##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062352_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 961554 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.99879153952872 32.0 32.0 32.0 32.0 32.0 2 31.359580429180266 32.0 32.0 32.0 32.0 32.0 3 31.483777302158796 32.0 32.0 32.0 32.0 32.0 4 31.605832849741148 32.0 32.0 32.0 32.0 32.0 5 31.525665745241557 32.0 32.0 32.0 32.0 32.0 6 35.11732674399982 36.0 36.0 36.0 36.0 36.0 7 35.133238486866055 36.0 36.0 36.0 36.0 36.0 8 35.06925040091352 36.0 36.0 36.0 36.0 36.0 9 35.15222857998615 36.0 36.0 36.0 36.0 36.0 10 35.077460028245945 36.0 36.0 36.0 36.0 36.0 11 35.181157792490076 36.0 36.0 36.0 36.0 36.0 12 35.10866472397806 36.0 36.0 36.0 36.0 36.0 13 35.109755666348434 36.0 36.0 36.0 36.0 36.0 14 35.0761777289679 36.0 36.0 36.0 36.0 36.0 15 35.066239649567265 36.0 36.0 36.0 36.0 36.0 16 35.05763898855395 36.0 36.0 36.0 36.0 36.0 17 35.04137677135137 36.0 36.0 36.0 36.0 36.0 18 35.0363994117855 36.0 36.0 36.0 36.0 36.0 19 35.00628565842376 36.0 36.0 36.0 36.0 36.0 20 34.95428025883102 36.0 36.0 36.0 36.0 36.0 21 34.89632095545336 36.0 36.0 36.0 32.0 36.0 22 34.87891475673753 36.0 36.0 36.0 32.0 36.0 23 34.8447773083987 36.0 36.0 36.0 32.0 36.0 24 34.82014010653588 36.0 36.0 36.0 32.0 36.0 25 34.782070481741016 36.0 36.0 36.0 32.0 36.0 26 34.72204889168991 36.0 36.0 36.0 32.0 36.0 27 34.686436747182164 36.0 36.0 36.0 32.0 36.0 28 34.634852540782944 36.0 36.0 36.0 32.0 36.0 29 34.61168899510584 36.0 36.0 36.0 32.0 36.0 30 34.57629004715284 36.0 36.0 36.0 32.0 36.0 31 34.51983975938949 36.0 36.0 36.0 32.0 36.0 32 34.45957065333824 36.0 36.0 36.0 32.0 36.0 33 34.374308671171875 36.0 36.0 36.0 32.0 36.0 34 34.336033129704624 36.0 36.0 36.0 32.0 36.0 35 34.242323364054435 36.0 36.0 36.0 32.0 36.0 36 34.17470157682252 36.0 36.0 36.0 32.0 36.0 37 34.06764674682857 36.0 36.0 36.0 32.0 36.0 38 34.00708332553346 36.0 36.0 36.0 32.0 36.0 39 33.86330564898071 36.0 36.0 36.0 32.0 36.0 40 33.72984980562714 36.0 36.0 36.0 32.0 36.0 41 33.7126838430291 36.0 36.0 36.0 27.0 36.0 42 33.52804626677233 36.0 36.0 36.0 21.0 36.0 43 33.513654979335534 36.0 36.0 36.0 21.0 36.0 44 33.50177213136236 36.0 36.0 36.0 21.0 36.0 45 33.26677440892555 36.0 36.0 36.0 14.0 36.0 46 33.3269239169095 36.0 36.0 36.0 14.0 36.0 47 33.12417503333146 36.0 36.0 36.0 14.0 36.0 48 33.12429255143237 36.0 36.0 36.0 14.0 36.0 49 33.09958775066195 36.0 36.0 36.0 14.0 36.0 50 32.57662596172446 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 9.0 21 33.0 22 129.0 23 385.0 24 1157.0 25 2921.0 26 6185.0 27 12019.0 28 19184.0 29 26042.0 30 33528.0 31 43092.0 32 60865.0 33 79872.0 34 153224.0 35 522906.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.58629817818713 18.054201923226945 12.347033768287039 23.012466130298886 2 16.19945211406178 20.341357484134395 37.72092762039866 25.738262781405158 3 19.316600557851626 27.47242461619101 27.491352467796652 25.71962235816071 4 12.28047186264691 15.954639951495034 35.972818914441355 35.7920692714167 5 13.152459456255187 38.57453663548797 33.03589813988606 15.237105768370785 6 30.86026996080275 36.09423148322443 18.277421696495335 14.768076859477489 7 28.98605587633326 30.76619881192073 21.530608849027406 18.717136462718607 8 29.957547886026166 30.979331374005 19.43406194555896 19.629058794409882 9 28.63728922140618 13.706666500269355 18.820055867897175 