##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062343_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2148925 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.259032772200054 32.0 32.0 32.0 32.0 32.0 2 31.392076968716918 32.0 32.0 32.0 32.0 32.0 3 31.495392812685413 32.0 32.0 32.0 32.0 32.0 4 31.603176006607956 32.0 32.0 32.0 32.0 32.0 5 31.532582105005993 32.0 32.0 32.0 32.0 32.0 6 35.13996347010715 36.0 36.0 36.0 36.0 36.0 7 35.14605209581535 36.0 36.0 36.0 36.0 36.0 8 35.084888025408056 36.0 36.0 36.0 36.0 36.0 9 35.22984282839094 36.0 36.0 36.0 36.0 36.0 10 35.095457030841004 36.0 36.0 36.0 36.0 36.0 11 35.228409553614014 36.0 36.0 36.0 36.0 36.0 12 35.13639005549286 36.0 36.0 36.0 36.0 36.0 13 35.18891119978594 36.0 36.0 36.0 36.0 36.0 14 35.148607326919276 36.0 36.0 36.0 36.0 36.0 15 35.10460858336145 36.0 36.0 36.0 36.0 36.0 16 35.11796409832824 36.0 36.0 36.0 36.0 36.0 17 35.09409728119874 36.0 36.0 36.0 36.0 36.0 18 35.10939469734868 36.0 36.0 36.0 36.0 36.0 19 35.09538536710215 36.0 36.0 36.0 36.0 36.0 20 35.08695929360029 36.0 36.0 36.0 36.0 36.0 21 35.08367020719662 36.0 36.0 36.0 36.0 36.0 22 35.06442011703526 36.0 36.0 36.0 36.0 36.0 23 35.0296739067208 36.0 36.0 36.0 36.0 36.0 24 35.01251974824621 36.0 36.0 36.0 36.0 36.0 25 34.981617785637006 36.0 36.0 36.0 36.0 36.0 26 34.94250846353409 36.0 36.0 36.0 32.0 36.0 27 34.91984410810056 36.0 36.0 36.0 32.0 36.0 28 34.90968554044464 36.0 36.0 36.0 32.0 36.0 29 34.881491443396115 36.0 36.0 36.0 32.0 36.0 30 34.87015414684086 36.0 36.0 36.0 32.0 36.0 31 34.86866363414265 36.0 36.0 36.0 32.0 36.0 32 34.83298300312947 36.0 36.0 36.0 32.0 36.0 33 34.823462894237814 36.0 36.0 36.0 32.0 36.0 34 34.805962981490744 36.0 36.0 36.0 32.0 36.0 35 34.7845369196226 36.0 36.0 36.0 32.0 36.0 36 34.75268099165862 36.0 36.0 36.0 32.0 36.0 37 34.751539025326615 36.0 36.0 36.0 32.0 36.0 38 34.71675605244483 36.0 36.0 36.0 32.0 36.0 39 34.70596926370162 36.0 36.0 36.0 32.0 36.0 40 34.70054236420536 36.0 36.0 36.0 32.0 36.0 41 34.67346370859848 36.0 36.0 36.0 32.0 36.0 42 34.65255232267297 36.0 36.0 36.0 32.0 36.0 43 34.64506718475517 36.0 36.0 36.0 32.0 36.0 44 34.611043661365564 36.0 36.0 36.0 32.0 36.0 45 34.58021243179729 36.0 36.0 36.0 32.0 36.0 46 34.56301964935956 36.0 36.0 36.0 32.0 36.0 47 34.550397524343566 36.0 36.0 36.0 32.0 36.0 48 34.50518142792326 36.0 36.0 36.0 32.0 36.0 49 34.490092488104516 36.0 36.0 36.0 32.0 36.0 50 33.984562048466096 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 5.0 20 12.0 21 51.0 22 171.0 23 538.0 24 1348.0 25 3022.0 26 6245.0 27 11742.0 28 20006.0 29 30724.0 30 45501.0 31 66164.0 32 99266.0 33 166451.0 34 372133.0 35 1325543.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.54850120032431 18.173161325634627 12.001753711510734 26.276583762530336 2 16.012950230868533 20.330671124261347 37.290503443249904 26.36587520162022 3 18.279541871343504 24.35372066660586 28.669989892578396 28.696747569472237 4 12.18421346536865 15.889051244345998 36.39386296372131 35.53287232656404 5 14.334243556310042 36.93104083718177 33.53743547933757 15.19728012717062 6 34.31429212282646 35.760042961155335 16.753035713787124 13.172629202231075 7 30.200197959629076 30.43124393009894 21.00531289394734 18.363245216324643 8 28.003689288220524 33.35939288685872 19.367739389573575 19.26917843534718 9 27.44516444268646 14.073501867212675 18.754726200309456 39.72660748979141 10 15.769326523726978 27.13719650522936 31.712879695661783 25.380597275381877 11 37.52150493851577 21.084914550298407 22.400362972183764 18.993217539002057 12 24.599648661540073 23.765510662307896 29.03558756122247 22.599253114929557 13 29.462126412043233 19.653082355131055 25.449375850716056 25.43541538210966 14 23.212955314866733 19.905766836906825 25.377991321242018 31.503286526984418 15 24.96155054271322 27.95951464104145 22.1497260258036 