##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062354_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1478506 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.048550360972495 32.0 32.0 32.0 32.0 32.0 2 30.614017799048497 32.0 32.0 32.0 32.0 32.0 3 30.68080954693454 32.0 32.0 32.0 32.0 32.0 4 30.488005459565265 32.0 32.0 32.0 27.0 32.0 5 30.54153652403169 32.0 32.0 32.0 32.0 32.0 6 33.86351357383737 36.0 36.0 36.0 32.0 36.0 7 33.85611285987341 36.0 36.0 36.0 32.0 36.0 8 33.80843770671205 36.0 36.0 36.0 32.0 36.0 9 33.98421717598711 36.0 36.0 36.0 32.0 36.0 10 33.57930640795506 36.0 36.0 36.0 27.0 36.0 11 34.05576778180136 36.0 36.0 36.0 32.0 36.0 12 33.757549174639806 36.0 36.0 36.0 32.0 36.0 13 33.92814503289131 36.0 36.0 36.0 32.0 36.0 14 33.765657359523736 36.0 36.0 36.0 32.0 36.0 15 33.68249909029791 36.0 36.0 36.0 32.0 36.0 16 33.693326912437286 36.0 36.0 36.0 32.0 36.0 17 33.60150516805478 36.0 36.0 36.0 27.0 36.0 18 33.64554151285149 36.0 36.0 36.0 32.0 36.0 19 33.599493678077735 36.0 36.0 36.0 27.0 36.0 20 33.56081950293066 36.0 36.0 36.0 27.0 36.0 21 33.52168540404976 36.0 36.0 36.0 27.0 36.0 22 33.477377163163354 36.0 36.0 36.0 27.0 36.0 23 33.44042702565969 36.0 36.0 36.0 27.0 36.0 24 33.43829987839075 36.0 36.0 36.0 27.0 36.0 25 32.69402153254705 36.0 32.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 6.0 4 66.0 5 138.0 6 257.0 7 73.0 8 239.0 9 259.0 10 182.0 11 60.0 12 119.0 13 99.0 14 497.0 15 946.0 16 1302.0 17 1845.0 18 2114.0 19 2545.0 20 3157.0 21 3895.0 22 5022.0 23 6701.0 24 8932.0 25 12721.0 26 17228.0 27 23346.0 28 32397.0 29 45428.0 30 64085.0 31 94018.0 32 145146.0 33 213567.0 34 405859.0 35 386257.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.12663412232065 17.337270942164903 11.148253542867154 26.38784139264729 2 17.134958947064405 19.783598711359208 36.19685929316849 26.8845830484079 3 19.098818549589872 23.423791477080186 28.19815791947848 29.279232053851466 4 13.041840064506701 15.034201540151635 35.13822671508277 36.78573168025889 5 15.030251443557477 35.93202999297674 33.387349740788906 15.650368822676878 6 34.82467483693633 34.58986586114331 16.557348539752077 14.02811076216828 7 30.43272269983661 30.111500512358187 20.768983987622182 18.686792800183014 8 28.56581926105653 32.15316666847196 19.491367077912937 19.789646992558573 9 27.42981058726276 14.16638287817722 18.39166061288835 40.012145921671674 10 16.09212059812836 26.236885214262063 31.37735978107543 26.29363440653415 11 37.75825033115095 20.962125542098832 21.750048081220694 19.529576045529527 12 24.5824672479175 23.445567166574893 28.4160000433466 23.555965542161005 13 29.504659771027207 19.163909358954736 25.201905352675798 26.129525517342255 14 23.81145872908485 19.18264740918624 24.48732613175622 32.51856772997269 15 25.41846989569656 26.584612550948062 22.199981174864515 25.79693637849086 16 26.19372968580715 25.39030335861322 23.199417659804983 25.216549295774648 17 24.353905686009202 25.380830289264427 25.05170515263686 25.213558872089507 18 25.399805354577726 24.28726521827175 25.77324824199424 24.53968118515629 19 25.683935763915933 25.073569700052357 24.871197995788663 24.371296540243048 20 25.676110371822613 24.055341669798764 24.934496781555485 25.334051176823134 21 26.697188678861927 24.13002106289747 24.043466776834876 25.12932348140573 22 25.896674777406258 24.079345251965815 24.513423364349237 25.51055660627869 23 24.729411573463235 23.958149893119266 24.993497749950556 26.318940783466942 24 24.84617182023522 24.899406360376165 24.65287490221709 25.601546917171525 25 25.046579339294677 24.30523808459526 24.878277400876254 25.76990517523381 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 89.0 1 89.0 2 341.0 3 593.0 4 593.0 5 593.0 6 1455.0 7 2317.0 8 2317.0 9 2317.0 10 2618.5 11 2920.0 12 2920.0 13 2920.0 14 3284.5 15 3649.0 16 3649.0 17 3649.0 18 6072.0 19 8495.0 20 8495.0 21 8495.0 