##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062341_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1565656 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28469791576183 32.0 32.0 32.0 32.0 32.0 2 31.430358265161697 32.0 32.0 32.0 32.0 32.0 3 31.50984571323458 32.0 32.0 32.0 32.0 32.0 4 31.610091233323285 32.0 32.0 32.0 32.0 32.0 5 31.558859672878334 32.0 32.0 32.0 32.0 32.0 6 35.14175910928071 36.0 36.0 36.0 36.0 36.0 7 35.16417463350825 36.0 36.0 36.0 36.0 36.0 8 35.10794708416153 36.0 36.0 36.0 36.0 36.0 9 35.21865020157685 36.0 36.0 36.0 36.0 36.0 10 35.11441785424129 36.0 36.0 36.0 36.0 36.0 11 35.233040974518026 36.0 36.0 36.0 36.0 36.0 12 35.14940446688161 36.0 36.0 36.0 36.0 36.0 13 35.18304404032559 36.0 36.0 36.0 36.0 36.0 14 35.14321728400108 36.0 36.0 36.0 36.0 36.0 15 35.113286060284 36.0 36.0 36.0 36.0 36.0 16 35.120460049972664 36.0 36.0 36.0 36.0 36.0 17 35.09871261630907 36.0 36.0 36.0 36.0 36.0 18 35.10558513492108 36.0 36.0 36.0 36.0 36.0 19 35.082896881562746 36.0 36.0 36.0 36.0 36.0 20 35.07694921489778 36.0 36.0 36.0 36.0 36.0 21 35.04981554057852 36.0 36.0 36.0 36.0 36.0 22 35.03309092163285 36.0 36.0 36.0 36.0 36.0 23 34.9732463580761 36.0 36.0 36.0 36.0 36.0 24 34.95781129443505 36.0 36.0 36.0 36.0 36.0 25 34.93132335583295 36.0 36.0 36.0 32.0 36.0 26 34.88566390062696 36.0 36.0 36.0 32.0 36.0 27 34.862381647054015 36.0 36.0 36.0 32.0 36.0 28 34.83353686889074 36.0 36.0 36.0 32.0 36.0 29 34.81464191367708 36.0 36.0 36.0 32.0 36.0 30 34.791162298742506 36.0 36.0 36.0 32.0 36.0 31 34.768822780994036 36.0 36.0 36.0 32.0 36.0 32 34.727728185501796 36.0 36.0 36.0 32.0 36.0 33 34.70004969163086 36.0 36.0 36.0 32.0 36.0 34 34.67863119356998 36.0 36.0 36.0 32.0 36.0 35 34.615084667385425 36.0 36.0 36.0 32.0 36.0 36 34.58792352854012 36.0 36.0 36.0 32.0 36.0 37 34.548620514340314 36.0 36.0 36.0 32.0 36.0 38 34.48845659582948 36.0 36.0 36.0 32.0 36.0 39 34.41255869744056 36.0 36.0 36.0 32.0 36.0 40 34.33184301021425 36.0 36.0 36.0 32.0 36.0 41 34.34021713582038 36.0 36.0 36.0 32.0 36.0 42 34.2357561303377 36.0 36.0 36.0 32.0 36.0 43 34.23375888445482 36.0 36.0 36.0 32.0 36.0 44 34.23756495679766 36.0 36.0 36.0 32.0 36.0 45 34.090007638970505 36.0 36.0 36.0 32.0 36.0 46 34.16907162237426 36.0 36.0 36.0 32.0 36.0 47 34.105233844471584 36.0 36.0 36.0 32.0 36.0 48 34.09171363313525 36.0 36.0 36.0 32.0 36.0 49 34.123511167204036 36.0 36.0 36.0 32.0 36.0 50 33.54892134670707 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 5.0 20 7.0 21 32.0 22 167.0 23 433.0 24 1235.0 25 2808.0 26 5876.0 27 10736.0 28 18615.0 29 27674.0 30 40077.0 31 57493.0 32 84654.0 33 125322.0 34 257236.0 35 933286.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.518006715147926 17.369568217010688 11.865536061979691 26.2468890058617 2 15.538772358227298 20.6947298361573 36.672826230672584 27.093671574942817 3 18.50621500248779 24.846980194130605 28.430482733336444 28.216322070045162 4 12.379123841057911 16.239751873340946 35.30976232266174 36.0713619629394 5 13.980018599232528 37.01726305139827 33.875129658111355 15.12758869125785 6 34.583272123399226 34.57618241624884 17.120556957174337 13.719988503177593 7 29.69355976025385 30.501655536082 21.51149422350759 18.29329048015656 8 28.339494754914234 32.83888670308165 20.025663364110635 18.795955177893482 9 27.201569182502418 14.568462037637897 18.289458220707484 39.9405105591522 10 15.41072879355363 27.44421507661964 32.5237472343861 24.621308895440635 11 37.134594061530755 21.03163146949266 21.781093675749975 20.05268079322661 12 23.733885349016642 23.905506701344358 29.442929992284384 22.917677957354616 13 30.367462584373577 19.73786067948515 24.921247068321524 24.97342966781975 14 23.894009922997135 19.198725645991203 25.125634238938822 31.781630192072846 15 25.657551850470345 26.70880448834227 23.425260721384518 24.20838293980287 16 26.099730719902713 25.275539454388447 24.52550240921377 24.09922741649507 17 24.29620555217749 25.489507273628437 26.34767790625782 23.86660926793625 