##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062364_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2659322 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.210769135892534 32.0 32.0 32.0 32.0 32.0 2 31.313721316937173 32.0 32.0 32.0 32.0 32.0 3 31.439941082727103 32.0 32.0 32.0 32.0 32.0 4 31.568062837068997 32.0 32.0 32.0 32.0 32.0 5 31.464544722301397 32.0 32.0 32.0 32.0 32.0 6 35.06892132656369 36.0 36.0 36.0 36.0 36.0 7 35.08463247399149 36.0 36.0 36.0 36.0 36.0 8 35.018374608264814 36.0 36.0 36.0 36.0 36.0 9 35.17280908442076 36.0 36.0 36.0 36.0 36.0 10 35.0205296688404 36.0 36.0 36.0 36.0 36.0 11 35.1854040240332 36.0 36.0 36.0 36.0 36.0 12 35.078548592460784 36.0 36.0 36.0 36.0 36.0 13 35.12958528527196 36.0 36.0 36.0 36.0 36.0 14 35.09309026887304 36.0 36.0 36.0 36.0 36.0 15 35.04343550724583 36.0 36.0 36.0 36.0 36.0 16 35.05360276040284 36.0 36.0 36.0 36.0 36.0 17 35.02120540498669 36.0 36.0 36.0 36.0 36.0 18 35.04273570481499 36.0 36.0 36.0 36.0 36.0 19 35.017486035914416 36.0 36.0 36.0 36.0 36.0 20 35.017620280658 36.0 36.0 36.0 36.0 36.0 21 35.00368101343124 36.0 36.0 36.0 36.0 36.0 22 34.9802765516925 36.0 36.0 36.0 36.0 36.0 23 34.93353907499731 36.0 36.0 36.0 32.0 36.0 24 34.90805400775085 36.0 36.0 36.0 32.0 36.0 25 34.87439279635937 36.0 36.0 36.0 32.0 36.0 26 34.83302435733619 36.0 36.0 36.0 32.0 36.0 27 34.80986619897854 36.0 36.0 36.0 32.0 36.0 28 34.78183913042497 36.0 36.0 36.0 32.0 36.0 29 34.756339397786356 36.0 36.0 36.0 32.0 36.0 30 34.747530009528745 36.0 36.0 36.0 32.0 36.0 31 34.741311883254454 36.0 36.0 36.0 32.0 36.0 32 34.69916317016142 36.0 36.0 36.0 32.0 36.0 33 34.67294370520005 36.0 36.0 36.0 32.0 36.0 34 34.65343722948932 36.0 36.0 36.0 32.0 36.0 35 34.61642441193658 36.0 36.0 36.0 32.0 36.0 36 34.600252244745086 36.0 36.0 36.0 32.0 36.0 37 34.57888589648038 36.0 36.0 36.0 32.0 36.0 38 34.52622134513985 36.0 36.0 36.0 32.0 36.0 39 34.50491441051516 36.0 36.0 36.0 32.0 36.0 40 34.47975687036019 36.0 36.0 36.0 32.0 36.0 41 34.44149674240276 36.0 36.0 36.0 32.0 36.0 42 34.39589301333197 36.0 36.0 36.0 32.0 36.0 43 34.395598201346054 36.0 36.0 36.0 32.0 36.0 44 34.36283872355435 36.0 36.0 36.0 32.0 36.0 45 34.29167998459758 36.0 36.0 36.0 32.0 36.0 46 34.32230922016965 36.0 36.0 36.0 32.0 36.0 47 34.272127256496205 36.0 36.0 36.0 32.0 36.0 48 34.24196693743744 36.0 36.0 36.0 32.0 36.0 49 34.24148711588894 36.0 36.0 36.0 32.0 36.0 50 33.69222907192134 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 1.0 20 16.0 21 82.0 22 242.0 23 734.0 24 2005.0 25 4646.0 26 9801.0 27 18234.0 28 30047.0 29 44995.0 30 63810.0 31 92368.0 32 138502.0 33 224877.0 34 494656.0 35 1534304.