22 13891.0 23 19287.0 24 19287.0 25 19287.0 26 28546.0 27 37805.0 28 37805.0 29 37805.0 30 46640.5 31 55476.0 32 55476.0 33 55476.0 34 69940.0 35 84404.0 36 84404.0 37 84404.0 38 98962.5 39 113521.0 40 113521.0 41 113521.0 42 132270.0 43 151019.0 44 151019.0 45 151019.0 46 174476.5 47 197934.0 48 197934.0 49 197934.0 50 199604.0 51 201274.0 52 201274.0 53 201274.0 54 189100.5 55 176927.0 56 176927.0 57 176927.0 58 163033.5 59 149140.0 60 149140.0 61 149140.0 62 132323.5 63 115507.0 64 115507.0 65 115507.0 66 95363.0 67 75219.0 68 75219.0 69 75219.0 70 57249.5 71 39280.0 72 39280.0 73 39280.0 74 30419.0 75 21558.0 76 21558.0 77 21558.0 78 17438.0 79 13318.0 80 13318.0 81 13318.0 82 9244.0 83 5170.0 84 5170.0 85 5170.0 86 3671.5 87 2173.0 88 2173.0 89 2173.0 90 1463.5 91 754.0 92 754.0 93 754.0 94 428.5 95 103.0 96 103.0 97 103.0 98 338.5 99 574.0 100 574.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007642850282650189 2 0.003314156317255391 3 0.004666873181441266 4 0.014203527073951679 5 0.03787607219720448 6 0.047953812835389235 7 0.06925910344631675 8 0.09266110519673239 9 0.09922178198803386 10 0.12397650060263536 11 0.12431467981868184 12 0.1376389409309127 13 0.12336777801375172 14 0.12749356444951865 15 0.11883617651872905 16 0.11538674851505507 17 0.12607321174212346 18 0.13358079033835507 19 0.1362862240667268 20 0.12587030421249557 21 0.13364842618156436 22 0.1538039074579339 23 0.141629455680261 24 0.13669203912598257 25 0.13479823551612236 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1478506.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.19225404045572 #Duplication Level Percentage of deduplicated Percentage of total 1 78.84326004308883 41.93850717589693 2 12.6478833650761 13.455388500583638 3 3.6103090521719983 5.761214288030695 4 1.5276701898861498 3.2504088332182124 5 0.8462462674486181 2.2506873219457164 6 0.4987697447066898 1.5918412180878891 7 0.34556834598138036 1.2867091473447179 8 0.2534938172906951 1.0787126021609215 9 0.1984624813386019 0.9501000052375905 >10 1.0385860302834728 10.063464987087551 >50 0.09104429407345063 3.3987806293245946 >100 0.08713132921636704 9.775356285150108 >500 0.008903876490538792 3.1627484042045357 >1k 0.0026711629471616372 2.0360806017269675 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 2677 0.18106115227127925 No Hit GTATCAACGCAGAGTACTTTTTTTT 2560 0.17314775861579187 No Hit TCCATGTACTCTGCGTTGATACCAC 2432 0.1644903706850023 No Hit TATCAACGCAGAGTACTTTTTTTTT 1787 0.12086525181500786 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 6.76358432092937E-5 0.0 3 0.0 0.0 0.0 6.76358432092937E-5 0.0 4 0.0 0.0 0.0 6.76358432092937E-5 0.0 5 0.0 0.0 0.0 6.76358432092937E-5 0.0 6 0.0 0.0 0.0 6.76358432092937E-5 6.76358432092937E-5 7 0.0 0.0 0.0 2.705433728371748E-4 6.76358432092937E-5 8 0.0 0.0 0.0 2.705433728371748E-4 6.76358432092937E-5 9 0.0 0.0 0.0 3.381792160464685E-4 6.76358432092937E-5 10 0.0 0.0 0.0 3.381792160464685E-4 6.76358432092937E-5 11 0.0 0.0 0.0 4.0581505925576226E-4 6.76358432092937E-5 12 0.0 0.0 0.0 4.7345090246505596E-4 1.352716864185874E-4 13 0.0 6.76358432092937E-5 0.0 4.7345090246505596E-4 1.352716864185874E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTAACC 90 5.4326847E-7 12.661205 3 CGTTATT 155 1.8189894E-12 12.252364 2 CGATAAC 130 2.6084308E-9 11.693995 10 GTACCTC 90 7.4561867E-6 11.6116085 6 GCGTTAT 180 0.0 11.603354 1 ACTCTAA 200 0.0 11.401648 10 CCGATAA 125 1.826993E-8 11.401646 9 GCAGTTA 285 0.0 11.334585 15 CGTCAAT 210 0.0 11.311541 19 TAAGACT 85 5.3309133E-5 11.174678 4 AATTCCG 145 1.2187229E-9 11.136899 5 AGCCCGT 60 0.005873552 11.083808 6 ATAACGA 130 3.2590833E-8 10.96275 12 CGGACAT 140 8.358256E-9 10.856136 5 GTATAGT 70 0.0014996632 10.84989 1 GGCTAAT 70 0.0014996632 10.84989 1 GACGGTA 290 0.0 10.811906 8 GCATCGC 275 0.0 10.710274 14 TCTAATC 80 3.7854904E-4 10.682892 3 GTCCTAC 205 0.0 10.651416 1 >>END_MODULE