##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062336_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 780102 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.120761131236684 32.0 32.0 32.0 32.0 32.0 2 31.24788168726654 32.0 32.0 32.0 32.0 32.0 3 31.38421257732963 32.0 32.0 32.0 32.0 32.0 4 31.523435396909633 32.0 32.0 32.0 32.0 32.0 5 31.430935954529023 32.0 32.0 32.0 32.0 32.0 6 34.983779044278826 36.0 36.0 36.0 36.0 36.0 7 34.99953724000195 36.0 36.0 36.0 36.0 36.0 8 34.931884548430844 36.0 36.0 36.0 36.0 36.0 9 35.054821036223466 36.0 36.0 36.0 36.0 36.0 10 34.958599003720025 36.0 36.0 36.0 32.0 36.0 11 35.06965371195049 36.0 36.0 36.0 36.0 36.0 12 34.991047324580634 36.0 36.0 36.0 36.0 36.0 13 35.00878090301012 36.0 36.0 36.0 36.0 36.0 14 34.97497763113029 36.0 36.0 36.0 32.0 36.0 15 34.94360993818757 36.0 36.0 36.0 32.0 36.0 16 34.96314712691417 36.0 36.0 36.0 32.0 36.0 17 34.943256138299866 36.0 36.0 36.0 32.0 36.0 18 34.946865922661395 36.0 36.0 36.0 32.0 36.0 19 34.92412658857432 36.0 36.0 36.0 32.0 36.0 20 34.8833165406575 36.0 36.0 36.0 32.0 36.0 21 34.86316532966202 36.0 36.0 36.0 32.0 36.0 22 34.865858567213 36.0 36.0 36.0 32.0 36.0 23 34.819596668128014 36.0 36.0 36.0 32.0 36.0 24 34.83261676037236 36.0 36.0 36.0 32.0 36.0 25 34.803476981215276 36.0 36.0 36.0 32.0 36.0 26 34.750730032739305 36.0 36.0 36.0 32.0 36.0 27 34.729162340309344 36.0 36.0 36.0 32.0 36.0 28 34.73242473420142 36.0 36.0 36.0 32.0 36.0 29 34.69341188716347 36.0 36.0 36.0 32.0 36.0 30 34.679159904730405 36.0 36.0 36.0 32.0 36.0 31 34.66278640485475 36.0 36.0 36.0 32.0 36.0 32 34.63233397683893 36.0 36.0 36.0 32.0 36.0 33 34.57870893806194 36.0 36.0 36.0 32.0 36.0 34 34.56047157935757 36.0 36.0 36.0 32.0 36.0 35 34.512627835847105 36.0 36.0 36.0 32.0 36.0 36 34.48732345257415 36.0 36.0 36.0 32.0 36.0 37 34.46012188149755 36.0 36.0 36.0 32.0 36.0 38 34.42965278899426 36.0 36.0 36.0 32.0 36.0 39 34.37838513425167 36.0 36.0 36.0 32.0 36.0 40 34.34669697039618 36.0 36.0 36.0 32.0 36.0 41 34.325313869211975 36.0 36.0 36.0 32.0 36.0 42 34.235640980282064 36.0 36.0 36.0 32.0 36.0 43 34.22049552494418 36.0 36.0 36.0 32.0 36.0 44 34.21507956651823 36.0 36.0 36.0 32.0 36.0 45 34.111346977702915 36.0 36.0 36.0 32.0 36.0 46 34.131613558227 36.0 36.0 36.0 32.0 36.0 47 34.05167401185999 36.0 36.0 36.0 32.0 36.0 48 33.9834598552497 36.0 36.0 36.0 32.0 36.0 49 33.9919843815296 36.0 36.0 36.0 32.0 36.0 50 33.43744664159302 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 7.0 21 24.0 22 58.0 23 222.0 24 558.0 25 1317.0 26 2885.0 27 5483.0 28 9690.0 29 14949.0 30 21576.0 31 31737.0 32 46369.0 33 72649.0 34 150047.0 35 422531.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.517525730901184 20.368694198431786 11.997497423063708 25.11628264760332 2 16.042083564616885 20.99101743824569 37.67112312147546 25.295775875661963 3 17.943212408665556 26.040635815921036 30.23945647993847 25.776695295474937 4 12.369167582146416 16.271354606647087 38.198515320452096 33.1609624907544 5 13.050105050499871 38.58692656463714 33.92958091324072 14.433387471622265 6 30.363186069406844 38.111206825826564 17.685387439494626 13.840219665271967 7 28.37910939851455 