24.92920879044173 16 25.499959281966568 25.922914945845015 24.1260164966204 24.451109275568015 17 23.757646264992964 26.23153437183708 25.380085391532976 24.63073397163698 18 24.560652419232873 24.945449468920508 26.679898088579172 23.814000023267447 19 25.475668066591435 25.099805716811897 25.40023500122154 24.02429121537513 20 25.547052596065473 24.58410600649162 25.237874751329155 24.630966646113755 21 26.62978000628221 24.345381993322242 24.606256616680433 24.418581383715114 22 25.563060600067477 24.86759658899217 25.118791954116592 24.45055085682376 23 24.15319287550752 24.518166059774074 25.86046511627907 25.468175948439338 24 24.675547075863513 25.14685249601545 25.557755621997046 24.619844806123993 25 24.685459008574053 24.823341903509892 25.628116383773282 24.86308270414277 26 24.257617180683365 25.541049594564726 26.040741300882996 24.16059192386891 27 25.076352129553147 25.10711169538257 25.1303791430599 24.686157032004374 28 24.184417790290492 25.10487802040555 25.75366753144014 24.957036657863814 29 24.30982933327129 25.040613329920774 25.66929976616215 24.98025757064579 30 24.097816350035483 25.233081657107626 26.077224658841047 24.591877334015848 31 24.960107960957224 24.98453878101842 25.004734925602335 25.050618332422026 32 24.43803296997336 25.17844968996126 25.121118698884327 25.262398641181054 33 24.068034017008504 24.87336691601615 25.74538432006701 25.313214746908336 34 24.82338843840525 24.97402189466826 25.939388298800566 24.263201368125923 35 25.26612143280943 24.938608839303374 25.693497911746572 24.10177181614063 36 24.101027257814955 25.392649813278734 25.51922472864339 24.98709820026292 37 25.13721977267704 25.095012622590364 25.167839733820397 24.5999278709122 38 24.28679456007073 25.08063333992578 25.686610747234084 24.94596135276941 39 25.11707016298847 24.78169317216748 25.07425805926219 25.026978605581863 40 25.330944542038463 24.875321381621042 25.634398594646164 24.159335481694335 41 24.25277755156648 25.25146294077271 26.084484102516374 24.411275405144433 42 25.43043614830671 25.444257012227045 25.47324825203299 23.652058587433253 43 24.412113033260816 24.638691438742626 25.8622799771979 25.086915550798654 44 24.10256290936166 25.25718673290133 25.53420896494759 25.106041392789418 45 24.179950440336448 25.346766406459043 25.591633025815234 24.88165012738928 46 24.177123062518728 24.90195092986071 25.653769049068277 25.267156958552278 47 24.527624057435258 24.82568020088193 25.977745141289315 24.6689506003935 48 24.990541782519166 25.40875088707144 25.083146224274927 24.517561106134465 49 24.246634945379668 25.47911164884768 25.243179729399586 25.031073676373072 50 24.109414758269722 25.825855172169888 25.157520694077597 24.9072093754828 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 38.0 1 49.5 2 61.0 3 175.5 4 290.0 5 335.0 6 380.0 7 320.0 8 260.0 9 360.5 10 461.0 11 707.5 12 954.0 13 1783.5 14 2613.0 15 3425.5 16 4238.0 17 4702.0 18 5166.0 19 5755.5 20 6345.0 21 7560.5 22 8776.0 23 9929.0 24 11082.0 25 13589.0 26 16096.0 27 20098.5 28 24101.0 29 27877.0 30 31653.0 31 35765.5 32 39878.0 33 46226.0 34 52574.0 35 60866.0 36 69158.0 37 79653.0 38 90148.0 39 95308.0 40 100468.0 41 107390.5 42 114313.0 43 116482.5 44 118652.0 45 128536.5 46 138421.0 47 146892.0 48 155363.0 49 158852.0 50 162341.0 51 155385.5 52 148430.0 53 145615.0 54 142800.0 55 144610.0 56 146420.0 57 141899.0 58 137378.0 59 125530.0 60 113682.0 61 100309.5 62 86937.0 63 75924.0 64 64911.0 65 55919.0 66 46927.0 67 40695.0 68 34463.0 69 31527.0 70 28591.0 71 21787.5 72 14984.0 73 13627.5 74 12271.0 75 8782.5 76 5294.0 77 4828.0 78 4362.0 79 3779.0 80 3196.0 81 2448.0 82 1700.0 83 1522.5 84 1345.0 85 1096.5 86 848.0 87 613.0 88 378.0 89 236.5 90 95.0 91 64.0 92 33.0 93 28.0 94 23.0 95 19.0 96 15.0 97 12.0 98 9.0 99 6.