##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062358_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 813590 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.203184650745463 32.0 32.0 32.0 32.0 32.0 2 31.40500743617793 32.0 32.0 32.0 32.0 32.0 3 31.505462210695804 32.0 32.0 32.0 32.0 32.0 4 31.612905763345175 32.0 32.0 32.0 32.0 32.0 5 31.552673951253087 32.0 32.0 32.0 32.0 32.0 6 35.15615113263437 36.0 36.0 36.0 36.0 36.0 7 35.1721149473322 36.0 36.0 36.0 36.0 36.0 8 35.100346611929844 36.0 36.0 36.0 36.0 36.0 9 35.23837805282759 36.0 36.0 36.0 36.0 36.0 10 35.12501014024263 36.0 36.0 36.0 36.0 36.0 11 35.24601089000602 36.0 36.0 36.0 36.0 36.0 12 35.15820990916801 36.0 36.0 36.0 36.0 36.0 13 35.190266596197105 36.0 36.0 36.0 36.0 36.0 14 35.15045415995772 36.0 36.0 36.0 36.0 36.0 15 35.092520802861394 36.0 36.0 36.0 36.0 36.0 16 35.123286913555965 36.0 36.0 36.0 36.0 36.0 17 35.12181688565494 36.0 36.0 36.0 36.0 36.0 18 35.12403421870967 36.0 36.0 36.0 36.0 36.0 19 35.0828537715557 36.0 36.0 36.0 36.0 36.0 20 35.04179869467422 36.0 36.0 36.0 36.0 36.0 21 34.99146007202645 36.0 36.0 36.0 36.0 36.0 22 34.954672500891114 36.0 36.0 36.0 36.0 36.0 23 34.90835555992576 36.0 36.0 36.0 32.0 36.0 24 34.89580869971361 36.0 36.0 36.0 32.0 36.0 25 34.82805712951241 36.0 36.0 36.0 32.0 36.0 26 34.79064516525523 36.0 36.0 36.0 32.0 36.0 27 34.714654801558524 36.0 36.0 36.0 32.0 36.0 28 34.64414139800145 36.0 36.0 36.0 32.0 36.0 29 34.599840214358586 36.0 36.0 36.0 32.0 36.0 30 34.52638675499945 36.0 36.0 36.0 32.0 36.0 31 34.52569844762104 36.0 36.0 36.0 32.0 36.0 32 34.46434321955776 36.0 36.0 36.0 32.0 36.0 33 34.49098686070379 36.0 36.0 36.0 32.0 36.0 34 34.42423333620128 36.0 36.0 36.0 32.0 36.0 35 34.359725414520824 36.0 36.0 36.0 32.0 36.0 36 34.2813198293981 36.0 36.0 36.0 32.0 36.0 37 34.15917108125714 36.0 36.0 36.0 32.0 36.0 38 34.082271168524684 36.0 36.0 36.0 32.0 36.0 39 33.831222114332775 36.0 36.0 36.0 32.0 36.0 40 33.889065745645844 36.0 36.0 36.0 32.0 36.0 41 33.8609864919677 36.0 36.0 36.0 32.0 36.0 42 33.746624221044996 36.0 36.0 36.0 32.0 36.0 43 33.80386558340196 36.0 36.0 36.0 32.0 36.0 44 33.689081724209984 36.0 36.0 36.0 27.0 36.0 45 33.555208397350015 36.0 36.0 36.0 21.0 36.0 46 33.50856573950024 36.0 36.0 36.0 21.0 36.0 47 33.48912965990241 36.0 36.0 36.0 21.0 36.0 48 33.44586585380843 36.0 36.0 36.0 21.0 36.0 49 33.422156122862866 36.0 36.0 36.0 21.0 36.0 50 32.94307575068523 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 2.0 20 6.0 21 22.0 22 80.0 23 263.0 24 746.0 25 1825.0 26 4038.0 27 7830.0 28 12524.0 29 17965.0 30 25071.0 31 34318.0 32 49991.0 33 73660.0 34 150836.0 35 434412.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.11265839590494 19.429774742214814 12.708059813047349 25.749507048832896 2 12.579834700991697 21.05042553923762 44.13857189916859 22.231167860602095 3 19.2267320234124 26.6516385483526 29.34662100871942 24.775008419515576 4 10.880541796236434 17.490259221475192 38.669477255128506 32.959721727159874 5 11.205767032534816 40.005653953465504 35.37690974569501 13.411669268304674 6 31.27978337797127 37.58473321099384 18.526075397347288 12.6094080136876 7 27.18116887027725 31.362518421463413 22.71245063539453 18.7438620728648 8 24.606620042035914 40.01720768446023 20.029253063582395 15.346919209921458 9 26.922036898191966 14.540493368895882 19.9650929829521 38.57237674996005 10 15.90936466770732 28.289801988716672 33.63598372644698 22.164849617129022 11 35.53706412320702 19.56722673582517 27.0490050271021 17.846704113865705 12 25.965904202362367 23.038754163645077 32.70037733993781 18.294964294054743 13 31.597241854005087 21.607320640617512 25.765557590432525 21.029879914944875 14 20.743371968682016 24.244521196179893 25.683944001278284 29.328162833859807 15 21.917058960901684 36.13539989429565 22.65403950392704 19.293501640875625 16 21.14713799333817 26.162440541304587 32.26821863592227 20.422202829434973 17 20.15351712779164 29.77064614855148 