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.15453993957604 18.408284092657095 12.267575922033307 26.16960004573356 2 16.085512325235342 20.753537034745918 36.83825965443237 26.322690985586373 3 18.258318063041333 24.744829754262675 28.436022521690834 28.56082966100516 4 12.181924907786474 16.532026832453596 36.36249458037534 34.9235536793846 5 14.348694892908794 36.95708906255053 33.24486466851325 15.449351376027423 6 33.67678120653238 35.769469263984945 17.182183177797825 13.371566351684855 7 30.262744254537633 30.807846829786307 20.741536545487637 18.187872370188423 8 28.254317549479737 32.1600137779531 19.77651438092656 19.80915429164061 9 27.567252104107737 14.845212426325205 18.730977294212586 38.85655817535447 10 16.006636277968596 26.517736475688164 31.010498164569768 26.465129081773476 11 37.043163633437395 21.603589185514203 22.154519084187623 19.19872809686078 12 24.98806086664195 24.2455031771256 28.08847518277215 22.677960773460303 13 29.08049495322492 19.60646360237685 25.50198885279782 25.811052591600415 14 23.862360406148635 20.158596815278482 24.95745156096178 31.021591217611107 15 25.481645321627088 26.95175687637676 22.563909146767486 25.00268865522866 16 26.129253997823504 25.960037934481043 23.6558792053012 24.25482886239425 17 24.198160282959343 25.78717432488431 25.2951692198237 24.719496172332647 18 25.238989486794 24.653614718337984 26.49630244099812 23.611093353869897 19 25.47145475425691 25.576782352795185 25.428774702724983 23.52298819022292 20 25.4478021089586 24.208463661038415 25.47931390030993 24.864420329693058 21 26.85564215239824 24.4766523196514 24.250466848316975 24.41723867963338 22 25.49883015294876 24.800832693445923 24.89690981385481 24.80342733975051 23 23.887329176384057 24.452021981542664 25.624990129062976 26.035658713010307 24 24.22764148155056 25.63969312478895 25.086619822646522 25.046045571013963 25 24.722993304308392 24.69009018088069 25.235492354818255 25.351424159992657 26 24.167851805836225 25.495784263808595 25.852416518195238 24.483947412159942 27 25.55557393952293 25.008930847787518 24.757287759812463 24.67820745287709 28 24.212600053697898 24.781203630098197 25.980907915626617 25.02528840057729 29 24.154728160034775 25.236432444059048 25.897954441019177 24.710884954886996 30 24.54512841995065 25.07037508056565 26.252142463379762 24.13235403610394 31 24.813730717829582 25.033862014453305 24.830577117024568 25.32183015069254 32 24.46856755218059 25.080528044366197 25.018632568752487 25.432271834700725 33 24.106482780197357 24.571864557958758 25.576030281402552 25.74562238044133 34 24.609430524020784 25.124674635113763 25.9123566081881 24.35353823267735 35 25.845046218547434 24.750293495860976 25.302088276635924 24.102572008955665 36 24.27818067913551 25.263093374927898 25.430391656219143 25.028334289717453 37 25.825041119503396 25.106324093133516 24.761160927484525 24.30747385987857 38 24.403024530312614 24.887508921446898 25.514999687890374 25.19446686035012 39 24.852988844525033 25.062779159500053 24.824485338744235 25.259746657230675 40 25.21146367382363 25.150395476741817 25.423021356571336 24.21511949286322 41 23.997733256822602 25.529514665768193 25.83071925851777 24.642032818891433 42 25.80289261699035 25.500559917151815 25.134263545369834 23.562283920488003 43 24.705658058708195 24.32785499461893 25.39526992218317 25.5712170244897 44 24.512902160776317 24.984751752514363 25.30878171203036 25.19356437467896 45 24.60292510647451 25.34597164239607 25.362554816603634 24.688548434525792 46 