##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062354_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1478506 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.137279794603472 32.0 32.0 32.0 32.0 32.0 2 31.018865665746368 32.0 32.0 32.0 32.0 32.0 3 31.26165467032261 32.0 32.0 32.0 32.0 32.0 4 31.471333900572606 32.0 32.0 32.0 32.0 32.0 5 31.303399512751387 32.0 32.0 32.0 32.0 32.0 6 34.926949907541804 36.0 36.0 36.0 36.0 36.0 7 34.946688752024 36.0 36.0 36.0 36.0 36.0 8 34.86583010146729 36.0 36.0 36.0 32.0 36.0 9 35.075223908458945 36.0 36.0 36.0 36.0 36.0 10 34.8624435747978 36.0 36.0 36.0 32.0 36.0 11 35.0806307177651 36.0 36.0 36.0 36.0 36.0 12 34.952380984588494 36.0 36.0 36.0 32.0 36.0 13 35.02976788731328 36.0 36.0 36.0 36.0 36.0 14 34.97774848394258 36.0 36.0 36.0 32.0 36.0 15 34.90714816172542 36.0 36.0 36.0 32.0 36.0 16 34.94120348513973 36.0 36.0 36.0 32.0 36.0 17 34.90234466414069 36.0 36.0 36.0 32.0 36.0 18 34.917737229338265 36.0 36.0 36.0 32.0 36.0 19 34.90651914838357 36.0 36.0 36.0 32.0 36.0 20 34.905953712734345 36.0 36.0 36.0 32.0 36.0 21 34.9015986407901 36.0 36.0 36.0 32.0 36.0 22 34.87229270628594 36.0 36.0 36.0 32.0 36.0 23 34.828858996852226 36.0 36.0 36.0 32.0 36.0 24 34.80688411139353 36.0 36.0 36.0 32.0 36.0 25 34.78382569972661 36.0 36.0 36.0 32.0 36.0 26 34.72266463578775 36.0 36.0 36.0 32.0 36.0 27 34.69846723652119 36.0 36.0 36.0 32.0 36.0 28 34.68770705022502 36.0 36.0 36.0 32.0 36.0 29 34.65270685408108 36.0 36.0 36.0 32.0 36.0 30 34.64990537745535 36.0 36.0 36.0 32.0 36.0 31 34.65091044608544 36.0 36.0 36.0 32.0 36.0 32 34.6013665145762 36.0 36.0 36.0 32.0 36.0 33 34.58713052229751 36.0 36.0 36.0 32.0 36.0 34 34.568805943296816 36.0 36.0 36.0 32.0 36.0 35 34.548154691289724 36.0 36.0 36.0 32.0 36.0 36 34.504319224947345 36.0 36.0 36.0 32.0 36.0 37 34.498777143954776 36.0 36.0 36.0 32.0 36.0 38 34.45786828054807 36.0 36.0 36.0 32.0 36.0 39 34.44453252134249 36.0 36.0 36.0 32.0 36.0 40 34.43911962481045 36.0 36.0 36.0 32.0 36.0 41 34.39517188296835 36.0 36.0 36.0 32.0 36.0 42 34.34660596575191 36.0 36.0 36.0 32.0 36.0 43 34.35642127931845 36.0 36.0 36.0 32.0 36.0 44 34.31849177480511 36.0 36.0 36.0 32.0 36.0 45 34.26811727514126 36.0 36.0 36.0 32.0 36.0 46 34.28811043039393 36.0 36.0 36.0 32.0 36.0 47 34.25634525663068 36.0 36.0 36.0 32.0 36.0 48 34.219993696339415 36.0 36.0 36.0 32.0 36.0 49 34.2058226344702 36.0 36.0 36.0 32.0 36.0 50 33.58935709425596 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 6.0 21 31.0 22 112.0 23 326.0 24 900.0 25 2140.0 26 4477.0 27 8771.0 28 15193.0 29 24330.0 30 36559.0 31 56474.0 32 89223.0 33 154068.0 34 331197.0 35 754698.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.55811579664392 17.990939795025884 11.753102988298306 26.697841420031885 2 16.69581897700417 20.198560376396234 35.685133403948214 27.420487242651387 3 18.69772978603242 23.556792549180077 28.71325232753577 29.03222533725173 4 13.015165308764388 15.57673759862997 35.5299200679605 35.87817702464515 5 15.186150875377495 35.72656162813112 33.14767281815077 15.939614678340622 6 35.145660748973285 34.961691006585035 16.096067376212712 13.796580868228967 7 30.56720770832178 30.131768149740346 20.571982798852357 18.72904134308552 8 28.597313774851102 32.392428573167784 19.176925896817462 19.83333175516366 9 27.61943475373113 13.880701194313719 18.132966656882015 40.36689739507314 10 16.080083543793535 26.29296059671046 31.297066092393266 26.32988976710274 11 38.11144493157282 20.851048287933903 21.606067205679246 19.431439574814036 12 24.7074411601982 23.361555516176466 28.231268591402404 23.699734732222932 13 29.771877828023698 19.052814124528407 25.10980679145029 26.06550125599761 14 23.96507014513299 19.00005816682516 24.364865614343127 32.67000607369872 15 25.65150225971352 26.57398752524508 