32.56651053323797 20.951106393779277 18.10327367446821 8 28.566008034846725 32.51164591297035 20.11211354412628 18.810232508056636 9 28.68970980717906 13.826525249262275 20.42207301096523 37.06169193259343 10 17.23966865871386 26.188242050398536 31.000433276674077 25.571656014213527 11 36.86069257609903 22.40014767299661 21.337722502954744 19.401437247949627 12 22.207736936964654 23.9012334284491 30.398717090841963 23.49231254374428 13 29.642918490146158 21.422583200658377 26.241696598649924 22.69280171054554 14 23.16171475012242 19.709217512581688 26.927888917090332 30.201178820205566 15 26.825594601731567 25.803164201604407 23.89174748943087 23.479493707233157 16 24.674465646800034 26.663436319865863 23.44731842759024 25.214779605743864 17 23.013144434958505 26.100689397027566 26.749194336125274 24.13697183188865 18 21.94777093251908 28.20861887291662 27.14375812393764 22.69985207062666 19 25.521021609994595 26.367833949919365 26.190036687510094 21.921107752575946 20 24.85969783438576 25.02518901374436 27.054667210185336 23.06044594168455 21 25.633314617832028 24.318742933616374 25.02634270903036 25.021599739521243 22 25.243237422798558 24.348354445957067 27.015954323921743 23.39245380732263 23 23.81150157287124 26.97198571468859 27.011980484603292 22.204532227836875 24 22.6945963476571 26.68484377683944 26.50127803800016 24.1192818375033 25 24.044676209008564 25.542429066968165 25.819187747243312 24.59370697677996 26 22.785610086886074 24.43103594145381 26.288228975185294 26.49512499647482 27 27.208749625049034 25.299512115082383 25.025573578839687 22.466164681028893 28 23.82726874177992 24.71471679344496 28.084532535488947 23.373481929286168 29 24.476414622703185 25.4617985853132 27.060435686615342 23.001351105368272 30 22.705620547056668 25.886743015656926 27.33796349708115 24.069672940205255 31 22.135182322311696 26.797905914867542 26.071334261417096 24.995577501403663 32 24.063519898679917 26.032493186788397 26.342580841992458 23.56140607253923 33 24.517178522808557 25.983397042950795 25.300537622003276 24.198886812237376 34 23.059035869668325 25.760605664387477 27.135810445300745 24.044548020643454 35 23.104414550917703 26.551143312028426 26.9823689722626 23.362073164791273 36 24.74894308692966 26.00070247224081 25.634596501483138 23.615757939346395 37 24.73535512022787 26.349631202073574 26.584472286957343 22.33054139074121 38 23.574353097415464 25.298614796526607 25.485897997954115 25.641134108103813 39 24.94609679247073 25.31835580475374 26.613314669107375 23.12223273366816 40 24.462570279271173 25.53691696726838 26.235928122219914 23.764584631240528 41 22.883674186196163 26.64510538365496 26.153503003453395 24.317717426695484 42 24.58242640065017 27.665997523400787 25.05659516319661 22.694980912752435 43 24.917382598685816 24.82521516417084 24.46039107706428 25.797011160079066 44 23.426423724077107 26.01505956913327 26.860205460311597 23.698311246478024 45 23.88046691330108 26.972370279783924 26.450387257051 22.696775549863993 46 23.750483911078295 25.683564456955626 26.505123688953496 24.06082794301258 47 24.598706323019297 24.837136682126186 27.30873654983579 23.25542044501873 48 23.177994672491543 