##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062346_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7071869 Sequences flagged as poor quality 0 Sequence length 25 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.286605280725645 32.0 32.0 32.0 32.0 32.0 2 30.93296411457848 32.0 32.0 32.0 32.0 32.0 3 30.90869895921432 32.0 32.0 32.0 32.0 32.0 4 30.9983888276211 32.0 32.0 32.0 32.0 32.0 5 30.777096266913315 32.0 32.0 32.0 32.0 32.0 6 34.45713629593535 36.0 36.0 36.0 32.0 36.0 7 34.36795534532667 36.0 36.0 36.0 32.0 36.0 8 34.372006183938076 36.0 36.0 36.0 32.0 36.0 9 34.53956287934632 36.0 36.0 36.0 32.0 36.0 10 34.200284677218995 36.0 36.0 36.0 32.0 36.0 11 34.487859857132534 36.0 36.0 36.0 32.0 36.0 12 34.273527266978505 36.0 36.0 36.0 32.0 36.0 13 34.394157895175944 36.0 36.0 36.0 32.0 36.0 14 34.29864622775111 36.0 36.0 36.0 32.0 36.0 15 34.23030517109409 36.0 36.0 36.0 32.0 36.0 16 34.23937292956077 36.0 36.0 36.0 32.0 36.0 17 34.16875567123769 36.0 36.0 36.0 32.0 36.0 18 34.17542024604811 36.0 36.0 36.0 32.0 36.0 19 34.16934561429235 36.0 36.0 36.0 32.0 36.0 20 34.168351393386956 36.0 36.0 36.0 32.0 36.0 21 34.15237046953217 36.0 36.0 36.0 32.0 36.0 22 34.10651851724063 36.0 36.0 36.0 32.0 36.0 23 34.066303264384565 36.0 36.0 36.0 32.0 36.0 24 34.02970982635566 36.0 36.0 36.0 32.0 36.0 25 33.593761847115665 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 3.0 3 19.0 4 274.0 5 668.0 6 1179.0 7 277.0 8 1110.0 9 1261.0 10 848.0 11 287.0 12 553.0 13 382.0 14 831.0 15 1036.0 16 1756.0 17 2395.0 18 3161.0 19 4463.0 20 6848.0 21 10174.0 22 15840.0 23 24380.0 24 35933.0 25 51971.0 26 74632.0 27 98173.0 28 135192.0 29 182901.0 30 238907.0 31 330236.0 32 480028.0 33 704626.0 34 1607314.0 35 3054211.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.13289466669174 17.163872946852457 11.393896745948433 26.309335640507364 2 17.279849720516815 19.499283332937384 36.75939218487861 26.46147476166719 3 19.35687321511777 22.920238787987632 28.027595101211972 29.69529289568263 4 13.167522506908313 15.380502059942335 35.021593649061515 36.430381784087835 5 15.34136496192596 35.65996697873535 32.99208247847337 16.00658558086532 6 34.73928271357224 34.2773213825679 16.964749665313587 14.018646238546284 7 31.091155739487597 29.73174439370701 20.387604369145322 18.789495497660074 8 28.298963513067115 32.53642508390656 19.284468207786517 19.880143195239807 9 27.240957267696185 14.976695626868459 18.692642289443583 39.08970481599177 10 16.619718030697143 26.123111088396183 30.700188988493203 26.55698189241346 11 37.08417270739919 20.87173429866129 22.556103033440888 19.487989960498627 12 25.434117515625992 23.084586596315066 28.114526003864675 23.366769884194266 13 29.322369388808845 19.265586931157834 25.158534860538452 26.25350881949487 14 23.697655291772872 19.87005258805345 24.456156163426616 31.976135956747058 15 25.396060033140966 27.339273036404805 21.56374114937289 25.700925781081335 16 26.243326097004555 25.35333551815252 23.46664269500042 24.9366956898425 17 24.406172064308738 25.667570186808515 24.872821694110883 25.053436054771865 18 25.22046494663277 24.477251494993187 25.880918203476522 24.42136535489752 19 26.001829095532226 24.493101387368537 24.771246244428504 24.733823272670737 20 25.911588740429647 24.39388108932784 24.38358833041823 25.310941839824284 21 26.653030641129185 24.000009061736478 24.006791205131663 25.34016909200268 22 26.054236062999532 24.308057121719294 24.336182923644536 25.30152389163664 23 24.653763108318294 24.18270194768341 24.99658733422374 26.166947609774553 24 25.20696129071631 24.66376799322488 24.73718588716923 25.392084828889583 25 25.20973636035787 24.287577431233476 24.9003441671338 25.602342041274852 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 407.0 1 407.0 2 1178.5 3 1950.0 4 1950.0 5 1950.0 6 4512.5 7 7075.0 8 7075.0 9 7075.0 10 7868.5 11 8662.0 12 8662.0 13 8662.0 14 11988.0 15 15314.0 16 