24.39368876016755 24.819136026930202 25.564138788915507 25.223036423986745 47 24.592621728395432 24.683020709789936 25.914161579530422 24.810195982284206 48 25.36443499508521 25.817821234134115 24.60300031361377 24.2147434571669 49 24.073316431782235 25.425540795736655 25.571743474464544 24.92939929801656 50 24.02388580539386 25.97036084412557 25.01440217800039 24.991351172480183 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 19.0 1 31.0 2 43.0 3 127.5 4 212.0 5 267.0 6 322.0 7 325.0 8 328.0 9 429.5 10 531.0 11 817.5 12 1104.0 13 2083.0 14 3062.0 15 4116.0 16 5170.0 17 6337.5 18 7505.0 19 8298.5 20 9092.0 21 10458.5 22 11825.0 23 12761.0 24 13697.0 25 15975.0 26 18253.0 27 23286.0 28 28319.0 29 33252.0 30 38185.0 31 41713.5 32 45242.0 33 52176.0 34 59110.0 35 68702.0 36 78294.0 37 95180.5 38 112067.0 39 119912.0 40 127757.0 41 139511.5 42 151266.0 43 151683.5 44 152101.0 45 167258.5 46 182416.0 47 193865.5 48 205315.0 49 205530.0 50 205745.0 51 190096.5 52 174448.0 53 167654.5 54 160861.0 55 163989.5 56 167118.0 57 165813.5 58 164509.0 59 148334.5 60 132160.0 61 116223.5 62 100287.0 63 89663.5 64 79040.0 65 68143.0 66 57246.0 67 53365.0 68 49484.0 69 47385.5 70 45287.0 71 35251.0 72 25215.0 73 21888.5 74 18562.0 75 13695.5 76 8829.0 77 7838.0 78 6847.0 79 5989.0 80 5131.0 81 3923.0 82 2715.0 83 2486.5 84 2258.0 85 1817.5 86 1377.0 87 1023.0 88 669.0 89 432.5 90 196.0 91 127.0 92 58.0 93 40.5 94 23.0 95 15.5 96 8.0 97 10.0 98 12.0 99 7.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01665838134682449 2 0.003873167672060773 3 7.144678230015019E-4 4 1.8801784815828998E-4 5 0.0 6 5.640535444748699E-4 7 2.2562141778994797E-4 8 3.760356963165799E-5 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.1281070889497398E-4 47 0.0 48 0.0 49 0.0 50 7.520713926331598E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2659322.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.08198063093458 #Duplication Level Percentage of deduplicated Percentage of total 1 74.87512516546339 35.25269192779149 2 14.748565665585339 13.887833660023114 3 4.883456726510425 6.897684450287131 4 2.029797527505978 3.822675514990214 5 1.0363963977597188 2.4397797562646724 6 0.5895598469222728 1.665458717614272 7 0.3634450522627169 1.1978199037729569 8 0.24562071068861807 0.9251447634558321 9 0.16802816139000573 0.711998877601422 >10 0.8347298385830587 7.1098046411374805 >50 0.0926694545988059 3.0831756369461525 >100 0.105936706499418 10.578232079468911 >500 0.01831468114612206 6.02768206486133 >1k 0.00835406508419537 6.400018005785167 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 3527 0.13262779009085773 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 3340 0.1255959225697377 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 3199 0.12029381925167393 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 3116 0.1171727229722463 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 2919 0.10976481975480969 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2808 0.10559082352569564 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 2801 0.10532759853827404 