##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062360_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1586466 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.22070879552414 32.0 32.0 32.0 32.0 32.0 2 31.376836314172508 32.0 32.0 32.0 32.0 32.0 3 31.481357936444905 32.0 32.0 32.0 32.0 32.0 4 31.60174122861757 32.0 32.0 32.0 32.0 32.0 5 31.518949665482904 32.0 32.0 32.0 32.0 32.0 6 35.11648847186136 36.0 36.0 36.0 36.0 36.0 7 35.14056210470316 36.0 36.0 36.0 36.0 36.0 8 35.0815435061325 36.0 36.0 36.0 36.0 36.0 9 35.198383072817194 36.0 36.0 36.0 36.0 36.0 10 35.07781761474875 36.0 36.0 36.0 36.0 36.0 11 35.21059890347477 36.0 36.0 36.0 36.0 36.0 12 35.116064258546984 36.0 36.0 36.0 36.0 36.0 13 35.15763779368735 36.0 36.0 36.0 36.0 36.0 14 35.115427623409516 36.0 36.0 36.0 36.0 36.0 15 35.07362338682329 36.0 36.0 36.0 36.0 36.0 16 35.081766643596524 36.0 36.0 36.0 36.0 36.0 17 35.05314075435591 36.0 36.0 36.0 36.0 36.0 18 35.068077097145476 36.0 36.0 36.0 36.0 36.0 19 35.03813948738895 36.0 36.0 36.0 36.0 36.0 20 35.02308212089008 36.0 36.0 36.0 36.0 36.0 21 34.995527165410415 36.0 36.0 36.0 36.0 36.0 22 34.97876349067676 36.0 36.0 36.0 36.0 36.0 23 34.91688822830114 36.0 36.0 36.0 32.0 36.0 24 34.88410025805785 36.0 36.0 36.0 32.0 36.0 25 34.86178399032819 36.0 36.0 36.0 32.0 36.0 26 34.80765865767057 36.0 36.0 36.0 32.0 36.0 27 34.771030705984245 36.0 36.0 36.0 32.0 36.0 28 34.7429727457128 36.0 36.0 36.0 32.0 36.0 29 34.71165218794478 36.0 36.0 36.0 32.0 36.0 30 34.69672908212341 36.0 36.0 36.0 32.0 36.0 31 34.68191439337496 36.0 36.0 36.0 32.0 36.0 32 34.63082347809534 36.0 36.0 36.0 32.0 36.0 33 34.595114550201515 36.0 36.0 36.0 32.0 36.0 34 34.56975945277113 36.0 36.0 36.0 32.0 36.0 35 34.50524310007274 36.0 36.0 36.0 32.0 36.0 36 34.473263215221756 36.0 36.0 36.0 32.0 36.0 37 34.43393114003074 36.0 36.0 36.0 32.0 36.0 38 34.37322577351169 36.0 36.0 36.0 32.0 36.0 39 34.30675665283719 36.0 36.0 36.0 32.0 36.0 40 34.24659400201454 36.0 36.0 36.0 32.0 36.0 41 34.22561971072812 36.0 36.0 36.0 32.0 36.0 42 34.11771824924077 36.0 36.0 36.0 32.0 36.0 43 34.13721567307462 36.0 36.0 36.0 32.0 36.0 44 34.104464892408664 36.0 36.0 36.0 32.0 36.0 45 33.980510770479796 36.0 36.0 36.0 32.0 36.0 46 34.03974053020991 36.0 36.0 36.0 32.0 36.0 47 33.96393367396465 36.0 36.0 36.0 32.0 36.0 48 33.94314406990128 36.0 36.0 36.0 32.0 36.0 49 33.951562151347716 36.0 36.0 36.0 32.0 36.0 50 33.38737924418172 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 15.0 21 38.0 22 143.0 23 488.0 24 1331.0 25 3437.0 26 7083.0 27 13032.0 28 21640.0 29 31120.0 30 42924.0 31 59406.0 32 86928.0 33 129847.0 34 278242.0 35 910789.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.53354616877296 17.26034893412062 12.057228524488053 26.148876372618368 2 15.77389394644246 20.398120027281795 36.68316937782636 27.14481664844939 3 18.914237412706647 24.700575683864905 27.520941264865634 28.864245638562814 4 12.495847681288502 16.139676752625178 34.776480762551664 36.587994803534656 5 14.674881150935477 36.465073944225715 32.76332426916177 16.096720635677034 6 34.8178964486971 34.175018594859 16.95800713538318 14.049077821060726 7 30.591326886299484 29.875522072329314 20.85446520757457 18.678685833796628 8 28.99967600944489 31.866172990785806 19.53700867210517 19.59714232766413 9 27.72186734540797 14.724362198748665 18.066192405005843 39.48757805083753 10 16.40829365394531 26.50948712421193 30.745821215204106 26.336398006638657 11 37.49680106601717 20.913716398586544 21.514296555993006 20.075185979403276 12 25.387811651809745 23.434161211144772 28.109773546990606 23.068253590054876 13 30.45807473970448 19.238168356586275 24.76227035435994 25.541486549349308 14 24.6378428532348 19.293259357591023 24.46210634202057 31.606791447153608 15 26.177554388181022 26.09996054122811 22.844611860575643 24.877873210015217 16 26.452694227295133 25.04491114212344 