21.97231529665757 25.80219491838383 16 26.44946993789677 25.32887928760519 23.07011266778762 25.151538106710426 17 24.565135346085846 25.371625140513466 24.82431589726386 25.238923616136834 18 25.61065021041511 24.32144340300276 25.54456999159963 24.523336394982504 19 25.882816843489305 24.995637488113 24.702165564427876 24.419380103969818 20 25.872536195321494 23.935107466591273 24.74355870047196 25.448797637615268 21 26.924476464755635 24.076195835525862 23.89472886819533 25.104598831523173 22 25.912103163598932 24.111095930621858 24.465710656568184 25.511090249211026 23 24.9315863445938 23.756819383891578 24.92272604913338 26.38886822238124 24 25.045958555460718 24.87206680256962 24.495267520050646 25.586707121919016 25 25.410312842829182 24.03304416755833 24.726108652923966 25.830534336688523 26 25.066722759325966 24.605716852011422 25.065099499088944 25.262460889573664 27 25.870033669122748 24.48748939808158 24.35979292610243 25.282684006693245 28 25.106492635133034 23.933010755451786 25.190022901496512 25.77047370791867 29 24.972303122205794 24.519548787762783 25.139566562462377 25.368581527569045 30 25.1557315289894 24.45759435538307 25.255156218507064 25.13151789712047 31 25.308453262955982 24.367503412228288 24.329356796658246 25.99468652815748 32 25.201994445744557 24.461923049348464 24.31001294550039 26.02606955940659 33 24.824789348166323 24.157494119063433 24.87598968147576 26.141726851294482 34 25.416535340404433 24.115695167960087 25.34774968786058 25.12001980377489 35 26.211256498113638 24.04690951541624 24.74883429624229 24.992999690227837 36 25.10777771615401 24.618161847161932 24.638790779340766 25.63526965734329 37 26.030127709999146 24.3246222876336 24.502166376057993 25.14308362630926 38 25.132126619709354 24.120091497768694 24.903314562132316 25.844467320389636 39 25.558976426203206 24.21214388037654 24.41166961784396 25.81721007557629 40 25.80009820724434 24.208356273156824 24.859283628203062 25.132261891395775 41 24.776903171174144 24.542274431081104 25.285051261205567 25.39577113653918 42 25.975004497783573 24.733683867363407 24.660298977481325 24.6310126573717 43 25.19969482707544 23.70101981324391 24.97467037671812 26.12461498296253 44 24.96865078667249 24.230337922199844 25.02607361755718 25.77493767357048 45 25.124280861897073 24.532737777188597 24.83216165507614 25.510819705838188 46 24.956374822117493 24.159894055071884 25.185660640755792 25.698070482054835 47 25.13354697241675 23.999429153483316 25.4344588388549 25.432565035245037 48 25.558638246987158 24.942746258723332 24.403620952502052 25.09499454178745 49 24.66699492595904 24.68045445875769 25.05319559068411 25.599355024599156 50 24.560214541039766 25.029337066834405 24.633531844667417 25.776916547458413 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 10.0 1 12.0 2 14.0 3 45.5 4 77.0 5 109.0 6 141.0 7 152.5 8 164.0 9 216.0 10 268.0 11 367.0 12 466.0 13 852.5 14 1239.0 15 1655.0 16 2071.0 17 2540.5 18 3010.0 19 3230.5 20 3451.0 21 4231.0 22 5011.0 23 5357.0 24 5703.0 25 7020.0 26 8337.0 27 10601.5 28 12866.0 29 14551.5 30 16237.0 31 17631.0 32 19025.0 33 22008.0 34 24991.0 35 29519.5 36 34048.0 37 41781.0 38 49514.0 39 54415.0 40 59316.0 41 66272.0 42 73228.0 43 76085.0 44 78942.0 45 87772.5 46 96603.0 47 103490.5 48 110378.0 49 113057.5 50 115737.0 51 112783.0 52 109829.0 53 108621.0 54 107413.0 55 108904.5 56 110396.0 57 106627.0 58 102858.0 59 94953.0 60 87048.0 61 77419.5 62 67791.0 63 59657.0 64 51523.0 65 44233.5 66 36944.0 67 31630.5 68 26317.0 69 23572.5 70 20828.0 71 16472.5 72 12117.0 73 10722.5 74 9328.0 75 7217.0 76 5106.0 77 4456.0 78 3806.0 79 3215.5 80 2625.0 81 2104.0 82 1583.0 83 1305.5 84 1028.0 85 834.0 86 640.0 87 470.5 88 301.0 89 204.5 90 108.0 91 73.5 92 39.0 93 26.5 94 14.0 95 11.5 96 9.0 97 6.5 98 4.0 99 4.