##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062342_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2362288 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.199747448236625 32.0 32.0 32.0 32.0 32.0 2 31.413393286508672 32.0 32.0 32.0 32.0 32.0 3 31.512412119098094 32.0 32.0 32.0 32.0 32.0 4 31.62713521805978 32.0 32.0 32.0 32.0 32.0 5 31.551954291771366 32.0 32.0 32.0 32.0 32.0 6 35.15970448988438 36.0 36.0 36.0 36.0 36.0 7 35.17693312585087 36.0 36.0 36.0 36.0 36.0 8 35.12123204283305 36.0 36.0 36.0 36.0 36.0 9 35.2328602608996 36.0 36.0 36.0 36.0 36.0 10 35.11933007321715 36.0 36.0 36.0 36.0 36.0 11 35.24512040868853 36.0 36.0 36.0 36.0 36.0 12 35.15356129311921 36.0 36.0 36.0 36.0 36.0 13 35.19891732083472 36.0 36.0 36.0 36.0 36.0 14 35.15277265092148 36.0 36.0 36.0 36.0 36.0 15 35.12109742757869 36.0 36.0 36.0 36.0 36.0 16 35.128659587654006 36.0 36.0 36.0 36.0 36.0 17 35.103394674993055 36.0 36.0 36.0 36.0 36.0 18 35.114115213725 36.0 36.0 36.0 36.0 36.0 19 35.08988108139228 36.0 36.0 36.0 36.0 36.0 20 35.07173469111302 36.0 36.0 36.0 36.0 36.0 21 35.05143995990328 36.0 36.0 36.0 36.0 36.0 22 35.03013688424104 36.0 36.0 36.0 36.0 36.0 23 34.99011255189884 36.0 36.0 36.0 36.0 36.0 24 34.96069192240743 36.0 36.0 36.0 36.0 36.0 25 34.940267232445834 36.0 36.0 36.0 32.0 36.0 26 34.886765288567695 36.0 36.0 36.0 32.0 36.0 27 34.86374438679788 36.0 36.0 36.0 32.0 36.0 28 34.836307850693906 36.0 36.0 36.0 32.0 36.0 29 34.80089557242809 36.0 36.0 36.0 32.0 36.0 30 34.780090319215944 36.0 36.0 36.0 32.0 36.0 31 34.7795776806215 36.0 36.0 36.0 32.0 36.0 32 34.72681146413985 36.0 36.0 36.0 32.0 36.0 33 34.6938700954329 36.0 36.0 36.0 32.0 36.0 34 34.66983788598173 36.0 36.0 36.0 32.0 36.0 35 34.61512694472478 36.0 36.0 36.0 32.0 36.0 36 34.58771496108857 36.0 36.0 36.0 32.0 36.0 37 34.56075889137988 36.0 36.0 36.0 32.0 36.0 38 34.51132800065022 36.0 36.0 36.0 32.0 36.0 39 34.44736628218067 36.0 36.0 36.0 32.0 36.0 40 34.4086542369093 36.0 36.0 36.0 32.0 36.0 41 34.382928753818334 36.0 36.0 36.0 32.0 36.0 42 34.30403955825877 36.0 36.0 36.0 32.0 36.0 43 34.31007734873987 36.0 36.0 36.0 32.0 36.0 44 34.271075753676094 36.0 36.0 36.0 32.0 36.0 45 34.169320590884766 36.0 36.0 36.0 32.0 36.0 46 34.20505205123169 36.0 36.0 36.0 32.0 36.0 47 34.13341980317387 36.0 36.0 36.0 32.0 36.0 48 34.095249605467245 36.0 36.0 36.0 32.0 36.0 49 34.097210839660534 36.0 36.0 36.0 32.0 36.0 50 33.57574309313682 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 18.0 21 57.0 22 241.0 23 714.0 24 2033.0 25 4722.0 26 9788.0 27 18231.0 28 29918.0 29 42639.0 30 58372.0 31 80911.0 32 117526.0 33 179365.0 34 391929.0 35 1425820.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.560689774887486 18.306131003035652 12.402188041135851 25.73099118094101 2 15.678017763252589 20.552709785029084 37.095775935788126 26.6734965159302 3 18.58229397772746 24.50944658996961 28.50109703291014 28.40716239939279 4 12.12766452820045 16.352810943641433 35.72955845717176 35.78996607098636 5 14.306638309977446 36.978260059738695 33.15053033330398 15.564571296979876 6 34.03969983198414 35.252978376371615 17.099307151532187 13.608014640112062 7 30.229489570695506 30.687351150538078 20.57769465678584 18.505464621980572 8 28.57987679740997 32.32163055478418 19.517560940918298 19.58093170688756 9 27.309625244678042 14.832992420907187 18.906881802726847 38.95050053168792 10 16.448206145906003 26.438774611732352 31.04392859803716 26.069090644324483 11 36.81164193358303 21.30667386872388 22.28589401461634 19.595790183076748 12 24.906912281652364 24.080129095182297 28.30167193839193 22.71128668477341 13 29.369746618532545 19.50680865330561 25.71096326950821 25.412481458653644 14 23.78638845051916 20.23969981644914 24.977098474021798 30.996813259009908 15 25.689247035077855 26.96411275847822 22.987205624377722 24.3594345820662 16 25.831228029774522 25.730689907411797 24.324341485881483 24.113740576932194 17 23.65071490013072 