##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062338_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2232696 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.137688247750702 32.0 32.0 32.0 32.0 32.0 2 30.758955540745358 32.0 32.0 32.0 32.0 32.0 3 30.759222930484043 32.0 32.0 32.0 32.0 32.0 4 30.82797523711244 32.0 32.0 32.0 32.0 32.0 5 30.602895781602154 32.0 32.0 32.0 32.0 32.0 6 34.271175296592105 36.0 36.0 36.0 32.0 36.0 7 34.13318696320502 36.0 36.0 36.0 32.0 36.0 8 34.12349778026207 36.0 36.0 36.0 32.0 36.0 9 34.2985180248453 36.0 36.0 36.0 32.0 36.0 10 33.933840970736725 36.0 36.0 36.0 32.0 36.0 11 34.30119864056728 36.0 36.0 36.0 32.0 36.0 12 34.057432807690795 36.0 36.0 36.0 32.0 36.0 13 34.18502026249879 36.0 36.0 36.0 32.0 36.0 14 34.08081754076686 36.0 36.0 36.0 32.0 36.0 15 34.01944734079337 36.0 36.0 36.0 32.0 36.0 16 34.01718863651836 36.0 36.0 36.0 32.0 36.0 17 33.93649202578408 36.0 36.0 36.0 32.0 36.0 18 33.95813760583617 36.0 36.0 36.0 32.0 36.0 19 33.93138250796347 36.0 36.0 36.0 32.0 36.0 20 33.90754675065482 36.0 36.0 36.0 32.0 36.0 21 33.865543719342 36.0 36.0 36.0 32.0 36.0 22 33.81559289755524 36.0 36.0 36.0 32.0 36.0 23 33.771165443033894 36.0 36.0 36.0 32.0 36.0 24 33.73183944433098 36.0 36.0 36.0 27.0 36.0 25 33.2518865085081 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 2.0 3 12.0 4 86.0 5 213.0 6 328.0 7 103.0 8 334.0 9 398.0 10 232.0 11 87.0 12 178.0 13 113.0 14 399.0 15 467.0 16 797.0 17 1160.0 18 1504.0 19 2368.0 20 3504.0 21 5082.0 22 7506.0 23 10870.0 24 14824.0 25 20467.0 26 28411.0 27 36247.0 28 48874.0 29 64674.0 30 83721.0 31 113844.0 32 162502.0 33 232018.0 34 500135.0 35 891236.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.32864920165805 17.256154753724744 11.781579590970132 25.633616453647072 2 15.596101803171338 19.981259702717253 39.226165468225254 25.196473025886156 3 19.528366918497543 24.532570569604804 27.937281615062016 28.001780896835637 4 12.279408964971969 15.887347666477778 36.09157145704872 35.741671911501534 5 14.081459746616073 37.175580624826104 33.7766230321571 14.966336596400726 6 33.53829140072304 35.310188396523515 17.59431028518477 13.55720991756868 7 29.785583383418107 30.395609212371543 21.11390330927023 18.704904094940115 8 27.621068693940547 34.161519361622105 19.73391357906812 18.48349836536923 9 27.422715722614043 14.988012172531468 18.64255113879878 38.94672096605571 10 15.882570551610797 27.187822994881405 31.89603180119322 25.033574652314577 11 36.91433286175191 21.025028193992608 22.825901254884904 19.234737689370583 12 25.18095631037483 23.48337533971352 29.571624615439813 21.76404373447184 13 30.303996441349756 20.178928001456462 25.08081624746251 24.436259309731266 14 23.24113876539578 20.57974147015642 25.185000497759187 30.994119266688607 15 24.742750632334168 28.811794663238615 22.75282045027663 23.692634254150583 16 24.888140995030632 