38.835988410427284 10 17.0268128467044 26.92734885404252 30.335893771956645 25.70994452729644 11 35.89855587933699 22.884830181144274 20.96148526239816 20.255128677120577 12 23.6005466151667 24.926629185672358 29.60468158834553 21.868142610815408 13 30.07506598693365 21.320695457561406 26.237216006589332 22.36702254891561 14 24.39332580385501 19.482213167435212 26.54515503029471 29.579305998415066 15 27.983867780696663 24.96105262938951 24.83178271839127 22.223296871522553 16 25.045395266412495 26.365653931032472 25.403565478381868 23.18538532417316 17 22.699193181038194 24.92257325121626 27.57255442752045 24.805679140225095 18 24.053771291055938 24.915813360456095 28.75002339962186 22.280391948866107 19 24.998388026049497 26.544011048781453 26.897813331336568 21.559787593832482 20 25.534707359129076 23.051955480399435 29.358205571397967 22.055131589073522 21 25.728352229827966 23.709744850523215 26.759391568232253 23.802511351416562 22 24.18356119365111 25.024595602535065 26.82532650272372 23.96651670109011 23 23.294687557849063 25.07909072189393 27.199200460920554 24.42702125933645 24 23.05736339300757 27.18141674830535 26.02755539470482 23.73366446398226 25 25.22666433710431 24.40622159545902 25.169777256399538 25.197336811037136 26 22.82679911892624 24.436485106400678 27.338870203857507 25.397845570815576 27 25.094794468121396 25.68311296089455 26.82595049264004 22.396142078344013 28 24.128442084375916 24.214552692828484 27.41915690642439 24.237848316371206 29 23.389950018407703 25.279599481672378 27.729799886433838 23.600650613486085 30 24.847486464618733 24.919037308357098 27.65242513680979 22.581051090214384 31 23.39837388227806 24.687433051081893 26.62419375302895 25.289999313611094 32 22.879630265174917 25.674169105427257 27.044242965033682 24.401957664364144 33 23.568203137837294 24.892725733552147 26.976228064154483 24.56284306445608 34 22.65832184151904 25.42176518427462 28.43054056246451 23.489372411741826 35 23.789615559812553 24.857990294876835 27.204088381931747 24.148305763378865 36 24.99298011344137 25.513075708696547 26.062290833380132 23.431653344481955 37 25.111226202584568 26.006859729146775 25.47002040447026 23.411893663798395 38 24.576466844295798 25.992923954348896 25.612394103711285 23.81821509764402 39 24.271231776894485 24.26519987437003 27.275223232392566 24.18834511634292 40 24.239512289481404 25.75996771892166 25.542715229721885 24.45780476187505 41 23.023147945929193 25.954028582898097 27.305694739973003 23.717128731199704 42 24.776663609116074 27.045386946546945 25.640889643223364 22.537059801113614 43 24.508763938374756 25.039571360526814 24.976652377297583 25.47501232380085 44 23.795959457295172 24.510531909804335 28.45622814735314 23.237280485547355 45 26.04700308043022 24.478396429113705 25.782327357589903 23.692273132866173 46 24.34863184868645 24.708986400125628 26.57565417610886 24.366727575079064 47 23.925437364932183 24.963652587374188 26.603706084109678 24.507203963583947 48 23.185905315770096 27.900565126867548 24.628362005669988 24.285167551692368 49 23.24071243008713 25.48520415910079 27.696936417507494 23.577146993304588 50 23.01599599814051 27.495936261443727 25.470878880311332 24.017188860104437 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 26.0 1 31.5 2 37.0 3 145.5 4 254.0 5 316.0 6 378.0 7 405.5 8 433.0 9 588.0 10 743.0 11 1099.5 12 1456.0 13 2791.0 14 4126.0 15 5685.5 