##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062335_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1869294 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.151929552012685 32.0 32.0 32.0 32.0 32.0 2 30.794683447333593 32.0 32.0 32.0 32.0 32.0 3 30.79394359581746 32.0 32.0 32.0 32.0 32.0 4 30.865350768792926 32.0 32.0 32.0 32.0 32.0 5 30.65658639036984 32.0 32.0 32.0 32.0 32.0 6 34.30703570438893 36.0 36.0 36.0 32.0 36.0 7 34.18745472889765 36.0 36.0 36.0 32.0 36.0 8 34.18002465101798 36.0 36.0 36.0 32.0 36.0 9 34.350712621984556 36.0 36.0 36.0 32.0 36.0 10 33.997961797341674 36.0 36.0 36.0 32.0 36.0 11 34.33839192764755 36.0 36.0 36.0 32.0 36.0 12 34.11510762886951 36.0 36.0 36.0 32.0 36.0 13 34.23367003799295 36.0 36.0 36.0 32.0 36.0 14 34.137735958067594 36.0 36.0 36.0 32.0 36.0 15 34.08054431245165 36.0 36.0 36.0 32.0 36.0 16 34.078646804622494 36.0 36.0 36.0 32.0 36.0 17 34.01177449882148 36.0 36.0 36.0 32.0 36.0 18 34.0171834928053 36.0 36.0 36.0 32.0 36.0 19 34.006259582494785 36.0 36.0 36.0 32.0 36.0 20 33.98438715365266 36.0 36.0 36.0 32.0 36.0 21 33.96704103260375 36.0 36.0 36.0 32.0 36.0 22 33.92393224393808 36.0 36.0 36.0 32.0 36.0 23 33.8785493346686 36.0 36.0 36.0 32.0 36.0 24 33.85472804170986 36.0 36.0 36.0 32.0 36.0 25 33.376148428230124 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 9.0 4 76.0 5 190.0 6 323.0 7 90.0 8 286.0 9 367.0 10 204.0 11 84.0 12 146.0 13 94.0 14 324.0 15 361.0 16 640.0 17 833.0 18 1151.0 19 1713.0 20 2600.0 21 3849.0 22 5735.0 23 8309.0 24 11615.0 25 16243.0 26 22501.0 27 29306.0 28 39810.0 29 52979.0 30 67985.0 31 93100.0 32 133066.0 33 189450.0 34 415503.0 35 770352.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.866195148571 17.715740928983383 11.540869062777533 25.877194859668084 2 16.1997084353141 20.20404178202196 37.87419920020329 25.722050582460643 3 18.687546878293517 24.54732019332314 28.558871646831108 28.206261281552237 4 12.45046895983478 15.968390020491913 36.29369245009443 35.28744856957887 5 14.219308822026248 36.947897551491565 34.056438833847885 14.776354792634299 6 33.504318700739574 35.58986205205991 17.464110735147877 13.44170851205265 7 29.591097092357817 30.698393018318242 21.530545928369452 18.17996396095449 8 27.624454644172054 33.455558720660015 19.98674225792841 18.933244377239518 9 27.26342434350212 14.72828947755947 18.99652306062769 39.011763118310725 10 15.594473837280923 27.460865988304516 32.33085847911621 24.61380169529835 11 36.3821194819663 21.442106841772627 22.90119224877615 19.274581427484925 12 24.232113356888643 23.997113796140155 29.629389568954988 22.14138327801621 13 29.3656171014131 20.330075569340988 25.42437790133726 24.87992942790865 14 23.158796287865073 20.022357224961677 25.829343777417595 30.989502709755655 15 24.75012184606156 27.74389296827718 23.00973161731232 24.496253568348948 16 25.056462181719052 26.101996648419888 24.69281199070898 24.148729179152078 17 23.48589661391254 26.20924999584887 26.196876960068305 24.107976430170282 18 24.168384356948184 25.26729546272648 27.09813546684036 23.466184713484974 19 24.943754017570175 25.77587315191772 25.828797943004073 23.451574887508034 20 24.997817301434686 24.987318923059206 26.13887319190875 23.875990583597357 21 25.753531496756825 24.887631150557386 24.888220380610473 24.470616972075316 22 24.993329625783968 25.398749077130955 25.284200803445234 24.32372049363984 23 23.86971622166757 25.283277430539375 25.74694650742808 25.10005984036498 24 24.12847693187881 25.816667845196843 25.71740346230739 24.33745176061695 25 24.433478749025088 25.295688096197193 25.721382534689784 24.549450620087935 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 301.0 1 301.0 2 704.5 3 1108.0 4 1108.0 5 1108.0 6 3074.5 7 5041.0 8 5041.0 9 5041.0 10 5066.0 11 5091.0 12 5091.0 13 5091.0 14 6046.5 15 7002.0 16 7002.0 17 7002.0 18 11301.0 19 15600.0 20 15600.0 21 15600.0 22 24141.0 23 32682.0 24 32682.0 25 32682.0 26 47676.0 27 62670.0 28 62670.0 29 