25.751626601885068 25.920664961934982 23.43956744114932 17 23.26906028070638 26.435224484835768 26.565716763594178 23.729998470863674 18 24.090303265131865 24.74307850164853 28.676547089867366 22.490071143352242 19 25.325792427461906 25.55110472088453 25.37956421086432 23.74353864078924 20 25.21670112061273 24.695811267113 26.692510863082557 23.394976749191716 21 25.650997579654565 24.791162801752765 24.452709087215403 25.105130531377263 22 24.96944224528289 26.04014111515059 25.236107715805034 23.754308923761485 23 23.161072985685063 25.840352812059763 25.944495698611743 25.054078503643428 24 24.238334918710727 25.937626275197296 26.03180711047367 23.792231695618305 25 24.451321948826223 25.414137681438902 25.75963735091806 24.374903018816816 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 361.0 1 361.0 2 869.5 3 1378.0 4 1378.0 5 1378.0 6 3425.5 7 5473.0 8 5473.0 9 5473.0 10 5456.0 11 5439.0 12 5439.0 13 5439.0 14 5638.0 15 5837.0 16 5837.0 17 5837.0 18 10091.0 19 14345.0 20 14345.0 21 14345.0 22 24603.5 23 34862.0 24 34862.0 25 34862.0 26 54955.0 27 75048.0 28 75048.0 29 75048.0 30 98531.5 31 122015.0 32 122015.0 33 122015.0 34 141633.5 35 161252.0 36 161252.0 37 161252.0 38 177147.0 39 193042.0 40 193042.0 41 193042.0 42 218896.5 43 244751.0 44 244751.0 45 244751.0 46 284029.5 47 323308.0 48 323308.0 49 323308.0 50 306403.0 51 289498.0 52 289498.0 53 289498.0 54 257408.5 55 225319.0 56 225319.0 57 225319.0 58 205699.5 59 186080.0 60 186080.0 61 186080.0 62 164185.0 63 142290.0 64 142290.0 65 142290.0 66 118335.0 67 94380.0 68 94380.0 69 94380.0 70 71707.5 71 49035.0 72 49035.0 73 49035.0 74 38542.5 75 28050.0 76 28050.0 77 28050.0 78 22947.5 79 17845.0 80 17845.0 81 17845.0 82 12576.5 83 7308.0 84 7308.0 85 7308.0 86 5389.0 87 3470.0 88 3470.0 89 3470.0 90 2311.5 91 1153.0 92 1153.0 93 1153.0 94 700.5 95 248.0 96 248.0 97 248.0 98 578.5 99 909.0 100 909.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008689046784694378 2 0.003314378670450433 3 0.005061145807579715 4 0.015273015224643211 5 0.03345730901116856 6 0.045684678971073533 7 0.06624278450805662 8 0.08586032312504703 9 0.09405669199926904 10 0.11604804236671719 11 0.11694382038575785 12 0.12881287913804657 13 0.1181083318105107 14 0.12101961037239282 15 0.1104942186486651 16 0.10897139601629599 17 0.11998946565049608 18 0.1268421674961571 19 0.12997739056279942 20 0.11940720993811967 21 0.1276035788123417 22 0.14829605105218086 23 0.13736755921988483 24 0.13181373550183278 25 0.12908161254375877 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2232696.