16 7245.0 17 8442.5 18 9640.0 19 10260.0 20 10880.0 21 11043.5 22 11207.0 23 10872.5 24 10538.0 25 8723.5 26 6909.0 27 6388.0 28 5867.0 29 7105.0 30 8343.0 31 9957.0 32 11571.0 33 12635.5 34 13700.0 35 15089.0 36 16478.0 37 20787.5 38 25097.0 39 28922.5 40 32748.0 41 38558.0 42 44368.0 43 52277.5 44 60187.0 45 69917.5 46 79648.0 47 88500.5 48 97353.0 49 98328.0 50 99303.0 51 93806.0 52 88309.0 53 80326.0 54 72343.0 55 66011.5 56 59680.0 57 51429.0 58 43178.0 59 40659.5 60 38141.0 61 33386.0 62 28631.0 63 26169.5 64 23708.0 65 18995.0 66 14282.0 67 11349.0 68 8416.0 69 7597.0 70 6778.0 71 6247.5 72 5717.0 73 6277.0 74 6837.0 75 5247.5 76 3658.0 77 2969.5 78 2281.0 79 1448.0 80 615.0 81 432.5 82 250.0 83 184.0 84 118.0 85 78.0 86 38.0 87 27.5 88 17.0 89 11.5 90 6.0 91 6.0 92 6.0 93 3.5 94 1.0 95 2.0 96 3.0 97 4.5 98 6.0 99 3.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015495749588686646 2 0.004159932775486349 3 8.319865550972696E-4 4 3.119949581614761E-4 5 0.0 6 7.279882357101109E-4 7 2.079966387743174E-4 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.039983193871587E-4 47 0.0 48 0.0 49 0.0 50 1.039983193871587E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 961554.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.55042354081778 #Duplication Level Percentage of deduplicated Percentage of total 1 73.56967618682381 27.625725005760497 2 13.544262705703138 10.171856022945109 3 4.961298944914529 5.5889663008245885 4 2.3482966868637827 3.5271814076493673 5 1.273392267550949 2.3908209490070242 6 0.8162614278707813 1.839057740194831 7 0.5231113055997846 1.3750135758983453 8 0.3930236975275672 1.1806565042990724 9 0.2756267748303883 0.9314911920663624 >10 1.7921970160234588 13.390727477362832 >50 0.256859259067381 6.706112543341426 >100 0.22036357670986093 16.571459628019376 >500 0.01950120147854435 5.0276141008663195 >1k 0.006128949036113938 3.6733175517648755 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 4301 0.4472967716841696 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 3820 0.39727358005894625 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2239 0.23285223710784836 No Hit GTCTACCACCCTGAAATCGATTTATTCGGAGCTAGGGTTCTATGGCTGGT 1821 0.189380939604016 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1730 0.17991709253978455 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 1618 0.1682692807684228 No Hit GTTCTAAGCTGGTTGTTAAGCGTACACCGGCCGTCCCGAGGGACTGCCCT 1612 0.16764529085209984 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 1581 0.16442134295109792 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 1456 0.15142155302770308 No Hit GGTATAGGTAACACGCTTAAGCGCCATCCATTTTCAGGGCTAGTTCATTC 1375 0.1429976891573432 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 1308 0.13602980175840357 No Hit GGGTAGTTCCGTATGAAAGTTGCGCGATTCTTCGCGCCGCCTATCGAAAG 1306 0.13582180511962927 No Hit AGCGTACACCGGCCGTCCCGAGGGACTGCCCTGGCCGTCCACACGCCGAC 1262 0.1312458790665943 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1184 0.1231340101543959 No Hit GCCCTGGCCGTCCACACGCCGACGCCGGCTCGGTCCACCGCATGTTGCCA 1153 0.11991006225339398 No Hit GTCCAAGCCAGCATCAGCGGCTTCCAACCAGGGCCCGATGTACCCAACCC 1106 0.11502214124219753 No Hit TCGCAATGCTATGTTTTAATTAGACAGTCAGATTCCCCTTGTCCGTACCA 1063 0.1105502135085497 No Hit GGCTTGGACTGCTGCGTGGCAACATGCGGTGGACCGAGCCGGCGTCGGCG 1058 0.1100302219116139 No Hit