28.691504444290615 25.11466449259199 23.01583639062584 49 23.56409802820657 25.853798605823343 26.778549471735747 23.803553894234344 50 21.63242755434546 27.618183263214295 25.99352392379458 24.755865258645667 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 21.0 1 30.0 2 39.0 3 86.5 4 134.0 5 134.0 6 134.0 7 155.0 8 176.0 9 234.0 10 292.0 11 407.0 12 522.0 13 920.0 14 1318.0 15 1956.0 16 2594.0 17 3097.5 18 3601.0 19 3987.5 20 4374.0 21 4860.5 22 5347.0 23 5538.5 24 5730.0 25 5381.0 26 5032.0 27 5547.5 28 6063.0 29 7331.5 30 8600.0 31 10782.5 32 12965.0 33 15774.0 34 18583.0 35 22625.5 36 26668.0 37 28928.0 38 31188.0 39 33172.5 40 35157.0 41 36610.5 42 38064.0 43 42378.0 44 46692.0 45 53683.5 46 60675.0 47 70255.5 48 79836.0 49 78884.5 50 77933.0 51 73962.5 52 69992.0 53 67129.5 54 64267.0 55 55454.0 56 46641.0 57 42055.5 58 37470.0 59 33653.0 60 29836.0 61 24535.5 62 19235.0 63 16921.5 64 14608.0 65 11577.5 66 8547.0 67 7059.5 68 5572.0 69 4789.5 70 4007.0 71 3378.5 72 2750.0 73 2251.5 74 1753.0 75 1703.0 76 1653.0 77 1386.5 78 1120.0 79 842.0 80 564.0 81 380.5 82 197.0 83 145.0 84 93.0 85 64.0 86 35.0 87 24.0 88 13.0 89 8.0 90 3.0 91 1.5 92 0.0 93 1.5 94 3.0 95 3.0 96 3.0 97 1.5 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.013587966701790279 2 0.004486592778893017 3 2.563767302224581E-4 4 1.2818836511122904E-4 5 1.2818836511122904E-4 6 7.691301906673743E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 780102.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.2981537050522 #Duplication Level Percentage of deduplicated Percentage of total 1 76.60178759658206 26.27299885069332 2 12.676931838990166 8.695907134443095 3 4.033014195430803 4.149748223086293 4 1.7568339688595127 2.4102464599280182 5 0.9243125587807084 1.5851107106285414 6 0.5639858282001557 1.1606203573848062 7 0.38108900864811673 0.9149454575743352 8 0.28885785256018476 0.7925832820816417 9 0.2379733918874746 0.7345843175402301 >10 1.8336954342607799 13.143603020634275 >50 0.35150784878042074 8.599226400731167 >100 0.3170683144766431 21.619910596755435 >500 0.026578335688124743 6.08722411382437 >1k 0.006363826854903108 3.8332910746944884 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATCCTAAGGTGTGCGAGAGAACTCTCGTTAAGGAACTCGGCAAAATGACC 4558 0.584282568176982 No Hit CCTTAGGATACTCTCCTCGACTACCTGTGTCGGTTTGCGGTACGGGTAGT 4187 0.536724684720716 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 3027 0.38802618119169036 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 2390 0.3063701926158374 No Hit TCCTTAGCCTGCTGCGTCCCTCCATCGTTCAAACAAATATAACTAGTACA 1541 0.19753827063640397 No Hit GAATATAACTACCCGTACCGCAAACCGACACAGGTAGTCGAGGAGAGTAT 1404 0.17997646461616557 No Hit GGCCTATTCACTGCGGCTGACCTTTCGGTCAGCACCCCTTCTCCCGAAGT 1401 0.17959189952083188 No Hit TTCCAGCACCGGGCAGGCGTCAGCCCCTATACGTCATCTTACGATTTTGC 1309 0.16779856993059883 No Hit GTTATATTCTAACTAGAAGCTTTTCTTGGCAGTGTGACATCAGTTACTTC 1280 0.1640811073423732 No Hit ATTCAGACTCGCTTTCGCTACGGCTCCGTCTTATCAACTTAACCTCGCAA 1240 0.15895357273792401 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATACC 1140 0.14613473622680112 No Hit CGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTA 1108 0.14203270854324176 