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.01577532952522773 2 0.0038623963144362883 3 4.188140581918867E-4 4 2.3267447677327035E-4 5 4.653489535465407E-5 6 3.257442674825785E-4 7 9.306979070930814E-5 8 4.653489535465407E-5 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 4.653489535465407E-5 47 4.653489535465407E-5 48 0.0 49 0.0 50 4.653489535465407E-5 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2148925.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.19728657124067 #Duplication Level Percentage of deduplicated Percentage of total 1 76.71017665575455 41.57483427142425 2 14.082921580132332 15.265122732774831 3 4.338214555065199 7.053583723451876 4 1.716759640137164 3.721748567618155 5 0.9131430824940412 2.4744938661237805 6 0.5268801260760572 1.7133283908981292 7 0.33110391894323754 1.256145378587924 8 0.24034855427424928 1.0420991578387904 9 0.16554928907248467 0.8075090035373952 >10 0.8217888372505014 7.920285364762836 >50 0.07257407364120123 2.7956416481422197 >100 0.06706180405978808 7.91139138352967 >500 0.00984922226498664 3.640149052029079 >1k 0.0036286608344687525 2.823667459281053 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.306979070930814E-5 2 0.0 0.0 0.0 0.0 9.306979070930814E-5 3 0.0 0.0 0.0 0.0 9.306979070930814E-5 4 0.0 0.0 0.0 0.0 9.306979070930814E-5 5 0.0 0.0 0.0 0.0 9.306979070930814E-5 6 0.0 0.0 0.0 0.0 2.7920937212792444E-4 7 0.0 0.0 0.0 0.0 2.7920937212792444E-4 8 0.0 0.0 0.0 0.0 3.7227916283723257E-4 9 0.0 0.0 0.0 0.0 3.7227916283723257E-4 10 0.0 0.0 0.0 4.653489535465407E-5 3.7227916283723257E-4 11 0.0 0.0 0.0 4.653489535465407E-5 3.7227916283723257E-4 12 0.0 0.0 0.0 4.653489535465407E-5 6.98023430319811E-4 13 0.0 0.0 0.0 4.653489535465407E-5 7.445583256744651E-4 14 0.0 0.0 0.0 4.653489535465407E-5 7.445583256744651E-4 15 0.0 0.0 0.0 4.653489535465407E-5 7.910932210291193E-4 16 0.0 0.0 0.0 9.306979070930814E-5 7.910932210291193E-4 17 0.0 0.0 0.0 1.3960468606396222E-4 7.910932210291193E-4 18 0.0 0.0 0.0 3.257442674825785E-4 7.910932210291193E-4 19 0.0 0.0 0.0 3.7227916283723257E-4 7.910932210291193E-4 20 0.0 0.0 0.0 4.1881405819188663E-4 8.841630117384274E-4 21 0.0 0.0 0.0 7.445583256744651E-4 8.841630117384274E-4 22 0.0 0.0 0.0 9.306979070930814E-4 9.306979070930814E-4 23 0.0 0.0 0.0 0.0018148609188315089 9.306979070930814E-4 24 0.0 0.0 0.0 0.0027455588259245904 9.772328024477354E-4 25 0.0 0.0 0.0 0.003815861419081634 9.772328024477354E-4 26 0.0 0.0 0.0 0.004886164012238677 0.0010703025931570436 27 0.0 0.0 0.0 0.005956466605395721 0.0011168374885116978 28 0.0 0.0 0.0 0.009632723338413392 0.0011168374885116978 29 0.0 0.0 0.0 0.017404050862640623 0.0011168374885116978 30 0.0 0.0 0.0 0.03406354339960678 0.0011168374885116978 31 0.0 0.0 0.0 0.0663587607757367 0.0012099072792210058 32 0.0 0.0 0.0 0.10488965412939028 0.0012099072792210058 33 0.0 0.0 0.0 0.1427690589480787 0.0012099072792210058 34 0.0 0.0 0.0 0.1881405819188664 0.00125644217457566 35 4.653489535465407E-5 0.0 0.0 0.23816559442511953 0.00125644217457566 36 4.653489535465407E-5 0.0 0.0 0.3183452191211885 0.00125644217457566 37 4.653489535465407E-5 0.0 0.0 0.4279814325767535 0.00125644217457566 38 9.306979070930814E-5 0.0 0.0 0.5765208185488093 0.0013495119652849681 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAATC 40 7.0340117E-4 27.49994 15 ATGCGCG 50 0.0025811172 21.999952 9 GTATCAA 3645 0.0 20.160486 1 TAGGACG 805 0.0 19.130394 4 TCGTACC 60 0.00741402 18.333294 15 GTCCTAC 995 0.0 18.13188 1 CGCAATA 620 0.0 18.096737 36 AGGACGT 875 0.0 17.599962 5 CTAGCGG 670 0.0 17.07459 29 TGTAGGA 1215 0.0 16.658789 2 GGACCGT 120 6.4113246E-6 16.499966 6 GGACGTG 930 0.0 16.322546 6 CGAATGC 690 0.0 16.260834 43 TAGCGGC 705 0.0 16.226917 30 GTAGGAC 1235 0.0 16.210493 3 AATACGA 685 0.0 16.058361 39 ATACGAA 700 0.0 16.028538 40 TCTAGCG 715 0.0 15.999968 28 AACGCAG 4610 0.0 15.939229 6 GTATTAG 640 0.0 15.81357 1 >>END_MODULE