##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062350_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 340994 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.736097995859165 32.0 32.0 32.0 32.0 32.0 2 30.64314328111345 32.0 32.0 32.0 32.0 32.0 3 31.075359097227516 32.0 32.0 32.0 32.0 32.0 4 31.36614720493616 32.0 32.0 32.0 32.0 32.0 5 31.1444160307806 32.0 32.0 32.0 32.0 32.0 6 34.71419145204901 36.0 36.0 36.0 32.0 36.0 7 34.76223335307952 36.0 36.0 36.0 32.0 36.0 8 34.65217569810613 36.0 36.0 36.0 32.0 36.0 9 34.850592679050074 36.0 36.0 36.0 32.0 36.0 10 34.66697654504185 36.0 36.0 36.0 32.0 36.0 11 34.87776911030693 36.0 36.0 36.0 32.0 36.0 12 34.75507486935254 36.0 36.0 36.0 32.0 36.0 13 34.80455081321079 36.0 36.0 36.0 32.0 36.0 14 34.74496325448542 36.0 36.0 36.0 32.0 36.0 15 34.72061091984023 36.0 36.0 36.0 32.0 36.0 16 34.69733191786366 36.0 36.0 36.0 32.0 36.0 17 34.68301201780677 36.0 36.0 36.0 32.0 36.0 18 34.70185985677168 36.0 36.0 36.0 32.0 36.0 19 34.663794670873976 36.0 36.0 36.0 32.0 36.0 20 34.63177064699086 36.0 36.0 36.0 32.0 36.0 21 34.594019249605566 36.0 36.0 36.0 32.0 36.0 22 34.5652181563312 36.0 36.0 36.0 32.0 36.0 23 34.50505874003648 36.0 36.0 36.0 32.0 36.0 24 34.474219487732924 36.0 36.0 36.0 32.0 36.0 25 34.44798735461621 36.0 36.0 36.0 32.0 36.0 26 34.3723760535376 36.0 36.0 36.0 32.0 36.0 27 34.36722640281061 36.0 36.0 36.0 32.0 36.0 28 34.34104705654645 36.0 36.0 36.0 32.0 36.0 29 34.274066405860516 36.0 36.0 36.0 32.0 36.0 30 34.263004627647405 36.0 36.0 36.0 32.0 36.0 31 34.19568966022862 36.0 36.0 36.0 32.0 36.0 32 34.13847457726529 36.0 36.0 36.0 32.0 36.0 33 34.06115943389033 36.0 36.0 36.0 32.0 36.0 34 34.014695273230615 36.0 36.0 36.0 32.0 36.0 35 33.923893089027956 36.0 36.0 36.0 32.0 36.0 36 33.85414992639166 36.0 36.0 36.0 32.0 36.0 37 33.81960972920345 36.0 36.0 36.0 32.0 36.0 38 33.71555804500959 36.0 36.0 36.0 32.0 36.0 39 33.57984891229758 36.0 36.0 36.0 27.0 36.0 40 33.488929423978135 36.0 36.0 36.0 21.0 36.0 41 33.429858003366625 36.0 36.0 36.0 21.0 36.0 42 33.32076224215089 36.0 36.0 36.0 21.0 36.0 43 33.30769163093779 36.0 36.0 36.0 21.0 36.0 44 33.25086658416277 36.0 36.0 36.0 21.0 36.0 45 33.0330181762729 36.0 36.0 36.0 14.0 36.0 46 33.10762359455005 36.0 36.0 36.0 14.0 36.0 47 32.935532590016244 36.0 36.0 36.0 14.0 36.0 48 32.88181903493903 36.0 36.0 36.0 14.0 36.0 49 32.88424429755362 36.0 36.0 36.0 14.0 36.0 50 32.150222584561604 36.0 32.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 3.0 21 15.0 22 39.0 23 139.0 24 373.0 25 882.0 26 1947.0 27 3771.0 28 6516.0 29 9712.0 30 14105.0 31 20110.0 32 29782.0 33 44725.0 34 78950.0 35 129925.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.10377837151396 18.699463584452456 12.518806805350666 23.677951238682923 2 15.973523606748724 21.806952252751604 36.54962270846347 25.669901432036202 3 19.631896443014625 26.80539955600001 28.456762788460694 25.10594121252467 4 13.216948098793527 16.18034334914984 35.77687583945758 34.825832712599045 5 15.278274691050283 36.17013789098928 31.74982551012628 16.801761907834155 6 32.35276867041649 35.829076171428234 17.129040393672614 14.68911476448266 7 27.92483152196226 31.105239388376337 21.797450981542195 19.172478108119204 8 28.835111468236978 31.535745496988216 20.319125849721694 19.31001718505311 9 27.481128700211734 13.778541557915974 18.895347132207604 39.84498260966468 10 17.074787239658175 26.12567963072664 30.168859276116294 26.630673853498887 11 37.44083473609506 22.5127128336569 19.7950697079714 20.251382722276638 12 22.853188032634005 24.457615090001582 29.901699150131673 22.787497727232736 13 31.09116289436178 21.254332920813855 25.065836935547253 22.588667249277115 14 24.463773556132953 17.948996170020585 25.611007818319383 31.976222455527076 15 27.548578567364824 24.52975712182619 24.54383361584075 23.377830694968242 16 26.18110582590896 26.541815985031995 23.846460641536215 23.430617547522832 17 22.76257060241529 25.221264890291323 27.48552760459128 24.5306369027021 18 