25.74080721740956 25.869242022987883 24.739235859471833 18 24.830545640497686 24.302709915133125 27.404871886916414 23.461872557452775 19 25.199890953177594 25.604498689406203 25.71066694662124 23.48494341079496 20 25.157559112182764 24.232735381968666 26.25425011683588 24.355455389012686 21 26.475010667623934 24.35460875219279 24.532106161484123 24.63827441869916 22 25.133980276748645 24.787621153728928 25.153960905698202 24.924437663824225 23 24.06954613493359 24.479868669696497 25.63197205421185 25.818613141158064 24 24.273204621959728 25.85302892788686 25.327140467208064 24.546625982945347 25 24.909282864748075 24.40417933799774 25.621050439235184 25.065487358019006 26 23.712858042711137 25.30665185616656 26.600143589604652 24.380346511517647 27 25.08889686608915 25.25877454400141 25.462263703663567 24.190064886245878 28 24.098077795764105 24.503405173289625 26.278887248294875 25.119629782651398 29 23.95503850504257 24.95034475051306 26.433567795289992 24.66104894915438 30 24.41637090820425 24.83812304003576 26.594513454752345 24.150992597007647 31 24.525163739560966 24.732039446502714 25.46967177583766 25.27312503809866 32 23.78833571520492 25.34911069268438 25.48101670922428 25.381536882886422 33 23.76932871859824 24.957033181390244 25.934348394437933 25.33928970557358 34 24.256187221879806 25.090209153159986 26.636548972860208 24.017054652099997 35 25.461417066843673 24.9074202637443 25.797320225137664 23.833842444274364 36 24.030770168582325 25.36523912410341 25.666218513576666 24.937772193737597 37 25.284469971485272 25.160183686324444 25.32510853884031 24.230237803349972 38 24.4159475897943 25.065487358019006 25.590867836605867 24.927697215580828 39 24.466068489532184 25.033399822544922 25.381790873932392 25.118740813990502 40 25.23125884735477 25.30000575713037 25.58591501120947 23.882820384305386 41 23.840403879628564 25.184016512804536 26.583676503457664 24.391903104109236 42 25.52131662185136 25.80946946350318 25.271812751027817 23.397401163617644 43 24.183545782732672 24.58150741992509 25.711132596872183 25.523814200470053 44 23.974172497172233 25.106549243783995 25.96444633338526 24.954831925658514 45 24.164708113489972 25.30682118353054 25.896165073860594 24.63230562911889 46 24.231909260775367 24.752506682086757 25.933693041401423 25.081891015736453 47 24.736367765644058 24.81794125777266 26.033712245802477 24.411978730780806 48 24.906827617970375 26.145118630751202 24.526264367426833 24.42178938385159 49 23.713037408240403 25.42675805268369 26.140600189562065 24.71960434951384 50 23.478835110920144 26.42771723140942 24.826640308006866 25.266807349663566 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 71.0 1 71.5 2 72.0 3 247.0 4 422.0 5 457.0 6 492.0 7 459.5 8 427.0 9 590.0 10 753.0 11 1195.0 12 1637.0 13 2908.0 14 4179.0 15 5710.5 16 7242.0 17 8701.5 18 10161.0 19 11045.5 20 11930.0 21 12911.5 22 13893.0 23 13859.0 24 13825.0 25 15694.5 26 17564.0 27 23189.0 28 28814.0 29 33300.5 30 37787.0 31 39543.5 32 41300.0 33 48107.0 34 54914.0 35 63641.0 36 72368.0 37 86245.5 38 100123.0 39 104434.5 40 108746.0 41 117533.5 42 126321.0 43 125441.0 44 124561.0 45 138961.5 46 153362.0 47 163842.5 48 174323.0 49 173195.5 50 172068.0 51 161903.0 52 151738.0 53 148577.0 54 145416.0 55 149509.0 56 153602.0 57 151269.5 58 148937.0 59 137901.0 60 126865.0 61 113073.0 62 99281.0 63 87026.5 64 74772.0 65 64633.5 66 54495.0 67 47540.0 68 40585.0 69 37168.0 70 33751.0 71 26421.5 72 19092.0 73 16951.5 74 14811.0 75 10809.5 76 6808.0 77 6053.5 78 5299.0 79 4568.5 80 3838.0 81 3007.0 82 2176.0 83 1912.0 84 1648.0 85 1372.5 86 1097.0 87 791.5 88 486.0 89 312.0 90 138.0 91 95.0 92 52.0 93 35.0 94 18.0 95 14.0 96 10.0 97 10.0 98 10.0 99 9.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015154799076149902 2 0.00457183882744187 3 2.963228869638249E-4 4 1.269955229844964E-4 5 0.0 6 4.656502509431534E-4 7 8.466368198966426E-5 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 8.466368198966426E-5 47 4.233184099483213E-5 48 0.0 49 4.233184099483213E-5 50 1.269955229844964E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2362288.