62670.0 30 77817.5 31 92965.0 32 92965.0 33 92965.0 34 110818.5 35 128672.0 36 128672.0 37 128672.0 38 144344.5 39 160017.0 40 160017.0 41 160017.0 42 180196.5 43 200376.0 44 200376.0 45 200376.0 46 227067.0 47 253758.0 48 253758.0 49 253758.0 50 249058.5 51 244359.0 52 244359.0 53 244359.0 54 225253.5 55 206148.0 56 206148.0 57 206148.0 58 186708.5 59 167269.0 60 167269.0 61 167269.0 62 145575.5 63 123882.0 64 123882.0 65 123882.0 66 101380.5 67 78879.0 68 78879.0 69 78879.0 70 59933.0 71 40987.0 72 40987.0 73 40987.0 74 31196.5 75 21406.0 76 21406.0 77 21406.0 78 16777.5 79 12149.0 80 12149.0 81 12149.0 82 8548.5 83 4948.0 84 4948.0 85 4948.0 86 3603.0 87 2258.0 88 2258.0 89 2258.0 90 1525.5 91 793.0 92 793.0 93 793.0 94 481.5 95 170.0 96 170.0 97 170.0 98 466.5 99 763.0 100 763.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008238404445742618 2 0.003691233160754809 3 0.004921644214339745 4 0.014122979049844487 5 0.036751843209254405 6 0.0485744885502227 7 0.07061489524922243 8 0.09126440249634354 9 0.09880735721614685 10 0.12025930645473638 11 0.11951036059603252 12 0.132777401521644 13 0.12127573297726307 14 0.12496696613801789 15 0.1168355539578044 16 0.11314432079704959 17 0.12469948547419508 18 0.13085154074211977 19 0.13341935511481876 20 0.12512745453631158 21 0.13111902140594256 22 0.15150104798924086 23 0.1423532092865007 24 0.137057092142809 25 0.13170747886635276 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1869294.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.75418749502336 #Duplication Level Percentage of deduplicated Percentage of total 1 80.147844165632 46.28873619263824 2 12.345039428423853 14.259554435652944 3 3.414041836148543 5.915256369623304 4 1.3996785475579103 3.2334918907368606 5 0.7043242712715525 2.0338838010156466 6 0.41599300330609534 1.4415202745734859 7 0.27879545417351714 1.1271123453168248 8 0.20361662971465014 0.9407770407715719 9 0.14432741154474124 0.7501961148323746 >10 0.7959389474140367 8.390163897087307 >50 0.07097146590971448 2.878161325222459 >100 0.07170090098244199 8.515187623862964 >500 0.0057726765192986805 2.2710199177792516 >1k 0.00195526140169794 1.9549387708868586 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGAAGCAGTGGTATCAACG 4225 0.22602116093027635 No Hit GTATCAACGCAGAGTACTTTTTTTT 3847 0.20579962274527175 No Hit TCCATGTACTCTGCGTTGATACCAC 3579 0.191462659164369 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2729 0.14599094631449092 No Hit TATCAACGCAGAGTACTTTTTTTTT 2698 0.14433256619878948 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.069922655291249E-4 2 0.0 0.0 0.0 0.0 1.069922655291249E-4 3 0.0 0.0 0.0 0.0 1.069922655291249E-4 4 0.0 0.0 0.0 0.0 1.069922655291249E-4 5 0.0 0.0 0.0 5.349613276456245E-5 1.069922655291249E-4 6 0.0 0.0 0.0 5.349613276456245E-5 1.069922655291249E-4 7 0.0 0.0 0.0 5.349613276456245E-5 1.069922655291249E-4 8 0.0 0.0 0.0 5.349613276456245E-5 1.069922655291249E-4 9 0.0 0.0 0.0 1.6048839829368734E-4 1.069922655291249E-4 10 0.0 0.0 0.0 1.6048839829368734E-4 1.069922655291249E-4 11 0.0 0.0 0.0 2.139845310582498E-4 1.069922655291249E-4 12 0.0 0.0 0.0 2.139845310582498E-4 1.6048839829368734E-4 13 0.0 0.0 0.0 2.139845310582498E-4 2.6748066382281226E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCGTA 80 1.996852E-6 13.064342 9 CGCGTAA 80 1.9974523E-6 13.063992 10 CGCATCG 225 0.0 12.667436 13 CGTCGTA 160 0.0 12.470174 10 CGTTATT 140 5.2750693E-11 12.20783 2 GCGTTAT 140 5.2750693E-11 12.206523 1 CGGTCCA 255 0.0 11.922931 10 ACCGTCG 170 1.8189894E-12 11.736634 8 GTCCTAA 300 0.0 11.709221 1 TCGGCGT 130 2.6138878E-9 11.693017 13 GCGTAAC 100 1.9299096E-6 11.40008 11 CGGCGTC 160 4.5474735E-11 11.281631 14 GCGGTCG 135 4.7184585E-9 11.260848 9 CCGTCGT 170 1.0913936E-11 11.178046 9 CGCCGGT 230 0.0 11.153449 7 CGTAAGA 60 0.005899575 11.0774765 2 TAGACAG 235 0.0 10.914971 5 CGACCAT 175 2.0008883E-11 10.858383 10 TAGATCG 70 0.0014915572 10.857221 5 GTCTTAA 150 2.1555024E-9 10.759825 1 >>END_MODULE