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.75939383622056 #Duplication Level Percentage of deduplicated Percentage of total 1 72.21910022922245 32.32483149657254 2 15.288760114739652 13.686312704862654 3 5.463609760547477 7.336435831192897 4 2.4461786931168206 4.379579020759483 5 1.3223336970585626 2.9593427364774887 6 0.7544103718012949 2.026017056735024 7 0.4903409039645942 1.5363153144191772 8 0.3273233947659387 1.1720637390509878 9 0.2385853325005455 0.9611041374843796 >10 1.2206487023115675 9.906047319520765 >50 0.10905697554030012 3.402497197156372 >100 0.09742700384801603 9.227407578612695 >500 0.014616323446355668 4.400062648546746 >1k 0.0073081617231778315 5.596788277700346 >5k 2.0022360885418717E-4 0.620297033900225 >10k+ 1.0011180442709359E-4 0.46489790700822325 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 10375 0.46468484737734117 No Hit TCCATGTACTCTGCGTTGATACCAC 8486 0.38007861347895106 No Hit GTATCAACGCAGAGTACTTTTTTTT 5357 0.23993414240004013 No Hit GAGTACATGGAAGCAGTGGTATCAA 3854 0.1726164242691347 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 3645 0.16325554397015984 No Hit TATCAACGCAGAGTACTTTTTTTTT 3604 0.1614191990311265 No Hit GTCCTAAAGTGTGTATTTCTCATTT 3276 0.1467284395188597 No Hit GTCCTACAGTGGACATTTCTAAATT 3223 0.14435462776840197 No Hit CATGTACTCTGCGTTGATACCACTG 3181 0.14247349392841657 No Hit GTCCTACAGTGTGCATTTCTCATTT 2829 0.12670780079330102 No Hit CTGTAGGACGTGGAATATGGCAAGA 2747 0.12303511091523432 No Hit CTTTAGGACGTGAAATATGGCGAGG 2705 0.12115397707524894 No Hit CCCATGTACTCTGCGTTGATACCAC 2586 0.11582409786195702 No Hit GCTTCCATGTACTCTGCGTTGATAC 2510 0.11242014138960253 No Hit GTACATGGGAAGCAGTGGTATCAAC 2471 0.11067337425247324 No Hit GAGTACTTTTTTTTTTTTTTTTTTT 2407 0.10780688459154314 No Hit CTGTAGGACCTGGAATATGGCGAGA 2368 0.10606011745441385 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.957780190406576E-5 2 0.0 0.0 0.0 0.0 8.957780190406576E-5 3 0.0 0.0 0.0 0.0 8.957780190406576E-5 4 0.0 0.0 0.0 0.0 8.957780190406576E-5 5 0.0 0.0 0.0 0.0 8.957780190406576E-5 6 0.0 0.0 0.0 0.0 1.3436670285609865E-4 7 0.0 0.0 0.0 4.478890095203288E-5 1.7915560380813152E-4 8 0.0 0.0 0.0 4.478890095203288E-5 1.7915560380813152E-4 9 0.0 0.0 0.0 4.478890095203288E-5 1.7915560380813152E-4 10 0.0 0.0 0.0 4.478890095203288E-5 1.7915560380813152E-4 11 0.0 0.0 0.0 4.478890095203288E-5 1.7915560380813152E-4 12 0.0 0.0 0.0 4.478890095203288E-5 4.478890095203288E-4 13 0.0 0.0 0.0 4.478890095203288E-5 4.926779104723616E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTTAA 30 7.764675E-4 18.985228 1 CTCGACG 100 0.0 17.10204 13 TCGACGC 110 0.0 15.547308 14 ACGCTTA 115 3.765308E-10 13.220154 17 CGTGCGC 80 1.9973322E-6 13.064351 10 AATATCG 75 1.477453E-5 12.668178 14 GACGCTT 130 1.9826984E-10 12.425116 16 ACGGTAT 390 0.0 12.181486 9 CGAATTG 55 0.0030664252 12.092351 14 CGAACGA 160 3.6379788E-12 11.876948 16 CGCAATA 185 0.0 11.803216 2 CGCATCG 250 0.0 11.7814045 13 AGGACCT 1475 0.0 11.206105 5 CCAACGA 170 1.0913936E-11 11.178806 19 TAACGAA 170 1.0913936E-11 11.177803 13 TGTAGGA 2145 0.0 11.153663 2 CGACGCT 145 1.2169039E-9 11.139009 15 CGGTCCA 350 0.0 11.130149 10 TGCGCTA 60 0.0058708214 11.084904 10 CGACTCG 60 0.005871802 11.084655 14 >>END_MODULE