23.860706753249044 24.641687877332387 17 24.480890230235 25.157362338682326 25.540982283893886 24.820765147188784 18 25.86547710445733 23.589916203687945 26.739558238247778 23.805048453606947 19 25.71697092783583 25.42998085051933 24.897854728686276 23.955193492958564 20 25.783155768859846 23.259055031749813 26.02551835337158 24.93227084601876 21 26.820303744297075 24.171208207424552 23.784877835390105 25.22361021288827 22 25.55787517665049 24.467401129302488 24.508624830283157 25.466098863763865 23 24.242435703002773 24.0686532204283 25.053231522137885 26.63567955443104 24 24.68568503831787 25.45853488193255 24.67856228876005 25.17721779098953 25 25.576596031682996 23.830955091379206 24.43998169516397 26.15246718177383 26 24.435758471974818 24.64849546098057 25.563926362115545 25.351819704929067 27 26.08363494710886 24.69658977879135 24.573170808577053 24.64660446552274 28 24.918025346903118 23.704069296158885 25.4034438809278 25.9744614760102 29 24.421071740585678 24.747898788880445 25.89560696541874 24.93542250511514 30 25.27302822751953 24.25901342984974 25.853500799891076 24.614457542739647 31 25.010684124336734 24.351167941827935 24.63859925141793 25.9995486824174 32 24.484987387060297 24.720353288378067 24.761387889812955 26.033271434748677 33 24.184697308357066 24.26998120350515 25.366317336772426 26.17900415136536 34 24.759812060264768 24.673330534660057 25.822614540746542 24.74424286432864 35 26.161480926789483 24.344360358179753 25.154904044587152 24.339254670443612 36 24.869426763636916 24.97172961790546 25.023542893449967 25.13530072500766 37 25.99948564923547 24.73888504386479 24.844087424502007 24.41754188239773 38 24.949541937866933 24.695392148334726 24.692618688329908 25.662447225468433 39 25.116138637701656 24.49475753025908 24.945003548768145 25.44410028327112 40 25.973389911917433 24.602670337719182 24.622336690480605 24.801603059882783 41 24.36623287230864 24.920294541452513 25.574705036225172 25.13876755001368 42 26.451748729566216 25.20299836239793 24.580419624498727 23.764833283537122 43 25.304103586209852 23.708607685257675 24.78445803439847 26.202830694134004 44 24.813579364449033 24.589811568605946 25.358312122667613 25.238296944277405 45 25.296098372105043 24.721235752925054 24.836586475852616 25.146079399117284 46 24.62501512798273 24.43490681162636 25.63190844544849 25.30816961494241 47 25.382296730338666 24.07259162514876 25.821701595497913 24.723410049014664 48 25.5467183034493 26.07197380845225 23.885163627836967 24.496144260261488 49 24.48708291705143 24.88412918028447 25.608065731043546 25.02072217162055 50 24.39166599431188 26.1899419085463 23.852794642677047 25.565597454464772 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 24.0 1 27.0 2 30.0 3 150.5 4 271.0 5 293.0 6 315.0 7 294.5 8 274.0 9 363.0 10 452.0 11 678.5 12 905.0 13 1682.5 14 2460.0 15 3408.0 16 4356.0 17 4998.5 18 5641.0 19 6224.0 20 6807.0 21 7160.5 22 7514.0 23 7857.0 24 8200.0 25 8361.5 26 8523.0 27 9952.0 28 11381.0 29 13783.0 30 16185.0 31 18654.0 32 21123.0 33 25043.5 34 28964.0 35 33673.5 36 38383.0 37 45588.5 38 52794.0 39 56952.0 40 61110.0 41 68373.5 42 75637.0 43 79622.5 44 83608.0 45 96715.5 46 109823.0 47 120179.0 48 130535.0 49 130181.5 50 129828.0 51 120759.5 52 111691.0 53 108973.5 54 106256.0 55 109187.0 56 112118.0 57 109789.5 58 107461.0 59 98819.0 60 90177.0 61 80416.5 62 70656.0 63 61507.0 64 52358.0 65 45298.0 66 38238.0 67 33355.0 68 28472.0 69 26141.0 70 23810.0 71 18643.5 72 13477.0 73 12131.0 74 10785.0 75 7834.0 76 4883.0 77 4462.5 78 4042.0 79 3483.0 80 2924.0 81 2299.0 82 1674.0 83 1404.5 84 1135.0 85 928.5 86 722.0 87 511.0 88 300.0 89 193.0 90 86.0 91 56.5 92 27.0 93 17.5 94 8.0 95 8.5 96 9.0 97 10.0 98 11.0 99 7.