29.624012094543932 20.451824629112945 18 21.323516759055543 24.60514509765361 35.90850428348431 18.162833859806536 19 25.219336520852025 25.48396612544402 26.083039368723803 23.21365798498015 20 24.47006477464079 26.943177767671678 29.421575978072497 19.16518147961504 21 23.229390725058078 25.798620927002545 24.911687705109454 26.060300642829926 22 23.718703523887953 30.51918042257157 26.087832937966297 19.674283115574184 23 19.7911724578719 29.634951265379367 28.503791836182845 22.07008444056589 24 24.251527181995847 27.227964945488516 28.75305743679249 19.767450435723152 25 22.717953760493614 27.979449108273208 28.688036971939184 20.614560159293994 26 18.153000897257833 29.98893791713271 30.96719477869689 20.890866406912572 27 21.179340945685173 29.513514177902877 28.8049263142369 20.502218562175052 28 19.437800366277855 29.261913248687915 27.41835568283779 23.88193070219644 29 21.327572856106887 26.99578411730724 27.324327978465814 24.35231504812006 30 20.235622365073315 27.290035521577206 29.685345198441475 22.788996914908 31 23.362750279624873 25.625437874113498 28.042257156553056 22.969554689708577 32 20.60952076598778 29.467667990019542 28.2852542435379 21.637557000454773 33 19.14477808232648 29.14613011467693 30.893324647549747 20.815767155446846 34 20.765250310352883 29.4761489202178 30.81662753966986 18.941973229759462 35 21.152546122739952 29.72086677564867 29.5886134293686 19.537973672242774 36 19.114664634521073 29.17624356248233 30.665445740483538 21.043646062513062 37 21.024471785543085 28.884819134945122 26.85701643333866 23.233692646173136 38 21.14812128959304 30.969775931365923 26.52343317887388 21.35866960016716 39 23.485662311483672 26.472547597684336 27.857028724541845 22.184761366290147 40 25.61572782359665 26.734841873671012 28.472818004154426 19.176612298577908 41 22.999176489386546 25.309431040204526 31.39542029769294 20.295972172715988 42 23.212183040597843 30.339114295898423 28.886539903391146 17.56216276011259 43 19.701938322742414 29.633476320997058 29.582590739807518 21.081994616453002 44 19.13322435133175 29.9734510011185 28.964834867685198 21.928489779864552 45 19.866394621369484 30.387541636450795 28.204746862670387 21.541316879509335 46 20.661660863163096 26.332214422761368 29.300051991853383 23.706072722222153 47 24.472523015277968 26.23495864010128 28.52542435378999 20.767093990830762 48 20.488575326638724 29.490037979817846 26.479430671468428 23.541956022075 49 22.17320763529542 27.179414692904285 28.58110350422203 22.066274167578264 50 19.75429884831426 32.50236605661328 25.382932435256087 22.36040265981637 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 53.0 1 44.0 2 35.0 3 131.0 4 227.0 5 261.0 6 295.0 7 237.0 8 179.0 9 242.0 10 305.0 11 439.0 12 573.0 13 978.0 14 1383.0 15 1862.0 16 2341.0 17 2673.0 18 3005.0 19 3258.0 20 3511.0 21 4082.5 22 4654.0 23 5065.0 24 5476.0 25 6755.5 26 8035.0 27 12772.0 28 17509.0 29 22184.0 30 26859.0 31 32241.5 32 37624.0 33 48863.0 34 60102.0 35 70871.0 36 81640.0 37 80890.0 38 80140.0 39 70678.5 40 61217.0 41 54435.0 42 47653.0 43 41997.0 44 36341.0 45 38927.0 46 41513.0 47 44133.0 48 46753.0 49 44169.5 50 41586.0 51 35815.5 52 30045.0 53 27881.0 54 25717.0 55 26881.5 56 28046.0 57 28014.5 58 27983.0 59 25139.0 60 22295.0 61 19779.5 62 17264.0 63 15191.0 64 13118.0 65 11654.5 66 10191.0 67 9212.5 68 8234.0 69 8164.0 70 8094.0 71 6264.0 72 4434.0 73 4028.0 74 3622.0 75 2562.0 76 1502.0 77 1452.0 78 1402.0 79 1185.5 80 969.0 81 790.5 82 612.0 83 539.5 84 467.0 85 411.5 86 356.0 87 250.5 88 145.0 89 97.5 90 50.0 91 35.5 92 21.0 93 12.5 94 4.0 95 4.0 96 4.0 97 4.0 98 4.0 99 3.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.014995267886773437 2 0.004179009083199154 3 4.916481274351947E-4 4 0.0 5 0.0 6 8.603842230115906E-4 7 1.2291203185879867E-4 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.2291203185879867E-4 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 813590.