##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062343_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2148925 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.217997836127367 32.0 32.0 32.0 32.0 32.0 2 30.843759554195703 32.0 32.0 32.0 32.0 32.0 3 30.843415661319032 32.0 32.0 32.0 32.0 32.0 4 30.918356387496072 32.0 32.0 32.0 32.0 32.0 5 30.703408913759205 32.0 32.0 32.0 32.0 32.0 6 34.37482182951941 36.0 36.0 36.0 32.0 36.0 7 34.26227578905732 36.0 36.0 36.0 32.0 36.0 8 34.25763719068837 36.0 36.0 36.0 32.0 36.0 9 34.43146968833254 36.0 36.0 36.0 32.0 36.0 10 34.07967332503461 36.0 36.0 36.0 32.0 36.0 11 34.40701373942785 36.0 36.0 36.0 32.0 36.0 12 34.181191060646604 36.0 36.0 36.0 32.0 36.0 13 34.309242528240866 36.0 36.0 36.0 32.0 36.0 14 34.21705364310062 36.0 36.0 36.0 32.0 36.0 15 34.14394453040474 36.0 36.0 36.0 32.0 36.0 16 34.14768826273602 36.0 36.0 36.0 32.0 36.0 17 34.077721186174486 36.0 36.0 36.0 32.0 36.0 18 34.08089672743348 36.0 36.0 36.0 32.0 36.0 19 34.075688076596435 36.0 36.0 36.0 32.0 36.0 20 34.06370301429784 36.0 36.0 36.0 32.0 36.0 21 34.05716253475575 36.0 36.0 36.0 32.0 36.0 22 34.00045604197447 36.0 36.0 36.0 32.0 36.0 23 33.972529985923195 36.0 36.0 36.0 32.0 36.0 24 33.94167735030306 36.0 36.0 36.0 32.0 36.0 25 33.48017497120653 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 13.0 4 76.0 5 220.0 6 343.0 7 86.0 8 314.0 9 407.0 10 246.0 11 97.0 12 163.0 13 104.0 14 306.0 15 351.0 16 666.0 17 849.0 18 1174.0 19 1684.0 20 2605.0 21 3823.0 22 5872.0 23 8866.0 24 12533.0 25 17708.0 26 24720.0 27 32413.0 28 43704.0 29 58623.0 30 75206.0 31 103575.0 32 148652.0 33 214895.0 34 478450.0 35 910181.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.19793941768864 17.539196719152347 11.430935634493764 25.83192822866525 2 16.609084943899706 19.881377307651142 37.59408608405504 25.915451664394112 3 18.843981638328685 24.085220567156735 28.280398953101788 28.790398841412788 4 12.41144291156997 15.413424654218952 36.195472988633604 35.979659445577475 5 14.598462334837855 36.69327508900508 33.584986816820845 15.123275759336224 6 34.129834408474 35.51046213667446 17.06359034906068 13.29611310579086 7 30.323359952092755 30.30221892326971 21.003099908125 18.37132121651254 8 28.034959921379766 33.17396589707642 19.54295002864422 19.24812415289959 9 27.332153946335097 14.38749663464808 18.841452565073563 39.43889685394326 10 15.827179923694459 27.0192804505838 31.690234353706792 25.463305272014953 11 37.30317762408481 21.243981243142635 22.381599084985897 19.071242047786658 12 24.665425647166817 23.79313960071479 29.01748998758204 22.523944764536353 13 29.37347270139376 19.81405685452779 25.359225291249583 25.453245152828867 14 23.123773173137447 20.07078263924383 25.367226873920522 31.438217313698203 15 24.92337494077543 27.993595128048522 22.248777190307344 24.8342527408687 16 25.412964990333325 25.954019240176095 24.20805478558617 24.424960983904402 17 23.629521398280012 26.303805536426978 25.51290736497423 24.553765700318785 18 24.509967919073127 25.072374291458832 26.674650010367472 23.74300777910057 19 25.374542655366707 25.165184587369367 25.437028559925896 24.023244197338034 20 25.458038954044216 24.71476813379527 25.234540544670796 24.592652367489716 21 26.521058443646123 24.41824273007264 24.590922433917164 24.46977639236407 22 25.5514740150552 24.90469328481468 25.074520996372286 24.469311703757835 23 24.121302948414513 24.69317541600786 25.759191922580992 25.426329712996633 24 24.483102151279173 25.291276341147924 25.572813959643483 24.652807547929427 25 24.488145095605272 25.069101576988384 25.587293510695602 24.855459816710745 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 250.0 1 250.0 2 601.5 3 953.0 4 953.0 5 953.0 6 2339.5 7 3726.0 8 3726.0 9 3726.0 10 4236.5 11 4747.0 12 4747.0 13 4747.0 14 5812.5 15 6878.0 16 