##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062339_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1283400 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.16259700794764 32.0 32.0 32.0 32.0 32.0 2 30.822953872526103 32.0 32.0 32.0 32.0 32.0 3 30.818353592021193 32.0 32.0 32.0 32.0 32.0 4 30.87605734767025 32.0 32.0 32.0 32.0 32.0 5 30.67817749727287 32.0 32.0 32.0 32.0 32.0 6 34.31528907589216 36.0 36.0 36.0 32.0 36.0 7 34.19486052672588 36.0 36.0 36.0 32.0 36.0 8 34.19215599189653 36.0 36.0 36.0 32.0 36.0 9 34.34913822658563 36.0 36.0 36.0 32.0 36.0 10 34.027695963846035 36.0 36.0 36.0 32.0 36.0 11 34.34343384759233 36.0 36.0 36.0 32.0 36.0 12 34.12112124045504 36.0 36.0 36.0 32.0 36.0 13 34.23756895745676 36.0 36.0 36.0 32.0 36.0 14 34.150853202431044 36.0 36.0 36.0 32.0 36.0 15 34.0834572230014 36.0 36.0 36.0 32.0 36.0 16 34.09065061555244 36.0 36.0 36.0 32.0 36.0 17 34.011848215677105 36.0 36.0 36.0 32.0 36.0 18 34.03383045036622 36.0 36.0 36.0 32.0 36.0 19 34.001661991584854 36.0 36.0 36.0 32.0 36.0 20 33.989759233286584 36.0 36.0 36.0 32.0 36.0 21 33.95654667290011 36.0 36.0 36.0 32.0 36.0 22 33.900070126227206 36.0 36.0 36.0 32.0 36.0 23 33.87183964469378 36.0 36.0 36.0 32.0 36.0 24 33.84304971170329 36.0 36.0 36.0 32.0 36.0 25 33.367794919744426 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 9.0 4 60.0 5 127.0 6 216.0 7 55.0 8 170.0 9 239.0 10 141.0 11 40.0 12 90.0 13 67.0 14 218.0 15 266.0 16 438.0 17 605.0 18 780.0 19 1099.0 20 1748.0 21 2599.0 22 3898.0 23 5846.0 24 7862.0 25 11215.0 26 15486.0 27 19753.0 28 26850.0 29 35778.0 30 46451.0 31 63491.0 32 91955.0 33 131537.0 34 289849.0 35 524462.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.08292786320097 17.632573927517214 11.358436636005747 25.926061573276066 2 16.09718011234668 20.135286660136874 38.28958451676044 25.477948710756 3 18.99731480658971 24.49767558562307 28.302920362119295 28.20208924566792 4 12.283653565152337 15.579515034854676 36.1535554109501 35.98327598904289 5 14.179174279318321 37.121186139465856 33.81833459084985 14.881304990365967 6 33.84805950649274 35.734687227650376 17.177962891072625 13.239290374784263 7 29.80858296817253 30.41706301557846 21.27777691144136 18.496577104807645 8 27.764641290717044 33.82002458152144 19.69734781605036 18.71798631171116 9 27.5493889265854 14.071612968639105 18.682000046795665 39.69699805797983 10 15.932096819993072 27.02069766063076 31.809508504669687 25.237697014706477 11 37.48908826665897 20.799811526378896 22.655137739424298 19.05596246753784 12 24.687158417718706 23.60119495770914 29.55288951790525 22.158757106666908 13 29.94131937022469 19.721434734376924 25.318874068341636 25.018371827056747 14 23.108926725567063 20.405593587268154 25.15085912663585 31.33462056052893 15 24.95237798076398 28.520714213281124 22.329149668088956 24.19775813786594 16 25.178360533997317 25.59569220112422 25.205506593840344 24.020440671038116 17 23.36552931456964 26.123836338005535 26.106517443325476 24.40411690409935 18 24.286147847111316 24.674135142536375 27.97549898848677 23.06421802186554 19 25.51550393342628 25.05440010860516 25.201391581695347 24.228704376273207 20 25.348631840407904 24.70191938639548 25.83136485191923 24.118083921277385 21 26.37406533597973 24.458862300116092 24.07688274725686 25.09018961664732 22 25.343064918768626 25.485714374898066 24.869621674601607 24.301599031731698 23 23.783537049246842 25.053429098669245 25.67280870471011 25.490225147373803 24 24.64217138478991 25.5397370188868 25.586784313511313 24.231307282811976 25 24.511732235854026 25.124500185297162 25.722288322378045 24.64147925647077 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 190.0 1 190.0 2 462.5 3 735.0 4 735.0 5 735.0 6 1988.0 7 3241.0 8 3241.0 9 3241.0 10 3250.5 11 3260.0 12 3260.0 13 3260.0 14 3496.5 15 3733.0 16 3733.0 17 3733.0 18 6084.5 19 8436.0 20 8436.0 21 8436.0 22 14623.5 23 20811.0 24 20811.0 25 20811.0 26 32438.0 27 44065.0 28 44065.0 29 44065.0 30 56368.5 31 68672.0 32 68672.0 33 68672.0 34 79318.5 35 89965.0 36 89965.0 37 89965.0 38 98300.5 39 106636.0 40 106636.0 41 106636.0 42 119826.0 43 133016.0 44 133016.0 45 133016.0 46 152517.0 47 172018.0 48 172018.0 49 172018.0 50 167441.0 51 162864.0 52 162864.0 53 162864.0 54 148534.0 55 134204.0 56 134204.0 57 134204.0 58 123815.0 59 113426.0 60 113426.0 61 113426.0 62 101385.5 63 89345.0 64 89345.0 65 89345.0 66 74990.0 67 60635.0 68 60635.0 69 60635.0 70 45878.0 71 31121.0 72 31121.0 73 31121.0 74 24376.5 75 17632.0 76 17632.0 77 17632.0 78 14527.5 79 11423.0 80 11423.0 81 11423.0 82 7923.0 83 4423.0 84 4423.0 85 4423.0 86 3274.0 87 2125.0 88 2125.0 89 2125.0 90 1414.0 91 703.0 92 703.0 93 703.0 94 424.0 95 145.0 96 145.0 97 145.0 98 360.5 99 576.0 100 576.