890865 23.60628773293957 25.138346323744727 26.010728771424834 44 24.915795966430533 24.137305844750564 24.91610748708747 26.030790701731434 45 25.034859161510997 24.534307769948224 24.916792832532725 25.51404023600805 46 24.812012742448893 24.17501490627272 25.146274615598845 25.866697735679544 47 24.96451779717513 23.98484763524669 25.520146040883972 25.530488526694207 48 25.6785231428696 24.742278960517872 24.535616156707352 25.043581739905175 49 24.577422228867995 24.754303657875553 25.058472427306654 25.609801685949797 50 24.552313663919055 24.86352280019688 24.8767935801823 25.707369955701765 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 13.0 1 15.5 2 18.0 3 61.0 4 104.0 5 107.0 6 110.0 7 148.0 8 186.0 9 244.0 10 302.0 11 368.5 12 435.0 13 856.5 14 1278.0 15 1647.0 16 2016.0 17 2471.0 18 2926.0 19 3300.0 20 3674.0 21 4581.0 22 5488.0 23 6046.0 24 6604.0 25 8551.0 26 10498.0 27 13212.0 28 15926.0 29 18276.0 30 20626.0 31 21712.0 32 22798.0 33 26178.5 34 29559.0 35 34731.5 36 39904.0 37 49113.0 38 58322.0 39 63116.0 40 67910.0 41 75218.5 42 82527.0 43 83504.0 44 84481.0 45 92791.0 46 101101.0 47 107913.0 48 114725.0 49 118259.5 50 121794.0 51 116987.5 52 112181.0 53 110671.5 54 109162.0 55 111319.5 56 113477.0 57 111920.0 58 110363.0 59 101372.5 60 92382.0 61 82321.0 62 72260.0 63 63986.5 64 55713.0 65 48087.5 66 40462.0 67 36511.5 68 32561.0 69 29833.0 70 27105.0 71 21358.5 72 15612.0 73 13732.0 74 11852.0 75 8911.5 76 5971.0 77 5288.5 78 4606.0 79 3892.0 80 3178.0 81 2553.5 82 1929.0 83 1652.0 84 1375.0 85 1128.0 86 881.0 87 636.5 88 392.0 89 275.5 90 159.0 91 101.5 92 44.0 93 31.0 94 18.0 95 15.5 96 13.0 97 10.0 98 7.0 99 4.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.011588568437973122 2 0.003177510700734566 3 4.3612891970866587E-4 4 6.230413138695227E-5 5 0.0 6 1.869123941608568E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 6.230413138695227E-5 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1605030.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.10385719583093 #Duplication Level Percentage of deduplicated Percentage of total 1 83.56956739775268 46.885750752008846 2 9.999730071824306 11.220468558929742 3 2.5662159653289436 4.319238421574294 4 1.0635245279894554 2.386713129703356 5 0.6178679517973682 1.7332387666760047 6 0.42271944172499976 1.4229714715464459 7 0.2972265103917443 1.1672887585683507 8 0.1965040698868682 0.8819709020265949 9 0.1658319372416761 0.8373430192963494 >10 0.9097556341620047 9.433241760063634 >50 0.0934165946921372 3.6720046592560305 >100 0.08614642025535414 10.561420490539337 >500 0.00881538523541196 3.4145228348178263 >1k 0.0026780917170871775 2.0638264749932063 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1855 0.11557416372279647 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1822 0.11351812738702703 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1731 