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 2779 0.10450032000637757 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 2767 0.10404907717079766 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 2739 0.10299617722111123 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2711 0.10194327727142483 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 2706 0.10175525942326653 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.7603569631658E-5 2 0.0 0.0 0.0 0.0 3.7603569631658E-5 3 0.0 0.0 0.0 0.0 3.7603569631658E-5 4 0.0 0.0 0.0 0.0 3.7603569631658E-5 5 0.0 0.0 0.0 0.0 3.7603569631658E-5 6 0.0 0.0 0.0 0.0 3.7603569631658E-5 7 0.0 0.0 0.0 3.7603569631658E-5 3.7603569631658E-5 8 0.0 0.0 0.0 3.7603569631658E-5 3.7603569631658E-5 9 0.0 0.0 0.0 1.1281070889497398E-4 3.7603569631658E-5 10 0.0 0.0 0.0 1.1281070889497398E-4 3.7603569631658E-5 11 0.0 0.0 0.0 1.50414278526632E-4 3.7603569631658E-5 12 0.0 0.0 0.0 1.50414278526632E-4 7.5207139263316E-5 13 0.0 0.0 0.0 1.8801784815828998E-4 1.50414278526632E-4 14 0.0 0.0 0.0 2.2562141778994797E-4 1.50414278526632E-4 15 0.0 0.0 0.0 3.00828557053264E-4 1.50414278526632E-4 16 0.0 0.0 0.0 3.7603569631657996E-4 1.8801784815828998E-4 17 0.0 0.0 0.0 4.5124283557989594E-4 1.8801784815828998E-4 18 0.0 0.0 0.0 6.01657114106528E-4 1.8801784815828998E-4 19 0.0 0.0 0.0 6.01657114106528E-4 1.8801784815828998E-4 20 0.0 0.0 0.0 7.144678230015019E-4 3.3843212668492194E-4 21 0.0 0.0 0.0 9.400892407914499E-4 3.3843212668492194E-4 22 0.0 0.0 0.0 0.0013537285067396878 3.3843212668492194E-4 23 0.0 0.0 0.0 0.002369024886794454 3.3843212668492194E-4 24 0.0 0.0 0.0 0.0037603569631657996 3.3843212668492194E-4 25 0.0 0.0 0.0 0.0046628426343255916 3.3843212668492194E-4 26 0.0 0.0 0.0 0.005790949723275331 3.3843212668492194E-4 27 0.0 0.0 0.0 0.007407903217436625 3.3843212668492194E-4 28 0.0 0.0 0.0 0.011130656610970766 3.3843212668492194E-4 29 0.0 0.0 0.0 0.018087316992827496 3.3843212668492194E-4 30 0.0 0.0 0.0 0.03075971995869624 3.3843212668492194E-4 31 0.0 0.0 0.0 0.06351242910787035 3.3843212668492194E-4 32 0.0 0.0 0.0 0.10081517018247509 3.7603569631657996E-4 33 0.0 0.0 0.0 0.1366137684718135 3.7603569631657996E-4 34 0.0 0.0 0.0 0.18015870210527346 4.136392659482379E-4 35 0.0 0.0 0.0 0.23073550325985345 4.136392659482379E-4 36 0.0 0.0 0.0 0.3055666068268529 4.136392659482379E-4 37 0.0 0.0 0.0 0.4160834979742957 4.136392659482379E-4 38 0.0 0.0 0.0 0.5645423908800815 4.136392659482379E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCAATA 940 0.0 19.65944 36 GGCGTTA 810 0.0 18.46901 42 CAATACG 1040 0.0 17.76911 38 CGTCGTA 860 0.0 17.651043 10 ATACCGT 910 0.0 17.64823 6 TAGTACG 280 0.0 17.286572 2 ATACGAA 1060 0.0 17.2263 40 CCGTCGT 920 0.0 16.978144 9 TACCGTC 920 0.0 16.978144 7 AATACGA 1065 0.0 16.93885 39 CGAATGC 1055 0.0 16.890879 43 CTAGCGG 1115 0.0 16.771185 29 TAGCGGC 1130 0.0 16.743248 30 CGGTCCA 1135 0.0 16.669489 10 ACCGTCG 930 0.0 16.559027 8 CGCCGGT 1125 0.0 16.426554 7 TAGGACG 405 0.0 16.296185 4 CGGCGTT 920 0.0 16.260757 41 GCAATAC 1140 0.0 16.210417 37 TCTAGCG 1155 0.0 16.190365 28 >>END_MODULE