No Hit GGCTAAGGAAGCGCACTGATGGATATGTGCGTCCAAGCAATAAGTCTGAA 1089 0.1395971296061284 No Hit GTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAAA 1069 0.13703336230390384 No Hit GAATAGGCCCAAACGACTGTTTATCAAAAACACAGGTTTCTGCAAAATCG 1049 0.13446959500167927 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1034 0.13254676952501082 No Hit AAGCTAGACCGTAAGGACTAGTGGAGCGCTTAGAAGTGAGAATGCCGGTA 1030 0.1320340160645659 No Hit GACTAGTGGAGCGCTTAGAAGTGAGAATGCCGGTATGAGTAGCGAAAGAC 975 0.12498365598344832 No Hit GTCTACGCCTCTCGGCCTCGACTTAGGTCCCGACTAACCCTGGGAGGACG 964 0.12357358396722479 No Hit AATATAACTAGTACAGGAATCTCAACCTGTTATCCATCGTCTACGCCTCT 961 0.12318901887189111 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 947 0.1213943817603339 No Hit ATTCAGACTCGCTTTCGCTGCGGCTCCGTCTTATCAACTTAACCTTGCTA 898 0.11511315186988368 No Hit TTTAAAGAGTGCGTAATAGCTCACTAGTCGAGTGATTCTGCGCCGAAAAT 893 0.11447221004432753 No Hit CCATTTAAAGAGTGCGTAATAGCTCACTAGTCGAGTGATTCTGCGCCGAA 892 0.11434402167921631 No Hit TTTCTTGGCAGTGTGACATCAGTTACTTCGCTACTTAATTTCGCTCCCCA 838 0.10742184996320994 No Hit GCTTAGAAGTGAGAATGCCGGTATGAGTAGCGAAAGACAGGTGAGAATCC 820 0.10511445939120781 No Hit ACTTAATTTCGCTCCCCATCACAACTTGTCCTTAAAGTTAAGCATTTAAC 803 0.10293525718431693 No Hit GTATTTAGCCTTGGGAGATGGTCCTCCCGGATTCCGACGGAATTTCTCGT 794 0.10178156189831586 No Hit ATTCTGGGCTTCGCCGAAGCTAACTCATCCTCTTAACCTTCCAGCACCGG 789 0.10114062007275972 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 1.2818836511122904E-4 0.0 13 0.0 0.0 0.0 1.2818836511122904E-4 0.0 14 0.0 0.0 0.0 1.2818836511122904E-4 0.0 15 0.0 0.0 0.0 1.2818836511122904E-4 0.0 16 0.0 0.0 0.0 1.2818836511122904E-4 0.0 17 0.0 0.0 0.0 1.2818836511122904E-4 0.0 18 0.0 0.0 0.0 2.563767302224581E-4 0.0 19 0.0 0.0 0.0 2.563767302224581E-4 0.0 20 0.0 0.0 0.0 2.563767302224581E-4 0.0 21 0.0 0.0 0.0 5.127534604449162E-4 0.0 22 0.0 0.0 0.0 7.691301906673743E-4 0.0 23 0.0 0.0 0.0 0.0014100720162235196 0.0 24 0.0 0.0 0.0 0.003589274223114413 0.0 25 0.0 0.0 0.0 0.004999346239337933 0.0 26 0.0 0.0 0.0 0.006024853160227765 0.0 27 0.0 0.0 0.0 0.008588620462452345 0.0 28 0.0 0.0 0.0 0.012947024876234134 0.0 29 0.0 0.0 0.0 0.02140745697357525 0.0 30 0.0 0.0 0.0 0.043712232502929105 0.0 31 0.0 0.0 0.0 0.07947678636896201 0.0 32 0.0 0.0 0.0 0.13357227644590067 0.0 33 0.0 0.0 0.0 0.18702682469728318 0.0 34 0.0 0.0 0.0 0.25099281888778646 0.0 35 0.0 0.0 0.0 0.3231628684454084 0.0 36 0.0 0.0 0.0 0.42212428631127724 0.0 37 0.0 0.0 0.0 0.5767194546354195 0.0 38 0.0 0.0 0.0 0.7545167170446941 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACCGTG 30 0.0057439045 29.333204 7 GTGTAAT 40 7.0221623E-4 27.505169 1 TAGGATA 680 0.0 26.529295 4 GATACTC 725 0.0 25.186096 7 CGCGAAT 70 1.1314514E-6 25.142746 13 ACTCTCC 725 0.0 24.579203 10 ATACTCT 725 0.0 24.579203 8 TACTCTC 725 0.0 24.579203 9 GTATGAC 55 1.5929584E-4 23.999897 3 AATGACC 845 0.0 23.692202 44 CGCGTGG 75 2.062785E-6 23.466564 10 TGTGCGA 895 0.0 23.351852 10 TCTCCTC 765 0.0 23.294016 12 AAATGAC 870 0.0 23.011395 43 TTGCGGT 785 0.0 22.980793 35 GGTGTGC 910 0.0 22.96693 8 ACTCTCG 930 0.0 22.946136 21 CTCCTCG 770 0.0 22.857042 13 GTGTGCG 925 0.0 22.83233 9 AGAGTTA 155 0.0 22.709578 40 >>END_MODULE