##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062345_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3161094 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.312881553031957 32.0 32.0 32.0 32.0 32.0 2 31.414350538136482 32.0 32.0 32.0 32.0 32.0 3 31.49251082062096 32.0 32.0 32.0 32.0 32.0 4 31.593056707582882 32.0 32.0 32.0 32.0 32.0 5 31.529730846346233 32.0 32.0 32.0 32.0 32.0 6 35.11930964406626 36.0 36.0 36.0 36.0 36.0 7 35.13168542283146 36.0 36.0 36.0 36.0 36.0 8 35.072177227251075 36.0 36.0 36.0 36.0 36.0 9 35.22050815319 36.0 36.0 36.0 36.0 36.0 10 35.084192371375224 36.0 36.0 36.0 36.0 36.0 11 35.21612011537778 36.0 36.0 36.0 36.0 36.0 12 35.13274897867637 36.0 36.0 36.0 36.0 36.0 13 35.18153145714743 36.0 36.0 36.0 36.0 36.0 14 35.139579525316236 36.0 36.0 36.0 36.0 36.0 15 35.097332126156324 36.0 36.0 36.0 36.0 36.0 16 35.11702720640386 36.0 36.0 36.0 36.0 36.0 17 35.090512335286455 36.0 36.0 36.0 36.0 36.0 18 35.10570960559857 36.0 36.0 36.0 36.0 36.0 19 35.094722270201395 36.0 36.0 36.0 36.0 36.0 20 35.08848582168072 36.0 36.0 36.0 36.0 36.0 21 35.08515406375135 36.0 36.0 36.0 36.0 36.0 22 35.06523469406478 36.0 36.0 36.0 36.0 36.0 23 35.028478115487864 36.0 36.0 36.0 36.0 36.0 24 35.00933347758719 36.0 36.0 36.0 36.0 36.0 25 34.98818731742871 36.0 36.0 36.0 36.0 36.0 26 34.944395516235836 36.0 36.0 36.0 32.0 36.0 27 34.92385104650479 36.0 36.0 36.0 32.0 36.0 28 34.91051926959464 36.0 36.0 36.0 32.0 36.0 29 34.89181372018675 36.0 36.0 36.0 32.0 36.0 30 34.87427327374637 36.0 36.0 36.0 32.0 36.0 31 34.87512867380723 36.0 36.0 36.0 32.0 36.0 32 34.84527223802898 36.0 36.0 36.0 32.0 36.0 33 34.834227960320064 36.0 36.0 36.0 32.0 36.0 34 34.825890024149864 36.0 36.0 36.0 32.0 36.0 35 34.80629585833259 36.0 36.0 36.0 32.0 36.0 36 34.77531291382034 36.0 36.0 36.0 32.0 36.0 37 34.76652608242589 36.0 36.0 36.0 32.0 36.0 38 34.73906723431825 36.0 36.0 36.0 32.0 36.0 39 34.72942879901705 36.0 36.0 36.0 32.0 36.0 40 34.73699421782459 36.0 36.0 36.0 32.0 36.0 41 34.711386627540975 36.0 36.0 36.0 32.0 36.0 42 34.705119493441195 36.0 36.0 36.0 32.0 36.0 43 34.690748519341724 36.0 36.0 36.0 32.0 36.0 44 34.658765604566014 36.0 36.0 36.0 32.0 36.0 45 34.63355977392637 36.0 36.0 36.0 32.0 36.0 46 34.62652486765658 36.0 36.0 36.0 32.0 36.0 47 34.61462677161767 36.0 36.0 36.0 32.0 36.0 48 34.58053794034597 36.0 36.0 36.0 32.0 36.0 49 34.564892091155784 36.0 36.0 36.0 32.0 36.0 50 34.0574101877388 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 16.0 21 77.0 22 241.0 23 711.0 24 1906.0 25 4353.0 26 9099.0 27 16767.0 28 28721.0 29 45323.0 30 66155.0 31 96635.0 32 144182.0 33 240153.0 34 536662.0 35 1970090.