24.552338164307876 24.8467714974457 28.183193839187787 22.417696499058636 19 24.74119779233652 26.11864138371936 26.389027372915653 22.751133451028462 20 25.044428934233448 22.60567634621137 28.87147574444125 23.478418975113932 21 26.57759374065233 24.268168941389 24.505416517592685 24.64882080036599 22 23.92417461890825 25.169944339196583 26.736247558608067 24.169633483287097 23 23.694845070587753 25.437104465181203 25.80104048751591 25.06700997671513 24 23.069614128107826 26.289318873645872 25.595465022844976 25.045601975401325 25 25.592239159633305 23.942943277594328 24.615682387373386 25.84913517539898 26 23.3860419831434 24.21919447263002 26.22392182853657 26.170841715690013 27 25.726552373355542 25.41774928591119 26.860883182695293 21.994815158037973 28 24.225352938761386 23.86083039584274 26.589617412623095 25.32419925277278 29 23.37049918766899 25.10982597934274 27.525704264591166 23.993970568397096 30 24.93386980416078 24.336205329126027 26.989917711162075 23.740007155551123 31 23.247036604749642 25.434758382845445 25.904561370581302 25.413643641823608 32 22.939113298181198 25.858519504742016 27.04944955043197 24.15291764664481 33 23.024745303436426 25.62391127116606 26.72099802342563 24.63034540197188 34 22.976650615553353 25.02947265934298 28.132459808676984 23.86141691642668 35 25.13797896737186 24.607764359490197 25.938579564449814 24.31567710868813 36 24.85439626503692 25.982861868537277 25.635934943136828 23.526806923288973 37 25.011877041824782 25.544730992334173 26.18403842882866 23.25935353701238 38 23.831797626937718 25.485492413356248 25.725672592479633 24.957037367226402 39 23.879599054528818 24.299547792629784 27.55356399232831 24.26728916051309 40 24.887827938321497 25.331530760072024 25.089004498612876 24.691636802993603 41 23.99133122576937 25.834765421092452 26.308087532331946 23.86581582080623 42 25.004838794817502 25.490477838319737 26.380229564156554 23.124453802706206 43 24.601605893358826 24.785480096423985 25.332410540947937 25.280503469269256 44 24.086934080951572 23.75613647160947 28.0084107051737 24.14851874226526 45 25.32361273218884 24.51392106605981 25.540332087954624 24.622134113796722 46 24.994574684598554 25.22449075350299 26.311020135251646 23.469914426646802 47 24.179897593506045 24.573452905329713 27.18669536707391 24.059954134090336 48 23.030610509275824 28.34038135568368 24.890760541241193 23.738247593799304 49 22.901869241101018 24.269928503140818 28.115157451450756 24.71304480430741 50 23.123574021830294 27.288749948679445 23.949981524601604 25.637694504888646 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 19.0 1 33.5 2 48.0 3 111.5 4 175.0 5 192.5 6 210.0 7 209.0 8 208.0 9 254.5 10 301.0 11 423.0 12 545.0 13 865.0 14 1185.0 15 1616.0 16 2047.0 17 2450.5 18 2854.0 19 3215.0 20 3576.0 21 3770.0 22 3964.0 23 4080.0 24 4196.0 25 3848.5 26 3501.0 27 3610.0 28 3719.0 29 4118.0 30 4517.0 31 5232.5 32 5948.0 33 6685.0 34 7422.0 35 8197.0 36 8972.0 37 10137.0 38 11302.0 39 12551.0 40 13800.0 41 15041.0 42 16282.0 43 17331.0 44 18380.0 45 20732.0 46 23084.0 47 25435.5 48 27787.0 49 26917.5 50 26048.0 51 24834.0 52 23620.0 53 21455.0 54 19290.0 55 19248.5 56 19207.0 57 17952.0 58 16697.0 59 15696.5 60 14696.0 61 13622.0 62 12548.0 63 11421.0 64 10294.0 65 9381.0 66 8468.0 67 7762.0 68 7056.0 69 6486.0 70 5916.0 71 5352.5 72 4789.0 73 4114.0 74 3439.0 75 2775.0 76 2111.0 77 1648.5 78 1186.0 79 958.5 80 731.0 81 555.0 82 379.0 83 338.0 84 297.0 85 206.0 86 115.0 87 74.5 88 34.0 89 24.0 90 14.0 91 9.5 92 5.0 93 4.5 94 4.0 95 4.0 96 4.0 97 3.5 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007918027883188562 2 0.0032258632116694136 3 8.7978087590984E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 340994.