15314.0 17 15314.0 18 25859.5 19 36405.0 20 36405.0 21 36405.0 22 61950.5 23 87496.0 24 87496.0 25 87496.0 26 136582.5 27 185669.0 28 185669.0 29 185669.0 30 239125.5 31 292582.0 32 292582.0 33 292582.0 34 363933.0 35 435284.0 36 435284.0 37 435284.0 38 497488.5 39 559693.0 40 559693.0 41 559693.0 42 637020.5 43 714348.0 44 714348.0 45 714348.0 46 803156.5 47 891965.0 48 891965.0 49 891965.0 50 916862.0 51 941759.0 52 941759.0 53 941759.0 54 892509.5 55 843260.0 56 843260.0 57 843260.0 58 783772.5 59 724285.0 60 724285.0 61 724285.0 62 642031.5 63 559778.0 64 559778.0 65 559778.0 66 460702.0 67 361626.0 68 361626.0 69 361626.0 70 275784.0 71 189942.0 72 189942.0 73 189942.0 74 146833.5 75 103725.0 76 103725.0 77 103725.0 78 84699.0 79 65673.0 80 65673.0 81 65673.0 82 45753.5 83 25834.0 84 25834.0 85 25834.0 86 18735.5 87 11637.0 88 11637.0 89 11637.0 90 7938.5 91 4240.0 92 4240.0 93 4240.0 94 2503.5 95 767.0 96 767.0 97 767.0 98 1630.0 99 2493.0 100 2493.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008371195789967263 2 0.003464430690104695 3 0.004581532830995597 4 0.014706154766158707 5 0.03513922557106191 6 0.04683344671684388 7 0.06739378232260808 8 0.0886752851332512 9 0.09737171319208543 10 0.11985516134419345 11 0.12118437148651932 12 0.13345835450289026 13 0.1215520253556733 14 0.12525684511407098 15 0.11459488290860591 16 0.11275661356283607 17 0.12378622963745511 18 0.13143625822254343 19 0.13238367396228634 20 0.12232975469426823 21 0.13016361021393355 22 0.15182690742715962 23 0.14057104281767663 24 0.13515521851437012 25 0.13167664729083642 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 7071869.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.30907127465483 #Duplication Level Percentage of deduplicated Percentage of total 1 78.53895423171066 34.014491666580106 2 11.584044928504703 10.033884549148281 3 3.548813155213995 4.610874056387869 4 1.6859213629455791 2.9206275388509324 5 0.9988782281282043 2.163024418835266 6 0.6586822927398128 1.7116151018172967 7 0.4465795429828339 1.3538661679792434 8 0.33290955844167713 1.153440303565157 9 0.25885028879217037 1.0089509046088585 >10 1.6645691502719322 13.934979630674915 >50 0.15853082401570748 4.736594193215295 >100 0.09854086716148198 8.32399391694895 >500 0.01319575328071695 4.003784560863945 >1k 0.011072542662201226 8.871249707078038 >5k 4.572731481391268E-4 1.1586232834461856 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.4140533428998755E-5 2 0.0 0.0 0.0 0.0 1.4140533428998755E-5 3 0.0 0.0 0.0 0.0 1.4140533428998755E-5 4 0.0 0.0 0.0 1.4140533428998755E-5 1.4140533428998755E-5 5 1.4140533428998755E-5 0.0 0.0 1.4140533428998755E-5 2.828106685799751E-5 6 1.4140533428998755E-5 0.0 0.0 2.828106685799751E-5 5.656213371599502E-5 7 1.4140533428998755E-5 0.0 0.0 4.2421600286996264E-5 5.656213371599502E-5 8 1.4140533428998755E-5 0.0 0.0 4.2421600286996264E-5 5.656213371599502E-5 9 1.4140533428998755E-5 0.0 0.0 7.070266714499378E-5 5.656213371599502E-5 10 1.4140533428998755E-5 0.0 0.0 1.272648008609888E-4 5.656213371599502E-5 11 1.4140533428998755E-5 0.0 0.0 1.272648008609888E-4 5.656213371599502E-5 12 1.4140533428998755E-5 0.0 0.0 1.272648008609888E-4 1.1312426743199004E-4 13 1.4140533428998755E-5 0.0 0.0 1.4140533428998756E-4 2.4038906829297883E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 5460 0.0 12.868447 1 GGTATCA 2070 0.0 12.568031 1 TATGCCG 160 3.6379788E-12 11.8745 5 CGTCTTA 690 0.0 11.841759 15 GCGTTAT 675 0.0 11.253128 1 CGTTATT 660 0.0 11.078552 2 CGCATCG 940 0.0 11.016507 13 GCTAGTA 115 8.8806337E-7 10.734498 2 AACCGCG 615 0.0 10.659144 7 GATATAC 860 0.0 10.488472 1 CGGTCCA 1440 0.0 10.4245 10 CGAACGA 580 0.0 10.320651 16 CGTCGTA 1180 0.0 10.144934 10 ATACCGT 1210 0.0 10.128605 6 CGACCAT 1090 0.0 10.110954 10 CCGTCGT 1095 0.0 10.064643 9 AGAACCG 850 0.0 10.058401 5 ACGGTAT 1105 0.0 9.973561 9 CGCGTAA 535 0.0 9.944774 10 ACCGTCG 1150 0.0 9.831065 8 >>END_MODULE