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.320684023319664 18.890594616075333 11.896308099047205 26.892413261557795 2 15.888194619540855 20.902182471953907 37.4307211391993 25.77890176930594 3 17.88640956433822 24.524117737124953 29.67442098829639 27.915051710240434 4 12.392884981373502 16.705387512147716 36.846933713961775 34.05479379251701 5 13.862194544040765 36.84414319852557 34.13033589004313 15.163326367390532 6 33.00651454772247 36.089417569127505 17.528761539967842 13.375306343182187 7 29.20998236686413 31.022139803498412 21.732792507910236 18.035085321727227 8 26.972465861502375 34.172568104586574 20.071437293544577 18.783528740366467 9 27.00580874849024 14.9249278888891 19.494991290989766 38.5742720716309 10 15.75214150544084 27.238481361199636 32.568882798170506 24.44049433518902 11 35.802130528228524 21.325781517411375 24.0005833423492 18.871504612010906 12 24.32281355758481 23.97837584076905 29.68946826636601 22.009342335280127 13 28.808760511392574 20.336978273977298 25.816536933099744 25.037724281530384 14 22.63026661023051 20.743008591329456 25.770919814469295 30.855804983970742 15 24.36608971451023 28.66551896273885 22.451973905236606 24.516417417514315 16 24.7531708958987 26.3324975467354 24.918967926926562 23.995363630439336 17 23.33489608344453 26.722900362975604 26.086348586913267 23.855854966666605 18 23.86398506339894 25.53410306684964 27.392162333673088 23.209749536078334 19 25.069959956900995 25.53603277852541 25.889391457514392 23.5046158070592 20 24.88628936690905 25.72482817657431 25.628057881227196 23.76082457528944 21 25.291339011114506 25.09909543974333 25.222913333168833 24.38665221597333 22 24.879741001058495 25.862850013318173 25.356158342649728 23.901250642973604 23 23.62685196960293 25.622743265464425 26.125195897369707 24.62520886756294 24 24.393010774118075 25.686898270029303 25.916312517122236 24.00377843873039 25 24.20073556812926 25.440812579442433 26.234778212859215 24.123673639569084 26 23.66690139552952 26.01574012035074 26.476340153124205 23.841018330995535 27 24.223322685121037 26.148478975949462 25.41778257780376 24.210415761125738 28 23.59670417899626 25.996822619004682 25.955033289108137 24.45143991289092 29 24.114752677395863 25.875187514196035 25.50088671833232 24.509173090075777 30 23.852533331814872 25.859085493819546 26.133642340278396 24.154738834087187 31 24.429896738281116 25.290326703350168 25.6820898081487 24.597686750220017 32 23.853134389549947 25.842983473443056 25.8063505862211 24.497531550785897 33 23.642479470714886 25.654599325423415 26.327309469443172 24.375611734418527 34 24.163469988554596 25.557607587752845 26.5169273675506 23.761995056141956 35 24.453591066890134 25.7141356758135 26.01621463961527 23.816058617681094 36 23.80359457833269 25.631632593020008 26.102102626495764 24.462670202151536 37 24.358592310130607 25.637769708841308 25.353849015562336 24.649788965465753 38 23.902168046885034 25.93722299937933 25.848930781558536 24.3116781721771 39 24.41689491043291 25.33926545683235 25.496362968010445 24.747476664724303 40 24.71875243191123 25.18817852300501 26.415823129587412 23.677245915496346 41 24.04490344165659 24.939530428389663 26.84383950619627 24.171726623757472 42 24.33227230825784 25.74023423536282 26.27185398472807 23.65563947165127 43 