0.10784845143081438 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1617 0.10074578045270181 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1609 0.1002473474016062 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.230413138695227E-5 2 0.0 0.0 0.0 0.0 6.230413138695227E-5 3 0.0 0.0 0.0 0.0 6.230413138695227E-5 4 0.0 0.0 0.0 0.0 6.230413138695227E-5 5 0.0 0.0 0.0 0.0 1.2460826277390453E-4 6 0.0 0.0 0.0 0.0 1.869123941608568E-4 7 0.0 0.0 0.0 0.0 1.869123941608568E-4 8 0.0 0.0 0.0 0.0 1.869123941608568E-4 9 0.0 0.0 0.0 6.230413138695227E-5 1.869123941608568E-4 10 0.0 0.0 0.0 1.869123941608568E-4 1.869123941608568E-4 11 0.0 0.0 0.0 1.869123941608568E-4 1.869123941608568E-4 12 0.0 0.0 0.0 1.869123941608568E-4 4.3612891970866587E-4 13 0.0 0.0 0.0 1.869123941608568E-4 4.984330510956181E-4 14 0.0 0.0 0.0 1.869123941608568E-4 4.984330510956181E-4 15 0.0 0.0 0.0 1.869123941608568E-4 4.984330510956181E-4 16 0.0 0.0 0.0 1.869123941608568E-4 4.984330510956181E-4 17 0.0 0.0 0.0 1.869123941608568E-4 4.984330510956181E-4 18 0.0 0.0 0.0 3.1152065693476134E-4 4.984330510956181E-4 19 0.0 0.0 0.0 3.1152065693476134E-4 4.984330510956181E-4 20 0.0 0.0 0.0 3.1152065693476134E-4 5.607371824825705E-4 21 0.0 0.0 0.0 4.3612891970866587E-4 6.230413138695227E-4 22 0.0 0.0 0.0 8.099537080303795E-4 6.230413138695227E-4 23 0.0 0.0 0.0 9.968661021912363E-4 6.85345445256475E-4 24 0.0 0.0 0.0 0.00137069089051295 6.85345445256475E-4 25 0.0 0.0 0.0 0.0016822115474477112 6.85345445256475E-4 26 0.0 0.0 0.0 0.0019937322043824725 8.722578394173317E-4 27 0.0 0.0 0.0 0.0033644230948954223 8.722578394173317E-4 28 0.0 0.0 0.0 0.007538799897821224 9.345619708042841E-4 29 0.0 0.0 0.0 0.017133636131411875 9.345619708042841E-4 30 0.0 0.0 0.0 0.03482800944530632 9.345619708042841E-4 31 0.0 0.0 0.0 0.07725712291982081 9.345619708042841E-4 32 0.0 0.0 0.0 0.127910381737413 9.345619708042841E-4 33 0.0 0.0 0.0 0.18037046036522683 9.345619708042841E-4 34 0.0 0.0 0.0 0.2486557883653265 0.0010591702335781886 35 0.0 0.0 0.0 0.32011862706616073 0.0010591702335781886 36 0.0 0.0 0.0 0.42622256281814047 0.0010591702335781886 37 0.0 0.0 0.0 0.5778085144825953 0.0010591702335781886 38 0.0 0.0 0.0 0.784533622424503 0.0010591702335781886 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACTG 125 9.968062E-10 21.119986 5 GGACCGT 115 8.776624E-9 21.043465 6 GTATCAA 2420 0.0 21.000639 1 AACGAAT 55 0.00448426 19.999987 31 ATGCGTA 75 0.001291127 17.599987 22 ATTTCGT 75 0.001291127 17.599987 42 ACCGTCG 465 0.0 17.505363 8 ATACCGT 460 0.0 17.21738 6 ATAGCGT 410 0.0 17.17072 6 TAGTACG 200 7.2759576E-11 16.499989 2 TACCGTC 480 0.0 16.041656 7 GTATTAG 550 0.0 16.000486 1 TAGCGTA 400 0.0 15.949988 7 TAGACAG 320 0.0 15.812488 5 AACGCAG 3160 0.0 15.803786 6 AATACTG 265 0.0 15.773575 5 CGTATAT 405 0.0 15.753076 10 CGCTTCG 420 0.0 15.714275 32 GTTTAGA 255 0.0 15.529885 1 TCAACGC 3225 0.0 15.48526 4 >>END_MODULE