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009038491506934705 2 0.003973819541841982 3 0.005142589995324918 4 0.016752376499922082 5 0.03490727754402369 6 0.04534829359513791 7 0.06700950599968833 8 0.08851488234377436 9 0.09583917718560074 10 0.11812373383200873 11 0.11866916004363409 12 0.13098020882032102 13 0.12046127473897458 14 0.12272089761570827 15 0.1114227832320399 16 0.11266947171575503 17 0.12178588125292193 18 0.1291101760947483 19 0.13191522518310736 20 0.11937042231572387 21 0.12903225806451613 22 0.15092722455976312 23 0.13986286426679134 24 0.1333177497272869 25 0.13051270063892786 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1283400.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.6535083907149 #Duplication Level Percentage of deduplicated Percentage of total 1 76.86676873544835 37.39837977637278 2 13.60180126838541 13.235507042804523 3 4.368702587976414 6.376581240619451 4 1.7925514706122643 3.488556720648886 5 0.8914137444112677 2.16852030466561 6 0.5157188698649369 1.5054919417334227 7 0.35438262734732684 1.206937069321673 8 0.23488481608840203 0.9142376296326875 9 0.16342615747239275 0.7156130331460819 >10 0.9565592973257375 8.739958574512999 >50 0.11272284172846223 3.824753985517619 >100 0.12309310747874412 12.565780470918387 >500 0.012838911328747581 4.249158507354026 >1k 0.005135564531499032 3.610523702751799 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 3263 0.2542465326476547 No Hit TCCATGTACTCTGCGTTGATACCAC 2727 0.21248246844319776 No Hit GTATCAACGCAGAGTACTTTTTTTT 2631 0.20500233754090694 No Hit TATCAACGCAGAGTACTTTTTTTTT 1945 0.1515505688016207 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 1835 0.14297958547607917 No Hit GTCCTAAAGTGTGTATTTCTCATTT 1780 0.13869409381330838 No Hit GTCCTACAGTGGACATTTCTAAATT 1613 0.12568178276453174 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 1432 0.11157861929250429 No Hit CTTTAGGACGTGAAATATGGCGAGG 1417 0.11040984883902134 No Hit GAATAGGACCGCGGTTCTATTTTGT 1409 0.1097865045971638 No Hit CTATTGGAGCTGGAATTACCGCGGC 1380 0.10752688172043011 No Hit CTGTAGGACGTGGAATATGGCAAGA 1373 0.10698145550880475 No Hit GTCTTGCGCCGGTCCAAGAATTTCA 1340 0.10441016051114227 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1330 0.10363098020882032 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.116721209287829E-4 2 0.0 0.0 0.0 0.0 3.116721209287829E-4 3 0.0 0.0 0.0 0.0 3.116721209287829E-4 4 0.0 0.0 0.0 0.0 3.116721209287829E-4 5 0.0 0.0 0.0 0.0 3.116721209287829E-4 6 0.0 0.0 0.0 0.0 3.8959015116097863E-4 7 0.0 0.0 0.0 7.791803023219573E-5 3.8959015116097863E-4 8 0.0 0.0 0.0 7.791803023219573E-5 3.8959015116097863E-4 9 0.0 0.0 0.0 1.5583606046439146E-4 3.8959015116097863E-4 10 0.0 0.0 0.0 1.5583606046439146E-4 4.675081813931744E-4 11 0.0 0.0 0.0 2.337540906965872E-4 4.675081813931744E-4 12 0.0 0.0 0.0 3.8959015116097863E-4 4.675081813931744E-4 13 0.0 0.0 0.0 3.8959015116097863E-4 7.012622720897616E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTGTAAG 40 2.775031E-4 16.613676 1 AACCGCG 135 0.0 15.4830065 7 GACCGAG 40 0.0052749864 14.251404 7 CTCGTAG 100 6.5847416E-10 14.250849 10 TACGGCC 40 0.0052859182 14.246958 4 TCGCCAG 175 0.0 14.11788 17 TTAACCA 175 0.0 14.111272 4 GCTCGTA 115 2.5465852E-11 14.044313 9 GAACCGC 210 0.0 13.572767 6 GGACCGA 65 5.4459968E-5 13.155142 6 ATCGCCA 205 0.0 12.978408 16 TAACCAG 220 0.0 12.521031 5 GTCCTAG 160 0.0 12.460257 1 CGCGGTC 145 7.2759576E-12 12.449018 10 TATTAGC 100 1.4508078E-7 12.343994 2 GCGTTAT 100 1.4545003E-7 12.341588 1 CGTCGTA 170 0.0 12.294849 10 ACGAAAT 70 1.0892132E-4 12.215966 12 AGAACCG 210 0.0 12.212632 5 CTTACAC 70 1.0943814E-4 12.209773 3 >>END_MODULE