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.577044722754344 #Duplication Level Percentage of deduplicated Percentage of total 1 77.15588819877927 44.424080254449485 2 12.995785340701907 14.96517827537818 3 4.309743575876253 7.4442689583549075 4 1.9472045113901524 4.484571249466394 5 1.006029394090653 2.8962099707981492 6 0.5615843278285819 1.940061957539052 7 0.3671131124512432 1.479610166574034 8 0.2657460310785718 1.2240696893044318 9 0.18513313700710238 0.9593477018209567 >10 1.0914397109705012 11.574009887797201 >50 0.07536726903312219 3.020770893464032 >100 0.03640187824048668 3.760539471497858 >500 0.0015381075312881694 0.6674448343713524 >1k 0.0010254050208587796 1.1598366891840084 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 2293 0.6724458494870877 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 1636 0.47977383766283277 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 838 0.24575212467081534 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 732 0.21466653372200095 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 691 0.20264286175123314 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 489 0.14340428277330391 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 480 0.1407649401455744 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 479 0.14047167985360445 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 453 0.13284691226238585 No Hit TATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 394 0.115544555036159 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 381 0.1117321712405497 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 370 0.10850630802888028 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 2.932602919699467E-4 0.0 0.0 0.0 0.0 9 2.932602919699467E-4 0.0 0.0 0.0 0.0 10 2.932602919699467E-4 0.0 0.0 0.0 0.0 11 2.932602919699467E-4 0.0 0.0 0.0 0.0 12 2.932602919699467E-4 0.0 0.0 0.0 0.0 13 2.932602919699467E-4 0.0 0.0 0.0 0.0 14 2.932602919699467E-4 0.0 0.0 0.0 0.0 15 2.932602919699467E-4 0.0 0.0 2.932602919699467E-4 0.0 16 2.932602919699467E-4 0.0 0.0 5.865205839398934E-4 0.0 17 2.932602919699467E-4 0.0 0.0 5.865205839398934E-4 0.0 18 2.932602919699467E-4 0.0 0.0 8.7978087590984E-4 0.0 19 2.932602919699467E-4 0.0 0.0 0.0011730411678797868 0.0 20 2.932602919699467E-4 0.0 0.0 0.0011730411678797868 0.0 21 2.932602919699467E-4 0.0 0.0 0.00175956175181968 0.0 22 2.932602919699467E-4 0.0 0.0 0.00263934262772952 2.932602919699467E-4 23 2.932602919699467E-4 0.0 0.0 0.005865205839398934 2.932602919699467E-4 24 2.932602919699467E-4 0.0 0.0 0.009384329343038294 5.865205839398934E-4 25 2.932602919699467E-4 0.0 0.0 0.012610192554707708 5.865205839398934E-4 26 2.932602919699467E-4 0.0 0.0 0.016422576350317013 5.865205839398934E-4 27 2.932602919699467E-4 0.0 0.0 0.023460823357595736 5.865205839398934E-4 28 2.932602919699467E-4 0.0 0.0 0.03372493357654387 5.865205839398934E-4 29 2.932602919699467E-4 0.0 0.0 0.05630597605822976 5.865205839398934E-4 30 2.932602919699467E-4 0.0 0.0 0.09442981401432284 5.865205839398934E-4 31 2.932602919699467E-4 0.0 0.0 0.16745162671483957 5.865205839398934E-4 32 2.932602919699467E-4 0.0 0.0 0.25982861868537277 5.865205839398934E-4 33 2.932602919699467E-4 0.0 0.0 0.33695607547346873 5.865205839398934E-4 34 2.932602919699467E-4 0.0 0.0 0.4363713144512807 5.865205839398934E-4 35 2.932602919699467E-4 0.0 0.0 0.5522091297794096 5.865205839398934E-4 36 2.932602919699467E-4 0.0 0.0 0.6976662345965031 5.865205839398934E-4 37 2.932602919699467E-4 0.0 0.0 0.9299283858367009 5.865205839398934E-4 38 2.932602919699467E-4 0.0 0.0 1.1973817721132922 5.865205839398934E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTTAG 25 4.436235E-5 44.0 32 ACTATAC 35 3.2130565E-4 31.42857 3 TAGACTA 35 3.2130565E-4 31.42857 5 GTCTATA 35 3.2130565E-4 31.42857 1 GACGGTT 45 4.0610812E-5 29.333334 7 CTAGACG 60 2.934903E-7 29.333332 4 TGGACCT 30 0.0057393042 29.333332 5 GTAGAAC 30 0.0057393042 29.333332 3 TCGTGCG 40 7.021711E-4 27.5 32 ACTAGAC 75 6.981463E-8 26.4 3 CGACCTA 70 1.1282846E-6 25.142855 30 ACGGAGC 45 0.0013961585 24.444445 26 TCAAACG 45 0.0013961585 24.444445 22 GGGGCTA 150 0.0 23.466667 36 CGCTTAA 170 0.0 23.294117 14 GCTAGTT 180 0.0 23.222223 39 GGGCTAG 185 0.0 22.594595 37 GGCTAGT 185 0.0 22.594595 38 CGGAAGG 50 0.0025766757 22.0 15 TCCGAGA 60 2.866924E-4 22.0 2 >>END_MODULE