23.500155325972592 25.308674781578784 26.588484872642194 24.602685019806433 44 23.328221179123428 25.422053251184558 26.41841716823353 24.831308401458482 45 23.331954064004425 25.636725766459335 26.55558487030123 24.475735299235012 46 23.60256228154285 25.05149333030484 26.602541086315508 24.743403301836803 47 23.93634100610137 25.079268468216533 26.627277337300736 24.35711318838136 48 23.660732645090594 25.680128461855293 26.196278883196765 24.462860009857344 49 23.305926146431 25.382328201036792 26.564735678450457 24.74700997408175 50 22.814830186900544 26.121376372033346 26.43699505202789 24.62679838903822 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 35.0 1 52.5 2 70.0 3 220.5 4 371.0 5 422.5 6 474.0 7 448.0 8 422.0 9 563.0 10 704.0 11 989.0 12 1274.0 13 2138.0 14 3002.0 15 3771.0 16 4540.0 17 5514.0 18 6488.0 19 7140.5 20 7793.0 21 9760.5 22 11728.0 23 13582.5 24 15437.0 25 21253.0 26 27069.0 27 35712.5 28 44356.0 29 52664.5 30 60973.0 31 67951.5 32 74930.0 33 89406.5 34 103883.0 35 119716.0 36 135549.0 37 149245.5 38 162942.0 39 165695.5 40 168449.0 41 173684.0 42 178919.0 43 176871.5 44 174824.0 45 185175.0 46 195526.0 47 202925.0 48 210324.0 49 214380.0 50 218436.0 51 214607.5 52 210779.0 53 207164.0 54 203549.0 55 201875.0 56 200201.0 57 194376.0 58 188551.0 59 171750.0 60 154949.0 61 137155.0 62 119361.0 63 103738.5 64 88116.0 65 74379.5 66 60643.0 67 52273.5 68 43904.0 69 38099.5 70 32295.0 71 24863.0 72 17431.0 73 15278.0 74 13125.0 75 9734.5 76 6344.0 77 5561.5 78 4779.0 79 4217.5 80 3656.0 81 2884.0 82 2112.0 83 1736.5 84 1361.0 85 1111.0 86 861.0 87 617.0 88 373.0 89 236.5 90 100.0 91 69.5 92 39.0 93 28.5 94 18.0 95 17.0 96 16.0 97 11.5 98 7.0 99 6.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01581730881777005 2 0.004333942616068994 3 5.694231174397218E-4 4 1.8980770581324062E-4 5 0.0 6 4.745192645331015E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 1.581730881777005E-4 47 3.16346176355401E-5 48 0.0 49 3.16346176355401E-5 50 3.16346176355401E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3161094.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.28727697673175 #Duplication Level Percentage of deduplicated Percentage of total 1 83.75563909959754 48.818881345614265 2 9.743494693692309 11.358435478651195 3 2.4837070922559685 4.343055696461899 4 1.1065966348062368 2.5800201821788162 5 0.6421476759960725 1.871451972537384 6 0.42469289572190805 1.4852515465795868 7 0.3117168732074559 1.271838940887463 8 0.22006115744475396 1.026141250864204 9 0.17127456170023095 0.8984815035200724 >10 0.9862902061630248 10.55220356271819 >50 0.08121892831517723 3.2651752628687505 >100 0.06278189452508855 7.59515971260494 >500 0.00824800669885519 3.2749207030024916 >1k 0.0021302798754151493 1.6589828415108112 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.49038529066203E-5 2 0.0 0.0 0.0 0.0 9.49038529066203E-5 3 0.0 0.0 0.0 0.0 9.49038529066203E-5 4 0.0 0.0 0.0 0.0 9.49038529066203E-5 5 0.0 0.0 0.0 