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.812123886575414 #Duplication Level Percentage of deduplicated Percentage of total 1 79.09637947921165 38.6086227411886 2 12.335771554385754 12.042704186983409 3 3.6765985609594347 5.383877533162704 4 1.4975416113797273 2.923927466398761 5 0.7831276126844817 1.9113061024676483 6 0.4841908819413179 1.418063118844189 7 0.3084843962836569 1.0540444997931302 8 0.21864935212151276 0.8538191410779785 9 0.1734212383585096 0.7618553074187004 >10 1.1181977911097853 10.830753250387842 >50 0.15761382239193653 5.417530317026357 >100 0.1368681640004935 13.237420302563226 >500 0.011131606683781116 3.6355547297812825 >1k 0.002023928487960203 1.9205213029061992 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 2574 0.31637557000454775 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2292 0.28171437702036656 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 2105 0.25872982706277114 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2006 0.2465615359087501 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 2005 0.24643862387689128 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 1978 0.24311999901670375 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 1420 0.1745350852394941 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 1172 0.14405290133851203 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 979 0.12033087918976387 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCATATTTCACGTCCT 899 0.11049791664106 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGA 891 0.10951462038618962 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 835 0.10263154660209689 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 833 0.10238572253837927 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 828 0.10177116237908529 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 823 0.1011566022197913 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 2.458240637175973E-4 0.0 14 0.0 0.0 0.0 2.458240637175973E-4 0.0 15 0.0 0.0 0.0 2.458240637175973E-4 0.0 16 0.0 0.0 0.0 4.916481274351946E-4 0.0 17 0.0 0.0 0.0 4.916481274351946E-4 0.0 18 0.0 0.0 0.0 9.832962548703892E-4 0.0 19 0.0 0.0 0.0 0.001106208286729188 0.0 20 0.0 0.0 0.0 0.0017207684460231812 0.0 21 0.0 0.0 0.0 0.0025811526690347718 0.0 22 0.0 0.0 0.0 0.003933185019481557 0.0 23 0.0 0.0 0.0 0.007743458007104315 0.0 24 0.0 0.0 0.0 0.010816258803574282 0.0 25 0.0 0.0 0.0 0.013028675377032659 0.0 26 0.0 0.0 0.0 0.016838948364655416 0.0 27 0.0 1.2291203185879864E-4 0.0 0.021632517607148564 0.0 28 0.0 1.2291203185879864E-4 0.0 0.02851559139124129 0.0 29 0.0 1.2291203185879864E-4 0.0 0.037856905812509986 0.0 30 0.0 1.2291203185879864E-4 0.0 0.05899777529222336 0.0 31 1.2291203185879864E-4 1.2291203185879864E-4 0.0 0.09316732014896938 0.0 32 1.2291203185879864E-4 1.2291203185879864E-4 0.0 0.13901350803230128 0.0 33 2.458240637175973E-4 1.2291203185879864E-4 0.0 0.181909807151022 0.0 34 2.458240637175973E-4 1.2291203185879864E-4 0.0 0.23119753192640027 0.0 35 2.458240637175973E-4 1.2291203185879864E-4 0.0 0.288720362836318 0.0 36 2.458240637175973E-4 1.2291203185879864E-4 0.0 0.3651716466524908 0.0 37 2.458240637175973E-4 1.2291203185879864E-4 0.0 0.4837817573962315 0.0 38 2.458240637175973E-4 1.2291203185879864E-4 0.0 0.6039897245541366 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACGCAC 40 7.0303725E-4 27.499846 7 AATCGCG 40 7.0303725E-4 27.499846 19 ACGCACC 45 0.0013978665 24.444307 8 CGAGCAA 45 0.0013978665 24.444307 21 CGCACCG 45 0.0013978665 24.444307 9 TATAAGG 45 0.0013978665 24.444307 2 AGCGCAA 155 0.0 24.128899 42 GTCCTAG 120 2.3646862E-11 23.839062 1 CTAGGAC 215 0.0 23.534752 3 CGCAATC 155 0.0 22.70955 44 GATATAC 990 0.0 22.672113 1 ATACCGT 215 0.0 22.511503 6 ACTGTTC 960 0.0 22.458208 8 TGTAGGA 3325 0.0 22.231457 2 CTGTAGG 3300 0.0 22.005287 1 CAGCGCA 160 0.0 21.999876 41 ACCGGAT 50 0.0025798033 21.999876 12 CGACGTG 50 0.0025798033 21.999876 6 GTCGTAG 210 0.0 21.999876 11 GACGGTT 70 3.213827E-5 21.999876 21 >>END_MODULE