##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062340_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1277527 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.06409336162758 32.0 32.0 32.0 32.0 32.0 2 30.70390606225935 32.0 32.0 32.0 32.0 32.0 3 30.738459539406996 32.0 32.0 32.0 32.0 32.0 4 30.590915886709244 32.0 32.0 32.0 32.0 32.0 5 30.635952116863283 32.0 32.0 32.0 32.0 32.0 6 33.983502501317 36.0 36.0 36.0 32.0 36.0 7 33.97608426279836 36.0 36.0 36.0 32.0 36.0 8 33.908488039783116 36.0 36.0 36.0 32.0 36.0 9 34.092902928861776 36.0 36.0 36.0 32.0 36.0 10 33.74040392101302 36.0 36.0 36.0 32.0 36.0 11 34.13948198355103 36.0 36.0 36.0 32.0 36.0 12 33.88210894955645 36.0 36.0 36.0 32.0 36.0 13 34.02758063038981 36.0 36.0 36.0 32.0 36.0 14 33.87199722589033 36.0 36.0 36.0 32.0 36.0 15 33.79212728967764 36.0 36.0 36.0 32.0 36.0 16 33.83398707033198 36.0 36.0 36.0 32.0 36.0 17 33.73615273884622 36.0 36.0 36.0 32.0 36.0 18 33.78096431621406 36.0 36.0 36.0 32.0 36.0 19 33.74147004329458 36.0 36.0 36.0 32.0 36.0 20 33.68816079816708 36.0 36.0 36.0 32.0 36.0 21 33.66806572385554 36.0 36.0 36.0 32.0 36.0 22 33.629541293452114 36.0 36.0 36.0 27.0 36.0 23 33.59397335633611 36.0 36.0 36.0 27.0 36.0 24 33.588671707134175 36.0 36.0 36.0 27.0 36.0 25 32.858607293622754 36.0 32.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 11.0 4 50.0 5 129.0 6 204.0 7 50.0 8 189.0 9 215.0 10 139.0 11 70.0 12 105.0 13 67.0 14 337.0 15 640.0 16 929.0 17 1249.0 18 1567.0 19 1997.0 20 2345.0 21 3136.0 22 4113.0 23 5606.0 24 7453.0 25 10386.0 26 14031.0 27 19143.0 28 26900.0 29 37177.0 30 51628.0 31 76219.0 32 117714.0 33 176473.0 34 352011.0 35 365244.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.01260347965634 18.145566275906607 11.45280544846077 26.38902479597628 2 16.432703996843795 20.003162468698214 37.44339455006446 26.120738984393533 3 18.956370624635507 23.828206643626242 28.504655704852972 28.710767026885275 4 12.505763935807174 15.68643876057961 35.96022669001729 35.84757061359592 5 14.48477345567502 36.65348815539211 33.66682875530801 15.194909633624858 6 33.85154406018052 35.57728601880407 17.018492385810653 13.55267753520476 7 29.818960257104166 30.61516541720289 21.227307369656163 18.338566956036786 8 27.651796773336823 33.37644847688117 19.76760128076263 19.20415346901938 9 27.283696506377435 14.305839471533663 19.271141434948134 39.13932258714077 10 15.891607733975324 26.845251529742203 31.734784080650012 25.52835665563246 11 36.96807072511107 21.092537140322516 22.808393787337224 19.130998347229202 12 24.443280966369564 24.036028805487717 29.05645411594303 22.464236112199696 13 29.172423467528507 19.749425364823786 25.5733616921899 25.504789475457805 14 23.095141437051225 20.341401940791897 25.18844427864518 31.3750123435117 15 24.838396479319684 28.007541628236282 22.248900375122343 24.905161517321687 16 25.360233709161236 25.899134561434856 24.463450031188387 24.27718169821552 17 23.63937594486421 26.12249280355367 25.706732958352696 24.531398293229422 18 24.40972899850066 25.0756918465989 26.857105236551227 23.657473918349208 19 25.2871788440738 25.198767889893876 25.464079130939133 24.04997413509319 20 25.40244306707032 24.81734206152103 25.18167832924118 24.598536542167476 21 26.320595226991816 24.566045632710836 24.514708637077224 24.598650503220124 22 25.467422873560064 25.029847177746507 25.006643593733465 24.49608635495996 23 24.052437686157706 24.831870199090766 25.66217275435021 25.453519360401316 24 24.473133078965766 25.386332498330518 25.540269813550875 24.600264609152845 25 24.287851724243335 25.14505526717366 25.608025124363877 24.95906788421913 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 121.0 1 121.0 2 348.0 3 575.0 4 575.0 5 575.0 6 1311.5 7 2048.0 8 2048.0 9 2048.0 10 2359.0 11 2670.0 12 2670.0 13 2670.0 14 3382.5 15 4095.0 16 4095.0 17 4095.0 18 