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.011701000875207812 2 0.004328693965394797 3 7.439942753022308E-4 4 0.0 5 6.76358432092937E-5 6 1.352716864185874E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.352716864185874E-4 47 0.0 48 0.0 49 0.0 50 6.76358432092937E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1478506.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.153045270145164 #Duplication Level Percentage of deduplicated Percentage of total 1 80.34826315242145 45.9214792132788 2 11.957698617676282 13.668377808456098 3 3.3613796016662785 5.76339241632526 4 1.35154872426852 3.089805016917027 5 0.7405561998791754 2.1162521008390596 6 0.46182709905062413 1.5836895059412084 7 0.3227872605209561 1.2913792439226242 8 0.21974468332141145 1.0047262266993875 9 0.17247094710771727 0.887151586304896 >10 0.90747248811607 9.410586834148555 >50 0.07634976733435289 3.050926946702214 >100 0.07160316324508598 8.535060170730844 >500 0.006520089236690621 2.4489417490324907 >1k 0.0017782061554610783 1.2282311807016457 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1507 0.10192721571640562 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 6.76358432092937E-5 0.0 5 0.0 0.0 0.0 6.76358432092937E-5 0.0 6 0.0 0.0 0.0 6.76358432092937E-5 0.0 7 0.0 0.0 0.0 2.0290752962788113E-4 0.0 8 0.0 0.0 0.0 2.0290752962788113E-4 1.352716864185874E-4 9 0.0 0.0 0.0 2.705433728371748E-4 1.352716864185874E-4 10 0.0 0.0 0.0 2.705433728371748E-4 1.352716864185874E-4 11 0.0 0.0 0.0 2.705433728371748E-4 1.352716864185874E-4 12 0.0 0.0 0.0 3.381792160464685E-4 1.352716864185874E-4 13 0.0 0.0 0.0 3.381792160464685E-4 1.352716864185874E-4 14 0.0 0.0 0.0 3.381792160464685E-4 2.0290752962788113E-4 15 0.0 0.0 0.0 3.381792160464685E-4 2.0290752962788113E-4 16 0.0 0.0 0.0 3.381792160464685E-4 2.0290752962788113E-4 17 0.0 0.0 0.0 3.381792160464685E-4 2.0290752962788113E-4 18 0.0 0.0 0.0 4.7345090246505596E-4 2.0290752962788113E-4 19 0.0 0.0 0.0 4.7345090246505596E-4 2.0290752962788113E-4 20 0.0 0.0 0.0 6.76358432092937E-4 2.705433728371748E-4 21 0.0 0.0 0.0 7.439942753022308E-4 2.705433728371748E-4 22 0.0 0.0 0.0 0.0010145376481394057 2.705433728371748E-4 23 0.0 0.0 0.0 0.0012850810209765805 3.381792160464685E-4 24 0.0 0.0 0.0 0.0019614394530695174 4.0581505925576226E-4 25 0.0 0.0 0.0 0.002502526198743867 4.0581505925576226E-4 26 0.0 0.0 0.0 0.0028407054147903356 4.0581505925576226E-4 27 0.0 0.0 0.0 0.004125786435766916 4.0581505925576226E-4 28 0.0 0.0 0.0 0.008251572871533832 4.0581505925576226E-4 29 0.0 0.0 0.0 0.01772059092083495 4.0581505925576226E-4 30 0.0 0.0 0.0 0.03402082913427473 4.0581505925576226E-4 31 0.0 0.0 0.0 0.07805176306352493 4.0581505925576226E-4 32 0.0 0.0 0.0 0.12864337378407664 4.7345090246505596E-4 33 0.0 0.0 0.0 0.17842335438611678 4.7345090246505596E-4 34 0.0 0.0 0.0 0.2352374626819235 4.7345090246505596E-4 35 0.0 0.0 0.0 0.3029409417344265 4.7345090246505596E-4 36 0.0 0.0 0.0 0.3940464225373451 4.7345090246505596E-4 37 0.0 0.0 0.0 0.5326999011163972 4.7345090246505596E-4 38 0.0 0.0 0.0 0.7124759723666999 4.7345090246505596E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATGCGC 60 2.873287E-4 21.999899 10 CTATTAG 90 1.001077E-5 19.558111 1 TATACTG 200 0.0 18.699913 5 TTAATCG 175 1.9099389E-10 17.599918 42 GATATAG 115 4.268868E-6 17.219643 1 GGTATAT 90 2.2135813E-4 17.113348 1 AATAGAC 90 2.21587E-4 17.111032 7 TACGTAG 80 0.0019886943 16.499924 26 TAGGACG 175 3.6270649E-9 16.342783 4 TCACGTA 195 8.931238E-10 15.794799 30 ACCGTCG 340 0.0 15.529341 8 ATACCGT 370 0.0 15.459389 6 TAATCGT 185 7.570634E-9 15.459389 43 ATTACTC 100 4.944794E-4 15.399929 3 GTATCAA 3060 0.0 15.387631 1 CGCAATA 430 0.0 15.348766 36 CGTAAAC 245 5.456968E-12 15.265236 32 TCTAGCG 455 0.0 14.988942 28 TTATACT 235 5.0931703E-11 14.978654 4 CTAATTG 265 1.8189894E-12 14.943328 40 >>END_MODULE