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01664076002889441 2 0.0037819909156578207 3 3.151659096381517E-4 4 1.8909954578289105E-4 5 0.0 6 3.781990915657821E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.2606636385526068E-4 47 1.2606636385526068E-4 48 0.0 49 6.303318192763034E-5 50 1.2606636385526068E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1586466.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.20304612819938 #Duplication Level Percentage of deduplicated Percentage of total 1 73.72579886009974 37.012596810119376 2 14.940042748904094 15.00071310561006 3 5.1562715791462415 7.765816198122068 4 2.278965174974597 4.576439752152387 5 1.193023996730444 2.9946719369953625 6 0.6854949747106887 2.064836150162974 7 0.4167223661354309 1.4644512518824604 8 0.28006181791723705 1.1247965090917142 9 0.20652269733544967 0.9331261650766566 >10 0.9348029955053501 8.31590009318754 >50 0.08140532369401955 2.9172070202624667 >100 0.08658362495919014 9.421547325260866 >500 0.011012690886924702 3.884392778468825 >1k 0.0032911490006901412 2.523504903607314 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 4434 0.27948912866711295 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 3976 0.25061993134425825 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 1680 0.10589574563841897 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1650 0.10400475018059008 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1608 0.1013573565396296 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 1.2606636385526068E-4 0.0 0.0 0.0 6 0.0 1.2606636385526068E-4 0.0 0.0 0.0 7 0.0 1.2606636385526068E-4 0.0 0.0 0.0 8 0.0 1.2606636385526068E-4 0.0 0.0 0.0 9 0.0 1.2606636385526068E-4 0.0 6.303318192763034E-5 0.0 10 0.0 1.2606636385526068E-4 0.0 6.303318192763034E-5 0.0 11 0.0 1.2606636385526068E-4 0.0 1.2606636385526068E-4 0.0 12 0.0 1.2606636385526068E-4 0.0 2.5213272771052136E-4 0.0 13 0.0 1.2606636385526068E-4 0.0 2.5213272771052136E-4 0.0 14 0.0 1.2606636385526068E-4 0.0 2.5213272771052136E-4 0.0 15 0.0 1.2606636385526068E-4 0.0 3.151659096381517E-4 0.0 16 0.0 1.2606636385526068E-4 0.0 6.303318192763034E-4 0.0 17 0.0 1.2606636385526068E-4 0.0 6.303318192763034E-4 0.0 18 0.0 1.2606636385526068E-4 0.0 8.194313650591945E-4 0.0 19 0.0 1.2606636385526068E-4 0.0 8.194313650591945E-4 0.0 20 0.0 1.8909954578289102E-4 0.0 0.0010085309108420855 0.0 21 0.0 1.8909954578289102E-4 0.0 0.0013236968204802372 0.0 22 0.0 1.8909954578289102E-4 0.0 0.0021431281855394317 0.0 23 0.0 1.8909954578289102E-4 0.0 0.004223223189151233 0.0 24 0.0 1.8909954578289102E-4 0.0 0.007059716375894598 0.0 25 0.0 1.8909954578289102E-4 0.0 0.00907677819757877 0.0 26 0.0 1.8909954578289102E-4 0.0 0.011724171838539243 0.0 27 0.0 1.8909954578289102E-4 0.0 0.015317063208414174 0.0 28 0.0 1.8909954578289102E-4 0.0 0.021620381401177207 0.0 29 0.0 2.5213272771052136E-4 0.0 0.03139052459995991 0.0 30 0.0 2.5213272771052136E-4 0.0 0.046896687354156974 0.0 31 0.0 2.5213272771052136E-4 0.0 0.07973697513845239 0.0 32 0.0 2.5213272771052136E-4 0.0 0.11780901702274112 0.0 33 0.0 2.5213272771052136E-4 0.0 0.15688958981787193 0.0 34 0.0 2.5213272771052136E-4 0.0 0.20473177490094335 0.0 35 0.0 3.151659096381517E-4 0.0 0.2569232495370213 0.0 36 0.0 3.151659096381517E-4 0.0 0.3275834464778949 0.0 37 0.0 3.151659096381517E-4 0.0 0.4286256371078863 0.0 38 0.0 3.151659096381517E-4 0.0 0.5623820491583179 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAACG 65 5.930451E-7 27.078339 2 TATACGT 55 1.5936996E-4 24.0005 5 ATACCGT 365 0.0 21.699081 6 CGTCGTA 365 0.0 20.49293 10 CCGTCGT 390 0.0 19.179281 9 TGGTATA 370 0.0 19.026823 44 TACCGTC 405 0.0 19.01214 7 ATACGTA 70 8.123716E-4 18.857534 6 ACCGTCG 410 0.0 18.780287 8 TCGCTAC 60 0.007413555 18.333136 27 GTCGTAG 410 0.0 18.243706 11 CGCAATA 440 0.0 17.499813 36 GTATAGG 215 0.0 17.39955 1 AATAGCG 370 0.0 17.243603 5 ATAGCGT 375 0.0 17.013687 6 AGCGTAT 375 0.0 17.01315 8 ATTGTCG 195 4.9112714E-11 16.922895 43 TAGCGTA 365 0.0 16.876532 7 TTGTCGA 200 7.2759576E-11 16.499823 44 ATGCGTT 120 6.409724E-6 16.499823 40 >>END_MODULE