3.16346176355401E-5 9.49038529066203E-5 6 0.0 0.0 0.0 3.16346176355401E-5 9.49038529066203E-5 7 0.0 0.0 0.0 3.16346176355401E-5 9.49038529066203E-5 8 0.0 0.0 0.0 6.32692352710802E-5 9.49038529066203E-5 9 0.0 0.0 0.0 1.265384705421604E-4 9.49038529066203E-5 10 0.0 0.0 0.0 1.265384705421604E-4 9.49038529066203E-5 11 0.0 0.0 0.0 1.265384705421604E-4 9.49038529066203E-5 12 3.16346176355401E-5 0.0 0.0 1.265384705421604E-4 2.214423234487807E-4 13 3.16346176355401E-5 0.0 0.0 1.265384705421604E-4 2.214423234487807E-4 14 3.16346176355401E-5 0.0 0.0 1.581730881777005E-4 2.214423234487807E-4 15 3.16346176355401E-5 0.0 0.0 2.214423234487807E-4 2.530769410843208E-4 16 3.16346176355401E-5 0.0 0.0 2.847115587198609E-4 2.530769410843208E-4 17 3.16346176355401E-5 0.0 0.0 3.479807939909411E-4 2.530769410843208E-4 18 3.16346176355401E-5 0.0 0.0 4.745192645331015E-4 2.530769410843208E-4 19 3.16346176355401E-5 0.0 0.0 5.377884998041817E-4 2.530769410843208E-4 20 3.16346176355401E-5 0.0 0.0 7.275962056174223E-4 4.112500292620213E-4 21 3.16346176355401E-5 0.0 0.0 8.541346761595827E-4 4.112500292620213E-4 22 3.16346176355401E-5 0.0 0.0 0.001202115470150524 4.428846468975614E-4 23 3.16346176355401E-5 0.0 0.0 0.001581730881777005 4.745192645331015E-4 24 3.16346176355401E-5 0.0 0.0 0.0021195193815811866 5.377884998041817E-4 25 3.16346176355401E-5 0.0 0.0 0.002752211734291989 5.377884998041817E-4 26 3.16346176355401E-5 0.0 0.0 0.0035747117928160315 6.32692352710802E-4 27 3.16346176355401E-5 0.0 0.0 0.004587019557153314 7.592308232529624E-4 28 3.16346176355401E-5 0.0 0.0 0.00945875067302649 7.592308232529624E-4 29 3.16346176355401E-5 0.0 0.0 0.019676732169305943 7.592308232529624E-4 30 3.16346176355401E-5 0.0 0.0 0.04333942616068994 7.592308232529624E-4 31 6.32692352710802E-5 0.0 0.0 0.10344519966821614 7.908654408885025E-4 32 6.32692352710802E-5 0.0 0.0 0.17658443564158485 8.857692937951228E-4 33 6.32692352710802E-5 0.0 0.0 0.2594671338466999 8.857692937951228E-4 34 6.32692352710802E-5 0.0 0.0 0.3533270443713474 9.174039114306629E-4 35 6.32692352710802E-5 0.0 0.0 0.45765801333335865 9.174039114306629E-4 36 6.32692352710802E-5 0.0 0.0 0.6069101393378369 9.174039114306629E-4 37 6.32692352710802E-5 0.0 0.0 0.8341732324315569 9.174039114306629E-4 38 6.32692352710802E-5 0.0 0.0 1.1449517160831029 9.49038529066203E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2985 0.0 25.578033 1 GGTATCA 1410 0.0 21.222757 1 CGTACCG 90 1.0027117E-5 19.555752 5 TCAACGC 4270 0.0 17.208605 4 AACGCAG 4360 0.0 17.105677 6 TATCAAC 4440 0.0 16.946651 2 CAACGCA 4355 0.0 16.923248 5 TAACGCA 120 6.4125015E-6 16.500168 4 ATCAACG 4580 0.0 16.091866 3 GGCGTTA 525 0.0 15.923717 42 ACGACGG 590 0.0 15.661174 6 CGTTACG 85 0.0029814795 15.529323 44 TAAGCGG 85 0.0029814795 15.529323 10 CGACGGT 570 0.0 15.438507 7 TAACGGC 645 0.0 15.348749 36 TTAACGG 660 0.0 15.333244 35 TAGGACC 1830 0.0 15.267913 4 CGGCGTT 550 0.0 14.799914 41 GTATTAG 1120 0.0 14.5377 1 GACGGTA 625 0.0 14.431917 8 >>END_MODULE