18 25.51837696147813 23.989497054269904 27.227181449820392 23.26494453443157 19 24.89046125074729 26.600734771878372 25.11803359103149 23.390770386342847 20 24.96065546965617 23.866545396945433 27.011552984819144 24.161246148579256 21 25.70417767376742 25.21805556265233 24.12228484418033 24.95548191939992 22 24.636190836301207 25.344903350416693 24.906556740433402 25.1123490728487 23 23.731458251365563 24.79835928198787 25.07421809133041 26.39596437531616 24 23.90014153811565 26.162771387839985 25.00255483963272 24.93453223441165 25 25.28888849146939 24.26031005533783 24.82703735686511 25.623764096327672 26 23.867120235862796 24.93038062000848 25.727298972443503 25.475200171685223 27 25.571453754847806 25.448310484550884 24.99897806414691 23.981257696454396 28 24.67847343222266 23.99971641280077 25.592722794790173 25.729087360186405 29 23.993457055700613 25.556571813987233 26.28284885057765 24.167122279734503 30 25.418227247875652 24.623927606064168 25.938264855115044 24.019580290945136 31 24.1542842105801 24.90847287015794 25.31724721139254 25.61999570786942 32 24.10733903232894 25.476094365556673 25.24801105734593 25.168555544768456 33 23.74461567547405 24.87525995493263 25.604730541063937 25.77539382852938 34 23.994351249572066 25.553825361382067 26.34141854915767 24.1104048398882 35 25.6181434491357 24.841025103854232 25.599046022881144 23.941785424128927 36 24.54728241708268 25.55491116822597 25.436430480258753 24.461375934432596 37 25.730748005947667 25.27783881005789 25.2136484642859 23.777764719708543 38 24.598762435681913 25.328871731721396 24.772172175752527 25.30019365684416 39 24.49145917110783 25.083926481934725 25.549865359951358 24.874748987006086 40 25.421229184444094 25.076772930963127 24.89199415452692 24.610003730065863 41 23.671866616932455 25.32344269750188 26.110652659332573 24.894038026233094 42 26.228430766400795 25.3520569013883 25.096700680098312 23.322811652112595 43 25.07159938070687 24.03503707072307 25.078752931678476 25.814610616891574 44 24.692333437230147 24.67029794539797 26.139266863218996 24.49810175415289 45 25.010219358530865 24.953757402647835 25.487144046968176 24.548879191853125 46 24.198879571500928 24.67874385798623 26.331091667300054 24.791284903212784 47 25.15087934442773 24.208526144010015 26.489169069814235 24.151425441748025 48 24.633188899732765 26.72847675351418 24.58847920616023 24.049855140592825 49 23.886537017071436 24.86146382091596 26.72892385044991 24.523075311562692 50 23.833013126766033 26.709123843296357 24.36595267415064 25.09191035578697 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 34.0 1 36.5 2 39.0 3 184.0 4 329.0 5 368.5 6 408.0 7 367.0 8 326.0 9 437.0 10 548.0 11 772.5 12 997.0 13 1709.5 14 2422.0 15 3112.5 16 3803.0 17 4260.5 18 4718.0 19 5106.0 20 5494.0 21 6198.0 22 6902.0 23 7438.5 24 7975.0 25 8825.0 26 9675.0 27 11825.5 28 13976.0 29 16539.5 30 19103.0 31 21592.5 32 24082.0 33 28480.0 34 32878.0 35 37413.5 36 41949.0 37 49063.0 38 56177.0 39 60721.0 40 65265.0 41 71772.0 42 78279.0 43 83025.0 44 87771.0 45 103794.5 46 119818.0 47 131223.0 48 142628.0 49 138481.0 50 134334.0 51 123718.0 52 113102.0 53 109026.5 54 104951.0 55 104856.5 56 104762.0 57 101333.5 58 97905.0 59 89291.0 60 80677.0 61 71013.0 62 61349.0 63 53310.5 64 45272.0 65 38388.0 66 31504.0 67 26769.5 68 22035.0 69 19945.5 70 17856.0 71 13717.0 72 9578.0 73 8376.5 74 7175.0 75 5066.5 76 2958.0 77 2708.0 78 2458.0 79 2102.0 80 1746.0 81 1353.0 82 960.0 83 823.5 84 687.0 85 574.5 86 462.0 87 333.5 88 205.0 89 127.5 90 50.0 91 32.0 92 14.0 93 10.0 94 6.0 95 5.0 96 4.0 97 5.5 98 7.0 99 5.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.015329037796297525 2 0.004407098366435539 3 5.748389173611572E-4 4 2.554839632716254E-4 5 0.0 6 3.8322594490743816E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 3.193549540895318E-4 47 6.387099081790636E-5 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1565656.