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.695808864185594 #Duplication Level Percentage of deduplicated Percentage of total 1 69.81833392519451 28.413135726356003 2 15.587647808970328 12.687038717521956 3 5.8612529215113 7.155852857954198 4 2.872588365237468 4.676092282287494 5 1.5651701992850418 3.184793363501167 6 0.9784064222125424 2.389022444991198 7 0.6458482056919734 1.8398320593882442 8 0.4356944137751545 1.4184749268949663 9 0.3227925330767688 1.1822672905990639 >10 1.626799487891796 11.859097111666674 >50 0.12915101827968214 3.681444884995743 >100 0.12878427969610648 11.16973594122189 >500 0.019574860783950217 5.494086088453024 >1k 0.007955558393477087 4.849126304168467 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 3644 0.15425722858516827 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 3238 0.13707050114126643 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2548 0.10786153085483227 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 2380 0.10074978156770047 No Hit CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 2375 0.1005381223627263 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2367 0.10019946763476764 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 4.233184099483213E-5 6 0.0 0.0 0.0 0.0 4.233184099483213E-5 7 0.0 0.0 0.0 0.0 4.233184099483213E-5 8 0.0 0.0 0.0 0.0 4.233184099483213E-5 9 0.0 0.0 0.0 0.0 4.233184099483213E-5 10 0.0 0.0 0.0 8.466368198966426E-5 4.233184099483213E-5 11 0.0 0.0 0.0 8.466368198966426E-5 4.233184099483213E-5 12 0.0 0.0 0.0 1.269955229844964E-4 2.539910459689928E-4 13 0.0 0.0 0.0 1.269955229844964E-4 3.809865689534892E-4 14 0.0 0.0 0.0 2.1165920497416064E-4 3.809865689534892E-4 15 0.0 0.0 0.0 2.539910459689928E-4 4.233184099483213E-4 16 0.0 0.0 0.0 4.656502509431534E-4 4.233184099483213E-4 17 0.0 0.0 0.0 5.926457739276498E-4 4.233184099483213E-4 18 0.0 0.0 0.0 9.313005018863069E-4 4.233184099483213E-4 19 0.0 0.0 0.0 0.0010582960248708031 4.233184099483213E-4 20 0.0 0.0 0.0 0.0014816144348191245 4.656502509431534E-4 21 0.0 0.0 0.0 0.001947264685762278 5.079820919379856E-4 22 0.0 0.0 0.0 0.0030478925516279134 5.079820919379856E-4 23 0.0 0.0 0.0 0.006222780626240323 5.079820919379856E-4 24 0.0 0.0 0.0 0.009820987110801054 5.079820919379856E-4 25 0.0 0.0 0.0 0.012360897570490982 5.503139329328177E-4 26 0.0 0.0 0.0 0.01553578564510339 5.926457739276498E-4 27 0.0 0.0 0.0 0.02027695183652459 5.926457739276498E-4 28 0.0 0.0 0.0 0.026161077734806255 6.34977614922482E-4 29 0.0 0.0 0.0 0.037040360870478115 6.34977614922482E-4 30 0.0 0.0 0.0 0.05748664007098203 6.34977614922482E-4 31 0.0 0.0 0.0 0.09672825667319142 7.196412969121462E-4 32 0.0 0.0 0.0 0.14464790067934138 7.619731379069784E-4 33 4.233184099483213E-5 0.0 0.0 0.19307552677742934 7.619731379069784E-4 34 4.233184099483213E-5 0.0 0.0 0.2506044986894062 8.043049789018105E-4 35 4.233184099483213E-5 0.0 0.0 0.31342495072573706 8.043049789018105E-4 36 4.233184099483213E-5 0.0 0.0 0.4079096198262024 8.043049789018105E-4 37 4.233184099483213E-5 0.0 0.0 0.5385456811362543 8.043049789018105E-4 38 4.233184099483213E-5 0.0 0.0 0.7113865879181539 8.043049789018105E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 835 0.0 21.078148 4 TTAGGAC 665 0.0 19.849909 3 GTCCTAA 545 0.0 19.783873 1 GGCGTTA 690 0.0 18.17379 42 GGACGTG 935 0.0 18.117525 6 CGATTAA 395 0.0 17.822664 41 TCGTATA 100 2.4847835E-5 17.599882 44 GTTATAT 340 0.0 17.474169 1 ACGATTA 410 0.0 17.170614 40 CGTAACG 90 2.2166123E-4 17.110996 15 AGGACGT 980 0.0 17.06111 5 GTATTAG 1025 0.0 16.959574 1 ATACCGT 580 0.0 16.689543 6 GCTATCG 120 6.4121505E-6 16.499887 13 CGTCTTA 735 0.0 16.462473 15 GACGTGA 605 0.0 16.363525 7 TACCGTC 610 0.0 16.229399 7 TTAACGG 705 0.0 16.226841 35 TAACGGC 710 0.0 16.112568 36 ACCGTCG 575 0.0 16.069458 8 >>END_MODULE