6878.0 17 6878.0 18 11269.0 19 15660.0 20 15660.0 21 15660.0 22 25119.5 23 34579.0 24 34579.0 25 34579.0 26 50883.0 27 67187.0 28 67187.0 29 67187.0 30 84179.5 31 101172.0 32 101172.0 33 101172.0 34 122793.0 35 144414.0 36 144414.0 37 144414.0 38 163142.5 39 181871.0 40 181871.0 41 181871.0 42 204208.0 43 226545.0 44 226545.0 45 226545.0 46 251989.5 47 277434.0 48 277434.0 49 277434.0 50 279260.0 51 281086.0 52 281086.0 53 281086.0 54 260776.0 55 240466.0 56 240466.0 57 240466.0 58 219980.0 59 199494.0 60 199494.0 61 199494.0 62 176338.0 63 153182.0 64 153182.0 65 153182.0 66 126382.5 67 99583.0 68 99583.0 69 99583.0 70 75330.5 71 51078.0 72 51078.0 73 51078.0 74 39762.0 75 28446.0 76 28446.0 77 28446.0 78 23011.0 79 17576.0 80 17576.0 81 17576.0 82 12314.5 83 7053.0 84 7053.0 85 7053.0 86 5146.0 87 3239.0 88 3239.0 89 3239.0 90 2193.5 91 1148.0 92 1148.0 93 1148.0 94 696.5 95 245.0 96 245.0 97 245.0 98 579.0 99 913.0 100 913.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009865397815186663 2 0.004420815058692137 3 0.004700024430820062 4 0.014472352455297417 5 0.03411007829496143 6 0.04602301150575288 7 0.06710331910141117 8 0.08818362669706947 9 0.09525693079097688 10 0.11885012273578649 11 0.11680258734018173 12 0.13215910280721757 13 0.11959468106146096 14 0.12266598415486814 15 0.11326593529322801 16 0.11052037646730342 17 0.12243330967809486 18 0.12983235803948487 19 0.1322056377025722 20 0.12103726281745525 21 0.12820363670207197 22 0.14988889793734075 23 0.13923240690112498 24 0.13276405644682807 25 0.1307165210512233 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2148925.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.33476521244372 #Duplication Level Percentage of deduplicated Percentage of total 1 76.32028634929547 39.17883980687557 2 13.939937813132508 14.312068694264472 3 4.521512433461288 6.96332337530641 4 1.8251459046976906 3.7477374598443656 5 0.9429015788537496 2.4201815584449866 6 0.5497099290622096 1.6931538086014573 7 0.37451009281977354 1.3457771379215506 8 0.24529717956672217 1.0073818496265865 9 0.18947890588281274 0.8754169631584423 >10 0.9105394971199227 8.48280199619848 >50 0.08203270461152491 2.9569151846872135 >100 0.08164893034610868 8.988174423390095 >500 0.01199906904709658 4.176272479798093 >1k 0.004999612102956905 3.851955261882243 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3831 0.17827518410367973 No Hit TATCAACGCAGAGTACTTTTTTTTT 2580 0.1200600300150075 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3960468606396222E-4 2 0.0 0.0 0.0 0.0 1.3960468606396222E-4 3 0.0 0.0 0.0 0.0 1.3960468606396222E-4 4 0.0 0.0 0.0 0.0 1.3960468606396222E-4 5 0.0 0.0 0.0 0.0 1.8613958141861628E-4 6 0.0 0.0 0.0 0.0 2.7920937212792444E-4 7 0.0 0.0 0.0 0.0 2.7920937212792444E-4 8 0.0 0.0 0.0 0.0 2.7920937212792444E-4 9 0.0 0.0 0.0 0.0 2.7920937212792444E-4 10 4.653489535465407E-5 0.0 0.0 4.653489535465407E-5 2.7920937212792444E-4 11 4.653489535465407E-5 0.0 0.0 4.653489535465407E-5 2.7920937212792444E-4 12 4.653489535465407E-5 0.0 0.0 4.653489535465407E-5 4.653489535465407E-4 13 4.653489535465407E-5 0.0 0.0 4.653489535465407E-5 5.584187442558489E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTAGAC 55 1.1344027E-5 15.537201 3 GCGTTAT 125 1.03682396E-10 12.910133 1 CGCCAGT 350 0.0 12.761965 18 GCATCGC 350 0.0 12.758693 14 CGCGTAA 165 0.0 12.668205 10 CGCATCG 355 0.0 12.578406 13 TCGCGTA 170 0.0 12.295611 9 CATCGCC 390 0.0 12.180967 15 CGGCACA 55 0.0030722027 12.089277 4 CGAACGA 135 3.6925485E-10 11.966369 16 TAACGAA 135 3.7107384E-10 11.963858 13 CCGATAA 145 9.640644E-11 11.794536 9 CGTCGTA 315 0.0 11.763333 10 CTAGACA 170 1.8189894E-12 11.73371 4 TCGCCAG 385 0.0 11.601516 17 TTAGGAC 510 0.0 11.542889 3 CGGTTCT 445 0.0 11.528415 12 TCCAATA 380 0.0 11.49202 2 ATCGCCA 410 0.0 11.356892 16 AATAGCG 340 0.0 11.175223 5 >>END_MODULE