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.44274678670358 #Duplication Level Percentage of deduplicated Percentage of total 1 78.62728604268341 44.37939996632892 2 13.156199309886746 14.851440526466837 3 3.902061462639092 6.6072920124567736 4 1.521424397065789 3.434934879947899 5 0.7435967130392989 2.0985320492751116 6 0.4566011124322976 1.5463092582926008 7 0.29367337010618677 1.1603012166830968 8 0.20797798250646438 0.9391078883057467 9 0.14931782861088022 0.7585117551921883 >10 0.7944833806609741 8.211859056467706 >50 0.0710026470943476 2.811377755790552 >100 0.06762453897986674 7.7780856724465774 >500 0.006364519487084357 2.468173301306253 >1k 0.0021593905402607643 1.888079446339197 >5k 2.273042673958699E-4 1.0665952147005684 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 9601 0.613225382842719 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 7026 0.44875758148661005 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 3000 0.19161297245371908 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 2785 0.1778807094278692 No Hit GCTTCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTG 2555 0.16319038153975074 No Hit GCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACCACTGCTTCCA 2071 0.13227682198388407 No Hit CATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATCAAC 1831 0.11694778418758654 No Hit GTATCAACGCAGAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGG 1773 0.11324326672014796 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 6.387099081790636E-5 6.387099081790636E-5 7 0.0 0.0 0.0 1.277419816358127E-4 6.387099081790636E-5 8 0.0 0.0 0.0 1.277419816358127E-4 6.387099081790636E-5 9 0.0 0.0 0.0 1.277419816358127E-4 6.387099081790636E-5 10 0.0 0.0 0.0 1.9161297245371908E-4 1.277419816358127E-4 11 0.0 0.0 0.0 1.9161297245371908E-4 1.277419816358127E-4 12 0.0 0.0 0.0 1.9161297245371908E-4 3.8322594490743816E-4 13 0.0 0.0 0.0 1.9161297245371908E-4 4.470969357253445E-4 14 0.0 0.0 0.0 1.9161297245371908E-4 4.470969357253445E-4 15 0.0 0.0 0.0 1.9161297245371908E-4 6.387099081790636E-4 16 0.0 0.0 0.0 1.9161297245371908E-4 7.025808989969699E-4 17 0.0 0.0 0.0 3.8322594490743816E-4 7.025808989969699E-4 18 0.0 0.0 0.0 5.109679265432508E-4 7.664518898148763E-4 19 0.0 0.0 0.0 5.109679265432508E-4 7.664518898148763E-4 20 0.0 0.0 0.0 5.748389173611572E-4 7.664518898148763E-4 21 0.0 0.0 0.0 6.387099081790636E-4 7.664518898148763E-4 22 0.0 0.0 0.0 0.001085806843904408 8.303228806327827E-4 23 0.0 0.0 0.0 0.0024270976510804418 8.303228806327827E-4 24 0.0 0.0 0.0 0.00351290449498485 8.94193871450689E-4 25 0.0 0.0 0.0 0.00421548539398182 8.94193871450689E-4 26 0.0 0.0 0.0 0.00542903421952204 0.0010219358530865017 27 0.0 0.0 0.0 0.007536776916512951 0.001085806843904408 28 0.0 0.0 0.0 0.011177423393133613 0.001085806843904408 29 0.0 0.0 0.0 0.016478715631019842 0.001085806843904408 30 0.0 0.0 0.0 0.026442590198613232 0.001085806843904408 31 0.0 0.0 0.0 0.05039421175532812 0.001085806843904408 32 0.0 0.0 0.0 0.0802219644672904 0.0011496778347223145 33 0.0 0.0 0.0 0.10953874925270941 0.0011496778347223145 34 0.0 0.0 0.0 0.14696714987200254 0.0011496778347223145 35 0.0 0.0 0.0 0.1908465205639042 0.0011496778347223145 36 0.0 0.0 0.0 0.25880525479415656 0.0011496778347223145 37 0.0 0.0 0.0 0.367641423147869 0.0011496778347223145 38 0.0 0.0 0.0 0.49544727577449965 0.0013412908071760337 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTCGTA 85 2.3536995E-7 23.293983 42 ATTCGTG 155 0.0 22.709545 44 TCGTATA 50 0.0025808618 21.999872 44 CGCGCGA 55 0.0044843443 19.999884 10 AACGAAT 105 1.7934763E-6 18.857033 31 TAGGACG 315 0.0 18.857033 4 CGTCGTA 340 0.0 18.764597 10 GTCGTAT 120 3.163641E-7 18.333227 43 ATACCGT 360 0.0 18.333227 6 GATATAC 235 0.0 17.79054 1 GTATAGG 200 3.6379788E-12 17.603271 1 GTATAGA 200 3.6379788E-12 17.603271 1 TACGCTG 75 0.0012911514 17.599897 5 TACCGTC 350 0.0 17.599897 7 GTCGTAG 350 0.0 16.97133 11 TATGGCG 430 0.0 16.883621 16 GTATTAC 170 2.4629117E-9 16.826656 1 TCCAACG 145 1.2499913E-7 16.689558 28 AATCACG 265 0.0 16.603678 34 CCGTCGT 360 0.0 16.499905 9 >>END_MODULE