GTTCTATGGCTGGTAGAGCTCGGCACTTCTGCCGAGTCCGGTGCGTCCTC 1057 0.10992622359222676 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1026 0.10670227569122483 No Hit CCCTTATCCACATTATTCTATCAACTAGAGGCTGTTAACCTAGGAGACCT 1022 0.1062862824136762 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 1016 0.10566229249735323 No Hit GTACATGGGCAGAAATCACATTGCGTCAACACCACTTTCTGGCCATCGCA 985 0.10243834459635133 No Hit GTACATGGGAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAA 975 0.10139836140247974 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 971 0.10098236812493111 No Hit GGATAAGGGAATTCGGCAAATTGGATCCGTAACTTCGGGATAAGGATTGG 970 0.10087836980554395 No Hit GTTTTAATTAGACAGTCAGATTCCCCTTGTCCGTACCAGTTCTAAGCTGG 964 0.10025437988922098 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 1.039983193871587E-4 0.0 4 0.0 0.0 0.0 1.039983193871587E-4 0.0 5 0.0 0.0 0.0 1.039983193871587E-4 0.0 6 0.0 0.0 0.0 1.039983193871587E-4 0.0 7 0.0 0.0 0.0 1.039983193871587E-4 0.0 8 0.0 0.0 0.0 1.039983193871587E-4 0.0 9 0.0 0.0 0.0 2.079966387743174E-4 0.0 10 0.0 0.0 0.0 2.079966387743174E-4 0.0 11 0.0 0.0 0.0 3.119949581614761E-4 0.0 12 0.0 0.0 0.0 3.119949581614761E-4 0.0 13 0.0 0.0 0.0 3.119949581614761E-4 0.0 14 0.0 0.0 0.0 5.199915969357935E-4 0.0 15 0.0 0.0 0.0 5.199915969357935E-4 0.0 16 0.0 0.0 0.0 6.239899163229522E-4 0.0 17 0.0 0.0 0.0 6.239899163229522E-4 0.0 18 0.0 0.0 0.0 0.001039983193871587 0.0 19 0.0 0.0 0.0 0.0012479798326459045 0.0 20 0.0 0.0 0.0 0.002079966387743174 0.0 21 0.0 0.0 0.0 0.0030159512622276023 0.0 22 1.039983193871587E-4 0.0 0.0 0.004263931094873507 0.0 23 1.039983193871587E-4 0.0 0.0 0.010295833619328712 0.0 24 1.039983193871587E-4 0.0 0.0 0.01840770253152709 0.0 25 1.039983193871587E-4 0.0 0.0 0.022879630265174915 0.0 26 1.039983193871587E-4 0.0 0.0 0.028391541192694325 0.0 27 1.039983193871587E-4 2.079966387743174E-4 0.0 0.036295413466118386 0.0 28 2.079966387743174E-4 2.079966387743174E-4 0.0 0.05231115465174083 0.0 29 2.079966387743174E-4 2.079966387743174E-4 0.0 0.07186283869652667 0.0 30 2.079966387743174E-4 2.079966387743174E-4 0.0 0.10285433787389996 0.0 31 2.079966387743174E-4 3.119949581614761E-4 0.0 0.1621333799245804 0.0 32 2.079966387743174E-4 3.119949581614761E-4 0.0 0.22775631945787755 0.0 33 2.079966387743174E-4 3.119949581614761E-4 0.0 0.2863073732728479 0.0 34 2.079966387743174E-4 3.119949581614761E-4 0.0 0.36056217331527923 0.0 35 2.079966387743174E-4 3.119949581614761E-4 0.0 0.4512487078208816 0.0 36 3.119949581614761E-4 3.119949581614761E-4 0.0 0.5700147885610168 0.0 37 3.119949581614761E-4 3.119949581614761E-4 0.0 0.737244086135568 0.0 38 3.119949581614761E-4 3.119949581614761E-4 0.0 0.9287049921273273 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACA 45 0.0013976597 24.445484 4 TATTAGA 80 3.611307E-6 22.00208 2 GTATTAG 105 7.725794E-8 20.956541 1 GTGTAAA 105 7.725794E-8 20.956541 1 TATAAGG 95 6.8570625E-7 20.844078 2 GCTCTAG 65 4.9245555E-4 20.311726 1 GTCCTAT 55 0.004477808 20.003971 1 GAATAGT 55 0.004477808 20.003971 1 GTCATAA 190 0.0 19.688122 1 ATACATG 360 0.0 19.559439 1 TCGGAGC 585 0.0 19.55537 26 GTTATGG 80 8.972441E-5 19.253822 1 GGAGCTA 595 0.0 19.22671 28 CGATTTA 565 0.0 19.079466 18 GGATATG 300 0.0 19.070454 1 CTTAAGA 70 8.116513E-4 18.858925 2 AATATAG 70 8.122191E-4 18.856962 5 CCTACAC 130 3.5832272E-8 18.616177 3 CTAGGGT 595 0.0 18.48722 32 GTATAGA 60 0.007402543 18.336973 1 >>END_MODULE