6781.5 19 9468.0 20 9468.0 21 9468.0 22 15341.0 23 21214.0 24 21214.0 25 21214.0 26 31244.5 27 41275.0 28 41275.0 29 41275.0 30 51600.0 31 61925.0 32 61925.0 33 61925.0 34 75072.5 35 88220.0 36 88220.0 37 88220.0 38 98140.5 39 108061.0 40 108061.0 41 108061.0 42 121946.0 43 135831.0 44 135831.0 45 135831.0 46 151055.0 47 166279.0 48 166279.0 49 166279.0 50 166755.5 51 167232.0 52 167232.0 53 167232.0 54 153529.5 55 139827.0 56 139827.0 57 139827.0 58 127653.5 59 115480.0 60 115480.0 61 115480.0 62 102037.0 63 88594.0 64 88594.0 65 88594.0 66 73347.0 67 58100.0 68 58100.0 69 58100.0 70 44242.5 71 30385.0 72 30385.0 73 30385.0 74 23648.0 75 16911.0 76 16911.0 77 16911.0 78 14192.5 79 11474.0 80 11474.0 81 11474.0 82 7969.0 83 4464.0 84 4464.0 85 4464.0 86 3284.0 87 2104.0 88 2104.0 89 2104.0 90 1365.0 91 626.0 92 626.0 93 626.0 94 368.5 95 111.0 96 111.0 97 111.0 98 274.0 99 437.0 100 437.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007984175676913287 2 0.0034441542135704374 3 0.004853126391849252 4 0.01471593163980096 5 0.035067751992717174 6 0.04453917608003588 7 0.06622169237910432 8 0.08610385533926093 9 0.09627976551571904 10 0.11702296702926827 11 0.11647503340438206 12 0.1298602690980308 13 0.11741434818990128 14 0.12156298849261112 15 0.1103694872985072 16 0.11044776353063379 17 0.12132815979623132 18 0.12759025836635937 19 0.13048647895504362 20 0.11804055804691407 21 0.1286861256161318 22 0.1457503442197308 23 0.13518305288263965 24 0.13173889866906924 25 0.1279033632948658 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1277527.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.311858390488766 #Duplication Level Percentage of deduplicated Percentage of total 1 83.10344089694806 47.6281263644824 2 10.928518368434178 12.526673942991101 3 2.669153560705249 4.589224526808243 4 1.0680178860177576 2.4484035936783566 5 0.5531700904569826 1.5851602945062226 6 0.31649052457450405 1.088319607580729 7 0.21147197904533682 0.8483896481621925 8 0.14848999441708116 0.6808190025948979 9 0.1148407837228145 0.5923564860757222 >10 0.6806996241817608 7.504906623611229 >50 0.09729923444132511 3.893696229972263 >100 0.09693831097764218 11.448131537785956 >500 0.009011157632293867 3.4663711784451947 >1k 0.002457588445171055 1.6994209633055541 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 1874 0.14668965900524997 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1473 0.11530088992248305 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1289 0.1008980632111885 No Hit TATCAACGCAGAGTACTTTTTTTTT 1287 0.10074151074693528 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 7.827623212660085E-5 0.0 2 0.0 0.0 0.0 7.827623212660085E-5 0.0 3 0.0 0.0 0.0 7.827623212660085E-5 0.0 4 0.0 0.0 0.0 7.827623212660085E-5 0.0 5 0.0 0.0 0.0 7.827623212660085E-5 0.0 6 0.0 0.0 0.0 7.827623212660085E-5 0.0 7 0.0 0.0 0.0 7.827623212660085E-5 0.0 8 0.0 0.0 0.0 7.827623212660085E-5 0.0 9 0.0 0.0 0.0 2.3482869637980253E-4 0.0 10 0.0 0.0 0.0 2.3482869637980253E-4 0.0 11 0.0 0.0 0.0 2.3482869637980253E-4 0.0 12 0.0 0.0 0.0 2.3482869637980253E-4 0.0 13 0.0 0.0 0.0 2.3482869637980253E-4 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTTCT 275 0.0 15.89186 12 CGGTCGG 135 1.8189894E-12 13.370646 10 AAGACGG 245 0.0 13.182912 5 GCGGTCG 140 3.6379788E-12 12.892618 9 GGTTCTA 335 0.0 12.4788475 13 GCGTAAC 130 1.9826984E-10 12.422846 11 CGAACGA 115 5.298716E-9 12.394475 16 CGCGCTA 100 1.4368197E-7 12.35316 16 GCGCGCT 100 1.4382931E-7 12.352192 15 GACTTAG 55 0.0030683544 12.090685 7 CTATTTT 375 0.0 11.91018 17 CAAGACG 265 0.0 11.828578 4 CGCAAGA 290 0.0 11.78734 2 ACCCGCA 65 8.02294E-4 11.692091 7 CGCGTAT 65 8.02294E-4 11.692091 7 AACGGAC 90 7.442799E-6 11.613172 15 CGCGTAA 140 6.7848305E-10 11.535953 10 GGTCGGC 165 7.2759576E-12 11.514937 11 CGGTCCA 215 0.0 11.488609 10 GTCCTAA 365 0.0 11.446459 1 >>END_MODULE